Regulation of gene expression via uORF of GDP-L-galactose phosphorylase (GGP) gene
The invention provides isolated polynucleotides comprising sequences encoding a u ORF peptides and variants and fragments thereof. The invention also provides constructs and vectors containing the polynucleotides. The invention further provides cells, plant cells and plants transformed with the polynucleotides and constructs. The invention also provides methods of using the polynucleotides to control expression of operably linked polynucleotides. The invention also provides methods of manipulating GDP-L-Galactose phosphorylase (GGP) expression and ascorbate production in plants utilizing the polynucleotides of the invention.
1. A method for producing a plant cell or plant with at least one of:
a) increased GDP-L-Galactose phosphorylase (GGP) translation,
b) increased GGP production,
c) increased GGP activity, and
d) increased ascorbate production,
the method comprising modification of the 5′-UTR of a GGP gene in the plant cell or plant, wherein the 5′UTR comprises at least one of:
i) a sequence with at least 70% identity to any one of SEQ ID NOs: 41-100, and 111-131, and
ii) a sequence encoding a polypeptide with at least 70% identity to any one of SEQ ID NOs: 1-40, 108, and 132 to 140;
wherein the modification disrupts the function of an upstream open reading frame (uORF) encoded by the 5′UTR; and wherein said modification is at least one of a deletion, an addition, or a substitution of at least one nucleotide in the 5′UTR.
2. The method of claim 1 wherein the modification is in the uORF sequence in the 5′UTR.
3. The method of claim 2 wherein the uORF has a sequence selected from any one of SEQ ID NO: 41 to 60 and 129 to 131 or a variant thereof with at least 70% identity to any one of SEQ ID NO: 41 to 60 and 129 and 131.
4. A method for selecting a plant with at least one of:
a) increased GGP translation,
b) increased GGP production,
c) increased GGP activity, and
d) increased ascorbate production,
the method comprising testing of a plant for the presence of a first polymorphism in a polynucleotide comprising a sequence encoding a polypeptide with at least 70% identity to an amino acid sequence selected from SEQ ID NO:1 to 20, and 132 to 134 in the plant, or a further polymorphism linked to the first polymorphism, wherein the first polymorphism disrupts expression of the polypeptide.
5. The method of claim 4 which includes the step of separating the selected plant from one or more of non-selected plants.
6. A method of producing ascorbate, the method comprising extracting ascorbate from a plant cell or plant produced by the method of claim 1 or selected by the method of claim 4 .
7. A plant cell or plant produced by the method of claim 1 .
8. The plant cell or plant of claim 7 with at least one of:
a) increased GGP translation,
b) increased GGP production,
c) increased GGP activity, and
d) increased ascorbate production,
wherein the plant cell or plant comprises a modification in the 5′-UTR of a GGP gene in the plant cell or plant, wherein the 5′-UTR comprises at least one of:
i) a sequence with at least 80% identity to any one of 41-100, and 111-131, and
ii) a sequence encoding a polypeptide with at least 80% identity to any one of SEQ ID NO: 1-40, 108, and 132 to 140
wherein the modification disrupts the function of a uORF encoded by the 5′-UTR, and wherein said modification is at least one of a deletion, an addition, or a substitution of at least one nucleotide in the 5′-UTR.
9. A method of producing ascorbate, the method comprising extracting ascorbate from the plant cell or plant of claim 7 .