IP Library Granted Patent US 9,902,964
Granted Patent B2
US 9,902,964 · App. 14/709,328 · Granted Feb 27, 2018

Growth arrested cells useful for producing compounds

Inventors: Gregory E. Bokinsky (Delft, NL); Jay D. Keasling (Berkeley, CA)
Assignee: The Regents of the University of California
C12N15/70C12N9/12C12N15/10C12N15/64C12N15/65C12N15/66
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Quick Facts
Patent No.
US 9,902,964
App. No.
14/709,328
Granted
Feb 27, 2018
Kind
B2
Abstract

The present invention provides for a genetically modified host cell in a growth-arrested state producing an antibiotic.

Claims (17)

1. A genetically modified host cell, comprising: (a) increased expression of a toxin of a toxin-antitoxin (TA) module, or a substantially identical polypeptide thereof, (b) increased expression of one or more enzymes of a pathway for the biosynthesis of an antibiotic that is toxic to the host cell when the host cell is growing; wherein the host cell is an Escherichia coli bacterium having an endogenous RelA.

2. The genetically modified host cell of claim 1 , wherein the toxin is HipA, or a substantially identical polypeptide thereof.

3. The genetically modified host cell of claim 1 , wherein the antibiotic is carbapenem, thienamycin, or penicillin.

4. A method of constructing a genetically modified host cell comprising (a) introducing a first vector encoding the toxin, or a substantially identical polypeptide thereof, operatively linked to a promoter capable of expressing the toxin in the host cell, one or more enzymes of a pathway for the biosynthesis of an antibiotic into a host cell; wherein the host cell is an Escherichia coli bacterium having an endogenous RelA.

5. The method of claim 4 , further comprising (b) introducing a second vector encoding the one or more enzymes of the pathway for the biosynthesis of the antibiotic into the host cell operatively linked to one or more promoters capable of expressing the enzymes in the host cell.

6. The method of claim 4 , wherein the toxin is HipA, or a substantially identical polypeptide thereof.

7. The method of claim 5 , wherein the antibiotic is carbapenem, thienamycin, or penicillin.

8. A method of producing an antibiotic comprising:

(a) providing the genetically modified host cell of claim 1 ,

(b) arresting the growth of the host cell, and

(c) producing the antibiotic.

9. The method of claim 8 , further comprising: introducing a first vector encoding the toxin, or a substantially identical polypeptide thereof, operatively linked to a promoter capable of expressing the toxin in the host cell, one or more enzymes of a pathway for the biosynthesis of an antibiotic into the host cell.

10. The method of claim 9 , further comprising: introducing a second vector encoding the one or more enzymes of the pathway for the biosynthesis of the antibiotic into the host cell operatively linked to one or more promoters capable of expressing the enzymes in the host cell.

11. The method of claim 8 , wherein the toxin is HipA, or a substantially identical polypeptide thereof.

12. The method of claim 8 , wherein the antibiotic is carbapenem, thienamycin, or penicillin.

13. The genetically modified host cell of claim 2 , wherein the substantially identical polypeptide of HipA has at least 70% sequence identity with the amino acid sequence of SEQ ID NO:1, and comprises one or more of the residues at positions 181, 309, 152-157, 234-236, 311-314, 331-314, 331-332, and 379-382 of SEQ ID NO:1.

14. The method of claim 6 , wherein the substantially identical polypeptide of HipA has at least 70% sequence identity with the amino acid sequence of SEQ ID NO:1, and comprises one or more of the residues at positions 181, 309, 152-157, 234-236, 311-314, 331-314, 331-332, and 379-382 of SEQ ID NO:1.

Assignments (3)
CONFIRMATORY LICENSE Recorded May 14, 2018
From: UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB
To: UNITED STATES DEPARTMENT OF ENERGY
Reel/Frame 045795/0698 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 27, 2015
From: BOKINSKY, GREGORY E.; KEASLING, JAY D.
To: THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
Reel/Frame 036891/0561 →
CONFIRMATORY LICENSE Recorded Jun 29, 2015
From: REGENTS OF THE UNIVERSITY OF CALIFORNIA, THE
To: ENERGY, UNITED STATES DEPARTMENT OF
Reel/Frame 036039/0879 →
Continuity (2)
Provisional Application 61991404 · May 9, 2014
Related Publication 20150353939A1 · Dec 10, 2015