Method of screening a test agent for activity to modulate an oxidative demethylation enzyme
Methods of screening a test agent for activity to modulate an oxidative demethylation enzyme are provided according to embodiments of the present invention which includes preparing a test reaction comprising an oxidative demethylation enzyme, a substrate for the oxidative demethylation enzyme, a test agent and 4-amino-3-penten-2-one under conditions which allow generation of formaldehyde by oxidative demethylation of the substrate by the enzyme in the absence of the test agent; detecting fluorescence in the test reaction, the fluorescence indicative of reaction of formaldehyde and 4-amino-3-penten-2-one in the test reaction; and comparing fluorescence detected in the test reaction with a control, wherein a difference in detected fluorescence is indicative of a change in activity of the oxidative demethylation enzyme in the presence of the test agent.
1. A method of screening a test agent for activity to modulate an oxidative demethylation enzyme, comprising:
preparing a test reaction comprising an oxidative demethylation enzyme, a substrate for the oxidative demethylation enzyme, a test agent and 4-amino-3-penten-2-one under physiological conditions, wherein the physiological conditions allow generation of formaldehyde by oxidative demethylation of the substrate by the enzyme in the absence of the test agent;
detecting fluorescence in the test reaction, the fluorescence indicative of reaction of formaldehyde and 4-amino-3-penten-2-one in the test reaction under physiological conditions; and
comparing the fluorescence detected in the test reaction with a control lacking the test agent, wherein a difference in detected fluorescence between the test reaction and the control is indicative of a change in activity of the oxidative demethylation enzyme in the presence of the test agent.
2. The method of claim 1 , wherein the oxidative demethylation enzyme is selected from the group consisting of: a histone demethylase, a DNA demethylase and a P450 enzyme having demethylase activity.
3. The method of claim 1 , wherein the oxidative demethylation enzyme is a human oxidative demethylation enzyme.
4. The method of claim 1 , further comprising:
mixing ammonium acetate, acetyl acetone and acetic acid in a solvent, the ammonium acetate added to a concentration in the range of about 0.125M-8M, inclusive, the acetyl acetone added to a concentration in the range of about 0.005M-1.6M, inclusive, and the acetic acid added to a concentration in the range of about 0.0125M-3.2M, inclusive, to produce a formaldehyde detection reagent comprising 4-amino-3-penten-2-one.
5. The method of claim 1 , wherein the oxidative demethylation enzyme is present in a sample obtained from a subject.
6. The method of claim 5 , wherein the subject is human.
7. The method of claim 1 , wherein preparing comprises preparation of a plurality of test reactions, detecting comprises detecting fluorescence in the plurality of test reactions and comparing comprises comparing fluorescence detected in the plurality of test reactions with one or more controls.