Multi-valent poly-Ubl chain inhibitors and methods of use
A composition used to develop a reagent for investigating Ubl-modifications in cellular functions and in the treatment of cancer is provided. The composition comprises gold nanoparticle (AuNP)-ligand conjugates that include at least two components: gold nanoparticles (AuNPs) and modified ubiquitin- or ubiquitin-like interacting motif (UIM or ULIM) mimetics. In one embodiment, the modified ULM mimetic is a modified SUMO interaction motif (SIM) mimetic. According to the embodiments described herein, the compound inhibits ubiquitin- or ubiquitin-like protein (Ubl)-mediated protein-protein interactions and sensitizes cells to ionizing radiation. The modified UIM and ULIM mimetics may be conjugated to the AuNP such that each AuNP is conjugated to a plurality of modified UIM or ULIM mimetics. The modified ULIM mimetics may be conjugated to the AuNP via a thiol group.
1. A nanoparticle attached to a plurality of peptides, wherein said peptides are each bound to a different ubiquitin-like protein in a poly-ubl chain; and wherein said peptides form part of a β sheet with each of said ubiquitin-like proteins.
2. The nanoparticle of claim 1 , wherein said peptide comprises an amino acid having a branched side chain.
3. The nanoparticle of claim 1 , wherein said amino acid is leucine, isoleucine or valine.
4. The nanoparticle of claim 1 , wherein said peptide comprises an amino acid having an aromatic side chain.
5. The nanoparticle of claim 4 , wherein said peptide comprises a tryptophan, histidine, tyrosine or phenylalanine.
6. The nanoparticle of claim 1 , wherein said peptide is bound through hydrophobic interactions to ubiquitin like protein amino acids equivalent to I33 and F31 of Sumo-3.
7. The nanoparticle of claim 1 , wherein said peptide is bound through hydrogen bonding interactions to ubiquitin like protein amino acids equivalent to K32 and K34 of Sumo-3.
8. The nanoparticle of claim 1 , wherein said peptide consists of two amino acids and a linker attaching said peptide to said nanoparticle.
9. The nanoparticle of claim 8 , wherein said nanoparticle is a metal nanoparticle and said linker comprises a sulfur atom bound to said metal nanoparticle.
10. The nanoparticle of claim 9 , wherein said linker comprises a phenyl moiety.
11. The nanoparticle of claim 10 , wherein said peptide is
wherein * represents the point of attachment of the peptide to the metal nanoparticle.
12. The nanoparticle of claim 1 , wherein said ubiquitin-like protein is a SUMO protein.