IP Library Granted Patent US 9,670,491
Granted Patent B2
US 9,670,491 · App. 14/246,134 · Granted Jun 6, 2017

MCP-1 binding nucleic acids

Inventors: Werner Purschke (Berlin, DE); Florian Jarosch (Berlin, DE); Dirk Eulberg (Berlin, DE); Sven Klussmann (Berlin, DE); Klaus Buchner (Berlin, DE); Christian Maasch (Berlin, DE)
Assignee: NOXXON Pharma AG
C12N15/1136C12N15/115C12Q1/6813G01N33/566C12N2310/16C12N2310/351
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Quick Facts
Patent No.
US 9,670,491
App. No.
14/246,134
Granted
Jun 6, 2017
Kind
B2
Abstract

The present invention is related to a nucleic acid, preferably binding to MCP-1, selected from the group consisting of Type 1A nucleic acids, type 1B nucleic acids, Type 2 nucleic acids, Type 3 nucleic acids, Type 4 nucleic acids and nucleic acids comprising SEQ ID NOs:87-115

Claims (50)

1. An L-nucleic acid that binds MCP-1, comprising in 5′→3′ direction, a first stretch Box B1A, a second stretch Box B2A, a third stretch Box B3, a fourth stretch Box B2B, a fifth stretch Box B4, a sixth stretch Box B5A, a seventh stretch Box B6, an eighth stretch Box B5B and a ninth stretch Box B1B, wherein

a. the first stretch Box B1A and the ninth stretch Box B1B optionally hybridize with each other to form a double-stranded structure;

b. the second strand Box B2A and the fourth Box B2B optionally hybridize with each other to form a double-stranded structure;

c. the sixth stretch Box B5A and the eighth Box B5B optionally hybridize with each other to form a double-stranded structure;

d. the first stretch Box B1A comprises GURCUGC, GKSYGC, KBBSC or BNGC;

e. the second stretch Box B2A comprises GKMGU;

f. the third stretch Box B3 comprises KRRAR;

g. the fourth stretch Box B2B comprises ACKMC;

h. the fifth stretch Box B4 comprises CURYGA, CUWAUGA, CWRMGACW or UGCCAGUG;

i. the sixth stretch Box B5A comprises GGY or CWGC;

j. the seventh stretch Box B6 comprises YAGA, CKAAU or CCUUUAU;

k. the eighth stretch Box B5B comprises GCYR or GCWG; and

l. the ninth stretch Box B1B comprises GCAGCAC, GCRSMC, GSVVM or GCNV.

2. The nucleic acid according to claim 1 , wherein the third stretch Box B3 comprises GAGAA or UAAAA.

3. The nucleic acid according to claim 1 , wherein the fifth stretch Box B4 comprises CAGCGACU or CAACGACU.

4. The nucleic acid according to claim 1 , wherein the seventh stretch Box B6 comprises UAGA.

5. The nucleic acid according to claim 1 , wherein

a) the first stretch Box B1A comprises GURCUGC and the ninth stretch Box B1B comprises GCAGCAC;

b) the first stretch Box B1A comprises GKSYGC and the ninth stretch Box B1B comprises GCRSMC;

c) the first stretch Box B1A comprises KBBSC and the ninth stretch Box B1B comprises GSVVM; or

d) the first stretch Box B1A comprises BNGC and the ninth stretch Box B1B comprises GCNV.

6. The nucleic acid according to claim 1 , wherein the second stretch Box B2A comprises GKMGU and the fourth stretch Box B2B comprises ACKMC.

7. The nucleic acid according to claim 1 , wherein

a) the sixth stretch Box B5A comprises GGY and the eighth stretch Box B5B comprises GCYR; or

b) the sixth stretch Box B5A comprises CWGC and the eighth stretch Box B5B comprises GCWG.

8. The nucleic acid according to claim 1 , wherein the nucleic acid comprises one of SEQ ID NOs:56 to 61, SEQ ID NOs:67 to 71 or SEQ ID NO:73.

9. The nucleic acid according to claim 1 , wherein the nucleic acid binds eotaxin, MCP-1, MCP-2 or MCP-3.

10. The nucleic acid according to claim 1 , wherein the nucleic acid comprises a high molecular weight moiety or a modification increases residence time of said nucleic acid in an animal or a human.

11. The nucleic acid according to claim 10 , wherein the high molecular weight moiety is a HES or a PEG.

12. A pharmaceutical composition comprising the nucleic acid according to claim 1 and a pharmaceutically acceptable excipient, pharmaceutically acceptable carrier or pharmaceutically active agent.

13. A complex comprising the nucleic acid according to claim 1 and eotaxin, MCP-1, MCP-2 or MCP-3.

14. A method of screening for a chemokine antagonist or a chemokine agonist comprising the following steps:

providing a candidate chemokine antagonist or a candidate chemokine agonist,

providing a nucleic acid according to claim 1 ,

providing a test system which provides a signal in the presence of a chemokine antagonist or a chemokine agonist, and

determining whether the candidate chemokine antagonist is a chemokine antagonist or whether the candidate chemokine agonist is a chemokine agonist,

wherein the chemokine is eotaxin, MCP-1, MCP-2 or MCP-3.

15. A method of screening for a chemokine agonist or a chemokine antagonist comprising the following steps:

providing a chemokine immobilised to a phase,

providing the nucleic acid according to claim 1 , optionally which is labelled,

adding a candidate chemokine agonist or a candidate chemokine antagonist, and

determining whether the candidate chemokine agonist is a chemokine agonist or whether the candidate chemokine antagonist is a chemokine antagonist,

wherein the chemokine is eotaxin, MCP-1, MCP-2 or MCP-3.

16. A kit for detecting eotaxin, MCP-1, MCP-2or MCP-3 comprising the nucleic acid according to claim 1 .

17. A method of detecting the nucleic acid according to claim 1 ; in a sample, comprising the steps of:

a) providing a sample containing the nucleic acid according to claim 1 ;

b) providing a capture probe at least partially complementary to a first part of the nucleic acid according to claim 1 , and a detection probe partially complementary to a second part of the nucleic acid according to claim 1 , or, alternatively, the capture probe is at least partially complementary to a second part of the nucleic acid according to claim 1 and the detection probe is at least partially complementary to the first part of the nucleic acid according to claim 1 ;

c) allowing the capture probe and the detection probe to react either simultaneously or in any order sequentially with the nucleic acid according to claim 1 or part thereof to form a complex of the capture probe, detection probe and the nucleic acid of claim 1 ;

d) optionally detecting whether the capture probe is hybridized to the nucleic acid according to claim 1 of said sample; and

e) detecting the complex of step c).

Assignments (2)
CHANGE OF NAME Recorded Jan 26, 2023
From: NOXXON PHARMA AG
To: TME PHARMA AG
Reel/Frame 062489/0829 →
RELEASE OF SECURITY INTEREST Recorded Feb 7, 2020
From: KREOS CAPITAL IV (UK) LIMITED
To: NOXXON PHARMA AG
Reel/Frame 051757/0649 →
Priority Claims (2)
EP 06002935 · Feb 14, 2006 · regional
EP 06024202 · Nov 22, 2006 · regional
Continuity (3)
Division 13487341 · Jun 4, 2012
Continuation 12279183
Related Publication 20160208262A1 · Jul 21, 2016