IP Library Granted Patent US 12,209,113
Granted Patent B2
US 12,209,113 · App. 16/787,870 · Granted Jan 28, 2025

Methods and compositions for protection against lentiviral infections

Inventors: Matthew Gardner (Jupiter, FL); Michael Farzan (Juno Beach, FL)
Assignee: UNIVERSITY OF FLORIDA RESEARCH FOUNDATION, INCORPORATED
C07K14/70514A61P31/18C12N9/13C12Y208/0202A61K38/00C07K2319/30C07K2319/33
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,209,113
App. No.
16/787,870
Granted
Jan 28, 2025
Kind
B2
Abstract

The present invention provides methods and compositions for optimally co-expressing in a primate subject a tyrosylprotein sulfotransferase (TPST) and a lentiviral gp120-binding molecule to provide potent and long term protection against lentiviral infections.

Claims (21)

1. A method of preventing a lentiviral viral infection in a subject at risk of developing or suffering from the lentiviral infection, comprising administering to the subject a prophylactically effective amount of:

(a) a first polynucleotide sequence expressing a tyrosylprotein sulfotransferase (TPST), and

(b) a second polynucleotide sequence expressing a fusion polypeptide comprising:

(i) a CCR5 mimetic comprising SEQ ID NO: 21 that binds a gp120 protein of a primate lentivirus,

(ii) a CD4 polypeptide having at least 90% sequence identity to SEQ ID NO: 3 or SEQ ID NO: 4, and

(iii) an immunoglobulin Fc domain;

wherein the molar ratio of the first polynucleotide sequence to the second polynucleotide sequence, or the molar ratio of the TPST expressed from the first polynucleotide sequence to the fusion polypeptide expressed from the second polynucleotide sequence, is at least 1:2; thereby preventing the viral infection in the subject.

2. The method of claim 1 , wherein the first polynucleotide sequence and the second polynucleotide sequence are provided in a therapeutic composition.

3. The method of claim 1 , wherein the molar ratio is at least 1:1.

4. The method of claim 1 , wherein the first polynucleotide sequence and the second polynucleotide sequence are each present in an expression vector.

5. The method of claim 4 , wherein each of the expression vectors is independently an adeno-associated virus (AAV) vector, an adenovirus vector, a retrovirus vector, a lentivirus vector, or a herpesvirus vector.

6. The method of claim 1 , wherein the first polynucleotide sequence and the second polynucleotide sequence are both present in one expression vector.

7. The method of claim 6 , wherein the expression vector is an adeno-associated virus (AAV) vector, an adenovirus vector, a retrovirus vector, a lentivirus vector, or a herpesvirus vector.

8. The method of claim 1 , wherein the TPST is tyrosylprotein sulfotransferase 2 (TPST2) or an enzymatically active fragment thereof.

9. The method of claim 1 , wherein the fusion polypeptide binds to a coreceptor binding site on the gp120 protein.

10. The method of claim 1 , wherein the fusion polypeptide comprises an amino acid sequence that is at least 80% identical to a sequence selected from the group consisting of SEQ ID Nos: 9-11 and 16-19.

11. The method of claim 10 , wherein the fusion polypeptide is eCD4-Ig having an amino acid sequence shown in SEQ ID NO: 11.

12. The method of claim 6 , wherein the expression vector comprises a polynucleotide sequence that expresses a first polypeptide and a second polypeptide at a molar ratio of at least 1:2, wherein the first polypeptide is a tyrosine-protein sulfotransferase (TPST) 1 or TPST2, and the second polypeptide is a fusion protein comprising (i) a CCR5 mimetic comprising SEQ ID NO: 21 that binds a gp120 protein of a primate lentivirus, (ii) a CD4 polypeptide having at least 90% sequence identity to SEQ ID NO: 3 or SEQ ID NO: 4, and (iii) an immunoglobulin Fc domain.

13. The method of claim 6 , wherein the expression vector further comprises one or more expression regulatory elements to control the molar ratio, wherein the regulatory elements are selected from the group consisting of an enhancer element, an intron, an internal ribosome entry site (IRES), and a woodchuck response element (WPRE).

