Diagnostic and therapeutic targets for leukemia
View Patent ↗The present invention relates to methods of identifying candidate compounds for the treatment of leukemia and diagnostic methods based on histone methylation and HoxA5 promoter activity.
1. A method of identifying a candidate compound for the prevention and/or treatment of leukemia, the method comprising:
contacting a DOT1L polypeptide with a CALM-AF10 fusion protein in the presence of a test compound under conditions sufficient for binding of the DOT1L polypeptide to the CALM-AF10 fusion protein; and
detecting interaction between the DOT1L polypeptide and the CALM-AF10 fusion protein,
wherein a reduction in interaction between the DOT1L polypeptide and the CALM-AF10 fusion protein in the presence of the test compound as compared with the level of interaction in the absence of the test compound indicates that the test compound is a candidate compound for the treatment of leukemia.
2. The method of claim 1 , wherein DOT1L polypeptide interaction with the CALM-AF10 fusion protein is evaluated by determining binding between the DOT1L polypeptide and CALM-AF10.
3. The method of claim 1 , wherein DOT1L polypeptide interaction with the CALM-AF10 fusion protein is evaluated by determining nuclear localization of CALM-AF10.
4. The method of claim 1 , wherein DOT1L polypeptide interaction with the CALM-AF10 fusion protein is evaluated by determining histone H3 lysine 79 (H3-K79) methylation of HoxA5.
5. The method of claim 4 , wherein the H3-K79 methylation of the HoxA5 promoter is determined.
6. The method of claim 1 , wherein DOT1L polypeptide interaction with the CALM-AF10 fusion protein is evaluated by determining HoxA5 promoter activity.
7. The method of claim 6 , wherein the HoxA5 promoter is operably associated with a heterologous nucleic acid encoding a reporter molecule, and the reporter molecule is detected.
8. The method of claim 7 , wherein the reporter molecule is a polypeptide.
9. The method of claim 8 , wherein the polypeptide is an enzyme.
10. The method of claim 1 , wherein the DOT1L polypeptide and/or CALM-AF10 fusion protein is expressed from a nucleic acid.
11. The method of claim 1 , wherein the leukemia is T cell acute lymphoid leukemia (T-ALL) or acute myeloid leukemia subtype M0/1 (AML-M0/1).
12. The method of claim 1 , wherein the DOT1L polypeptide is a mammalian DOT1L polypeptide and the CALM-AF10 fusion protein is a mammalian CALM-AF10 fusion protein.
13. The method of claim 12 , wherein the DOT1L polypeptide is a human DOT1L polypeptide and the CALM-AF10 fusion protein is a human CALM-AF10 fusion protein.