IP Library Granted Patent US 9,657,050
Granted Patent B2
US 9,657,050 · App. 14/858,404 · Granted May 23, 2017

ENA nucleic acid pharmaceuticals capable of modifying splicing of mRNA precursors

Inventors: Masafumi Matsuo (Kobe, JP); Yasuhiro Takeshima (Nishinomiya, JP); Makoto Koizumi (Tokyo, JP)
Assignees: Matsuo Masafumi; Takeshima Yasuhiro; Daiichi Sankyo Company, Limited; Orphan Disease Treatment Institute Co., Ltd.
C07H21/04C12N15/113A61K38/00A61K48/00C12N2310/11C12N2310/3231C12N2320/33
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Quick Facts
Patent No.
US 9,657,050
App. No.
14/858,404
Granted
May 23, 2017
Kind
B2
Abstract

Oligonucleotides having a nucleotide sequence complementary to nucleotide numbers such as 2571-2607, 2578-2592, 2571-2592, 2573-2592, 2578-2596, 2578-2601 or 2575-2592 of the dystrophin cDNA (Gene Bank accession No. NM_004006.1) and therapeutic agents for muscular dystrophy comprising such oligonucleotides.

Claims (29)

1. An oligonucleotide having the nucleotide sequence as shown in SEQ ID NO: 75 or 77 in the SEQUENCE LISTING, or a pharmacologically acceptable salt thereof, wherein at least one sugar constituting the oligonucleotide is modified and/or at least one phosphate constituting the oligonucleotide is modified.

2. The oligonucleotide of claim 1 , wherein the oligonucleotide has the nucleotide sequence as shown in SEQ ID NO: 75 in the SEQUENCE LISTING, or a pharmacologically acceptable salt thereof, wherein at least one sugar constituting the oligonucleotide is modified and/or at least one phosphate constituting the oligonucleotide is modified.

3. The oligonucleotide of claim 1 , wherein the oligonucleotide has the nucleotide sequence as shown in SEQ ID NO: 77 in the SEQUENCE LISTING, or a pharmacologically acceptable salt thereof, wherein at least one sugar constituting the oligonucleotide is modified and/or at least one phosphate constituting the oligonucleotide is modified.

4. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein at least one of sugar constituting the oligonucleotide is modified, the sugar constituting the oligonucleotide is D-ribofuranose, and the modification of the sugar is modification of the hydroxyl group at position 2′ of D-ribofuranose.

5. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein the modification of the sugar is 2′-O-alkylation and/or 2′-O,4′-C-alkylenation of the D-ribofuranose.

6. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein at least one of sugar constituting the oligonucleotide is modified, and said modification is selected from the group consisting of 2′-O-methylation of D-ribofuranose, 2′-O-aminoethylation of D-ribofuranose, 2′-O-propylation of D-ribofuranose, 2′-O-allylation of D-ribofuranose, 2′-O-methoxyethylation of D-ribofuranose, 2′-O-butylation of D-ribofuranose, 2′-O-pentylation of D-ribofuranose, 2′-O-propargylation of D-ribofuranose, 2′-O,4′-C-ethylenation of D-ribofuranose, 2′-O,4′-C-methylenation of D-ribofuranose, 2′-O,4′-C-propylenation of D-ribofuranose, 2′-O,4′-C-tetramethylation of D-ribofuranose, 2′-O,4′-C-pentamethylation of D-ribofuranose, 3′-deoxy-3′-amino-2′-deoxy-D-ribofuranose, and 3′-deoxy-3′-amino-2′-deoxy-2′-fluoro-D-ribofuranose.

7. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein at least one of phosphate constituting the oligonucleotide is modified and the modification of the phosphate is thioation of the phosphate group.

8. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein at least one sugar constituting the oligonucleotide is modified and at least one phosphate constituting the oligonucleotide is modified.

9. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein at least one sugar constituting the oligonucleotide is modified.

10. The oligonucleotide or a pharmacologically acceptable salt thereof according to claim 1 , wherein at least one phosphate constituting the oligonucleotide is modified.

11. An oligonucleotide having the nucleotide sequence as shown in SEQ ID NO: 23, 214, or 215 in the SEQUENCE LISTING, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated, wherein:

the oligonucleotide of SEQ ID NO: 23 has the structure of AO90 or AO91:

AO90: HO-C e2p -U mp -G mp -C e2p -U mp -U mp -C e2p -C e2p -U mp -C e2p -C e2p -A mp -A mp -C e2p -C e2p -CH 2 CH 2 OH

AO91: HO-C e2s -U ms -G ms -C e2s -U ms -U ms -C e2s -C e2s -U ms -C e2s -C e2s -A ms -A ms -C e2s -C e2s -CH 2 CH 2 OH

the oligonucleotide of SEQ ID NO: 214 has the structure of AO27, AO89, AO92, or AO93:

AO27: HO-C e2p -T e2p -G e2p -C e2p -T e2p -U mp -C mp -C mp -U mp -C mp -C e2p -A e2p -A e2p -C e2p -C e2p -CH 2 CH 2 OH

AO89: HO-C e2s -T e2s -G e2s -C e2s -T e2s -U ms -C ms -C ms -U ms -C ms -C e2s -A e2s -A e2s -C e2s -C e2s -CH 2 CH 2 OH

AO92: HO-C e2p -T e2p -G mp -C e2p -T e2p -U mp -C mp -C e2p -U mp -C mp -C e2p -A mp -A mp -C e2p -C e2p -CH 2 CH 2 OH

AO93: HO-C e2s -T e2s -G ms -C e2s -T e2s -U ms -C ms -C e2s -U ms -C ms -C e2s -A ms -A ms -C e2s -C e2s -CH 2 CH 2 OH

the oligonucleotide of SEQ ID NO: 215 has the structure of AO28:

AO28: HO-G e2p -T e2p -T e2p -A e2p -T e2p -C mp -U mp -G mp -C mp -U mp -U mp -C mp -C mp -U mp -C mp -C e2p -A e2p -A e2p -C e2p -C e2p -CH 2 CH 2 OH

wherein A e2p , G e2p , C e2p , T e2p , A mp , G mp , C mp , U mp , A e2s , G e2s , C e2s , T e2s , A ms , G ms , C ms , and U ms have the following structures:

12. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO90, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

13. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO91, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

14. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO27, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

15. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO89, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

16. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO92, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

17. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO93, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

18. The oligonucleotide of claim 11 , wherein the oligonucleotide has the nucleotide sequence AO28, or a pharmacologically acceptable salt thereof, wherein at least one D-ribofuranose constituting the oligonucleotide is 2′-O,4′-C-ethylenated.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 24, 2021
From: ORPHAN DISEASE TREATMENT INSTITUTE CO., LTD.
To: DAIICHI SANKYO COMPANY, LIMITED
Reel/Frame 057270/0430 →
INDIVIDUAL ADDRESS CHANGE Recorded Jan 8, 2016
From: MATSUO, MASAFUMI; TAKESHIMA, YASUHIRO
To: MATSUO, MASAFUMI; TAKESHIMA, YASUHIRO
Reel/Frame 037459/0888 →
Priority Claims (2)
JP 2002-340857 · Nov 25, 2002 · national
JP 2003-204381 · Jul 31, 2003 · national
Continuity (5)
Division 14258663 · Apr 22, 2014
Division 13673466 · Nov 9, 2012
Division 12847237 · Jul 30, 2010
Division 10536258
Related Publication 20160002636A1 · Jan 7, 2016