14. The method of claim 1 , wherein the subject is a human, and the wherein the lentiviral infection is HIV-1 infection.

15. The method of claim 1 , wherein the TPST is TPST2, and the fusion polypeptide comprises eCD4-Ig (SEQ ID NO:11), eCD4-Ig mim2 (SEQ ID NO: 16), eCD4-Ig Q40A (SEQ ID NO:17), or eCD4-Ig Q40A,mim2 (SEQ ID NO:18).

Assignments (3)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 21, 2022
From: GARDNER, MATTHEW; FARZAN, MICHAEL
To: THE SCRIPPS RESEARCH INSTITUTE
Reel/Frame 062174/0599 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 9, 2022
From: THE SCRIPPS RESEARCH INSTITUTE
To: UNIVERSITY OF FLORIDA BOARD OF TRUSTEES
Reel/Frame 061904/0730 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 8, 2022
From: UNIVERSITY OF FLORIDA BOARD OF TRUSTEES
To: UNIVERSITY OF FLORIDA RESEARCH FOUNDATION, INCORPORATED
Reel/Frame 061897/0119 →
Continuity (3)
Division 15140919 · Apr 28, 2016
Provisional Application 62153731 · Apr 28, 2015
Related Publication 20200165317A1 · May 28, 2020
References Cited (15)
US 7488481B2 · Farzan et al. · 2009 [cited by applicant]
US 10626161B2 · Gardner · 2020 [cited by examiner]
US 20040214285A1 · Glass et al. · 2004 [cited by applicant]
US 20110305670A1 · Farzan et al. · 2011 [cited by applicant]
Lavarone, C., et al., 2017, Mechanism of action of mRNA-based vaccines, Exp. Rev. Vaccines 16(9):871-881. [cited by examiner]
Balzarini, J., and L. Van Damme, 2007, Microbicide drug candidates to prevent HIV infection, The Lancet, 369:787-797. [cited by examiner]
Chiang, et al., “Enhanced Recognition and Neutralization of HIV-1 by Antibody-Derived CCR5-Mimetic Peptide Variants”, Journal of Virology 86 (22): 12417-12421 (2012). [cited by applicant]
Choe, et al., “Tyrosine Sulfation of Human Antibodies Contributes to Recognition of the CCR5 Binding Region of HIV-1 gp120”; Cell 114: 161-170 (2003). [cited by applicant]
Dorfman, et al., “A Tyrosine-sulfated Peptide Derived from the Heavy-chain CDR3 Region of an HIV-1-neutralizing Antibody Binds gp120 and Inhibits HIV-1 Infection”, Journal of Biological Chemistry 281 (39): 28529-28535 (… [cited by applicant]
Gardner, et al., “eCD4-Ig is a Highly Potent HIV Entry Inhibitor” Abstract/Poster; 2013. [cited by applicant]
Gardner, et al., “AAV-expressed eCD4-Ig provides durable protection from multile SHIV challenges”, Nature 519: 87-91 (2015). [cited by applicant]
Gardner, Matthew, 2014 Ph.D. Thesis, Targeting the CD4- and coreceptor-binding sites of the HIV-1 envelope glycoprotein, Harvard Univ. , published by ProQuest LLC. [cited by applicant]
Kwong, et al., “A Tyrosine-Sulfated CCR5-Mimetic Peptide Promotes Conformational Transitions in the HIV-1 Envelope Glycorotein”, Journal of Virology 85 (15): 7563-7571 (2011). [cited by applicant]
Quinlan, et al., “Direct Expression and Validation of Phage-selected Peptide Variants in Mammalian Cells”, Journal of Biological Chemistry 288 (26): 18803-18810 (2013). [cited by applicant]
Quinlan, et al., “A Double-Mimetic Peptide Efficiently Neutralizes HIV-1 by Bridging the CD4- and Coreceptor-Binding Sites of gp120”, Journal of Virology 88 (6): 3353-3358 (2014). [cited by applicant]