IP Library Granted Patent US 8,691,591
Granted Patent B2
US 8,691,591 · App. 13/850,154 · Granted Apr 8, 2014

Self-encoding sensor with microspheres

Inventors: David R. Walt (Lexington, MA); Todd A. Dickinson (San Diego, CA)
Assignee: Trustees of Tufts College
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Quick Facts
Patent No.
US 8,691,591
App. No.
13/850,154
Granted
Apr 8, 2014
Kind
B2
Abstract

Disclosed herein are compositions and methods for combining the output obtained from redundant sensor elements in a sensor array.

Claims (23)

1. A method of detecting an analyte, said method comprising:

(a) providing a planar array comprising a population of sensor elements at a density of at least 20,000 sensor elements per 1 mm 2 , said population of sensor elements comprising different subpopulations of redundant sensor elements, wherein analytes are bound to separate redundant sensor elements in at least one of said subpopulations of sensor elements;

(b) distinguishing signals generated from said separate redundant sensor elements that are bound to said analytes; and

(c) combining each of the signals distinguished from said separate redundant sensor elements, wherein said signals indicate the presence of said analyte, and wherein said signals comprise optical signals, or non-optical signals generated by the separate redundant sensor elements.

2. The method of claim 1 further comprising converting said optical signals to data representations of optical signals.

3. The method of claim 1 , wherein said non-optical signals comprise signals selected from the group consisting of spectroscopic signals, resonance signals and radioactive signals.

4. The method of claim 1 , further comprising converting said non-optical signals to data representations of non-optical signals.

5. The method of claim 1 , wherein sensor elements in said population of sensor elements comprise wells.

6. The method of claim 5 , wherein some but not all of the wells comprise beads.

7. The method of claim 1 , wherein a sensor element in said population of sensor elements comprises a well that includes a bead.

8. The method of claim 7 , wherein said well is adapted to include no more than one bead.

9. The method of claim 1 , wherein said combining comprises summing said signals detected at separate redundant sensor elements.

10. The method of claim 1 , further comprising performing a statistical analysis on said signals detected at separate redundant sensor elements, thereby determining statistical validity of said signals.

11. The method of claim 10 further comprising determining outlier signals and excluding said outlier signals from said statistical analysis.

12. The method of claim 1 , wherein said at least one subpopulation of redundant sensor elements comprises at least five-fold sensor redundancy.

13. The method of claim 1 , wherein said redundant sensor elements comprise nucleic acids.

14. The method of claim 1 , wherein said redundant sensor elements comprise antibodies.

15. The method of claim 1 , wherein said redundant sensor elements comprise enzymes.

16. The method of claim 1 further comprising separately combining over time a signal detected at a separate redundant sensor element.

17. The method of claim 1 , wherein said array comprises a population of sensor elements at a density of at least 50,000 sensor elements per 1 mm 2 .

18. The method of claim 1 , wherein the planar array comprises a pattern of charged groups.

19. The method of claim 1 , wherein said signals comprise optical signals generated by the separate redundant sensor elements.

20. The method of claim 1 , wherein said signals comprise non-optical signals generated by the separate redundant sensor elements.

Assignments (3)
CONFIRMATORY LICENSE Recorded Apr 3, 2017
From: TUFTS UNIVERSITY
To: NAVY, SECRETARY OF THE UNITED STATES OF AMERICA
Reel/Frame 042221/0015 →
CONFIRMATORY LICENSE Recorded Feb 7, 2017
From: TUFTS UNIVERSITY
To: NAVY, SECRETARY OF THE UNITED STATES OF AMERICA
Reel/Frame 041689/0952 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 20, 2013
From: WALT, DAVID R.; DICKINSON, TODD A.
To: TRUSTEES OF TUFTS COLLEGE
Reel/Frame 030652/0397 →
Continuity (7)
Continuation 13215749 · Aug 23, 2011
Continuation 12834422 · Jul 12, 2010
Continuation 11040504 · Jan 21, 2005
Continuation 09287573 · Apr 6, 1999
Continuation In Part 08944850 · Oct 6, 1997
Continuation In Part PCTUS9821193 · Oct 6, 1998
Related Publication 20130296186A1 · Nov 7, 2013