IP Library Granted Patent US 10,047,105
Granted Patent B2
US 10,047,105 · App. 15/267,978 · Granted Aug 14, 2018

Gyrase inhibitors

Inventors: Christopher J. Creighton (San Diego, CA); Leslie William Tari (San Diego, CA); Zhiyong Chen (San Diego, CA); Mark Hilgers (San Diego, CA); Thanh To Lam (San Diego, CA); Xiaoming Li (San Diego, CA); Michael Trzoss (San Diego, CA); Junhu Zhang (San Diego, CA); John Finn (San Diego, CA); Daniel Bensen (Carlsbad, CA)
Assignee: Merck Sharp & Dohme Corp.
C07D519/00C07D471/04C07D471/16C07D487/04C07D487/16C07D491/048C07D513/04
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Quick Facts
Patent No.
US 10,047,105
App. No.
15/267,978
Granted
Aug 14, 2018
Kind
B2
Abstract

Novel gyrase inhibitors and related compositions and methods are useful for impeding bacterial growth. Compounds of Formula (I), are disclosed: Formula (I), wherein Y is N or CH; Z is N or CR 5 ; R 5 is H, a substituted or unsubstituted hydrocarbyl residue (1-3C) containing 0-2 heteroatoms selected from O, S and N, or is an inorganic residue; L is O, S, NR 7 , or CR 8 R 9 ; R 7 is H or C 1-3 alkyl; R 8 and R 9 are each independently H or C 1-3 alkyl; R 2 is H, a hydrocarbyl residue (1-40C) containing 0-10 heteroatoms selected from O, S and N optionally substituted with an inorganic residue; R 4 is H, an inorganic residue, or a hydrocarbyl residue (1-30C) containing 0-12 heteroatoms selected from O, S and N and containing 0-10 inorganic residues, wherein R 5 and R 4 together may join to form a fused ring; and R 6 is selected from the group consisting of H, C 1-5 alkyl, C 2-5 alkenyl, C 2-5 alkynyl, halo C 1-5 alkyl, halo C 2-5 alkenyl, halo C 2-5 alkynyl, C 1-5 hydroxyalkyl, C 1-5 alkyl chloride, C 2-5 alkenyl chloride, and C 2-5 alkynyl chloride; or a pharmaceutically-acceptable salt, ester, or prodrug thereof.

Claims (34)

1. A compound having the structure of Formula I

wherein

Y is N;

Z is CR 5 ;

R 5 is methyl, C(O)CH 3 , C(O)NH 2 , CH 2 OH, CF 3 , CN, CHF 2 , CHO, Cl or Br;

L is O, S, NR 7 , SO 2 , or CR 8 R 9 ;

R 7 is H or C 1-3 alkyl;

R 8 and R 9 are each independently H or C 1-3 alkyl;

R 2 is H, COOCH 2 CH 3 , CH 3 , CH 2 CH 3 or a hydrocarbyl residue (1-40C) containing 0-10 heteroatoms selected from O, S and N optionally substituted with an inorganic residue wherein the hydrocarbyl residue comprises at least one aryl or heteroaryl moiety;

R 4 is

a) an inorganic residue selected from the group consisting of H, halo, NH 2 , SH, SO 2 H, NHOH, SO 3 H, SO 2 NH 2 , and NHSO 2 NH 2 ,

b) an aryl C5-14 or heteroaryl C1-14 moiety substituted with 0-10 substituents selected from alkyl, alkenyl, alkynyl, aryl, arylalkyl, acyl, aroyl, heteroaryl, heteroalkyl, heteroalkenyl, heteroalkynyl, haloalkyl, haloalkenyl, haloalkynyl, heteroalkylaryl, NH-aroyl, arylacyl, heteroarylacyl, halo, —O, OR′, NR′ 2 , SR′, SOR′, SO 2 R′, OCOR′, N-alkyl-OR′, CONR′OR′, NR′COR′, NR′CONR′ 2 , NR′COOR′, OCONR′ 2 , OR′, NR′ 2 , COOR′, alkyl-OOR′, SO 3 R′, CONR′ 2 , CONR′ 2 OH, SO 2 NR′ 2 , NR′SO 2 NR′ 2 , CN, CF 3 , or NO 2 , wherein each R′ is independently H, alkyl, alkenyl or aryl or heteroforms thereof, and wherein two of said substituents on adjacent positions can be joined to form a fused, optionally substituted aromatic or nonaromatic, saturated or unsaturated ring which contains 3-14 members, and said substituents can only be —O if R 4 contains N,

c) alkyl, alkenyl, alkynyl, heteroalkyl, heteroalkenyl, heteroalkynyl, alkylaryl, alkenylaryl, alkynylaryl, heteroalkylaryl, heteroalkenylaryl, or heteroalkynylaryl moiety substituted with 0-10 substituents selected from the group consisting of aryl, haloaryl, arylalkyl, arylalkenyl, arylalkynyl, haloaryl, heteroaryl, heteroarylalkyl, heteroarylalkenyl, heteroarylalkynyl, acyl, aroyl, NH-aroyl, arylacyl, heteroarylacyl, halo, —O, ═O, ═NH, OR″, NR″ 2 , SR″, SOR″, SO 2 R″, OCOR″, CONR″OR″, NR″COR″, NR″CONR″ 2 , NR″COOR″, NR″COCOOR″, OCONR″ 2 , COOR″, SO 3 R″, CONR″ 2 , CONR″ 2 OH, SO 2 NR″ 2 , NR″SO 2 R″, NR″SO 2 NR″ 2 , CN, CF 3 , or NO 2 , wherein each R″ is independently H, optionally substituted alkyl, alkenyl, alkynyl, aryl, heteroalkyl, heteroalkenyl, heteroalkynyl, heteroaryl, or halo forms thereof, and wherein two of said substituents on adjacent positions can be joined to form a fused, optionally substituted aromatic or nonaromatic, saturated or unsaturated ring which contains 3-14 members, and said substituents can only be —O if R 4 contains N, or

d) OR″′, NR″′ 2 , or OSO 2 R″′, wherein R″′ is an aryl C5-14 or heteroaryl C1-14, moiety substituted with 0-10 substituents selected from alkyl, alkenyl, alkynyl, aryl, arylalkyl, acyl, aroyl, heteroaryl, heteroalkyl, heteroalkenyl, heteroalkynyl, haloalkyl, haloalkenyl, haloalkynyl, heteroalkylaryl, NH-aroyl, arylacyl, heteroarylacyl, halo, —O, OR′, NR′ 2 , SR′, SOR′, SO 2 R′, OCOR′, N-alkyl-OR′, CONR′OR′, NR′COR′, NR′CONR′ 2 , NR′COOR′, OCONR′ 2 , COOR′, alkyl-OOR′, SO 3 R′, CONR′ 2 , CONR′ 2 OH, SO 2 NR′ 2 , NR′SO 2 NR′ 2 , CN, CF 3 , or NO 2 , wherein each R′ is independently H, alkyl, alkenyl or aryl or heteroforms thereof, and wherein two of said substituents on adjacent positions can be joined to form a fused, optionally substituted aromatic or nonaromatic, saturated or unsaturated ring which contains 3-14 members, and said substituents can only be —O if R 4 contains N,

optionally wherein R 5 and R 4 together join to form a fused ring; and

R 6 is ethyl;

or a pharmaceutically-acceptable salt thereof.

2. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein

Y is N; and

L is O, S, NH, SO 2 or CH 2 .

3. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein Z is CR 5 , wherein R 5 is selected from the group consisting of Cl, Br, and methyl.

4. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein R 2 comprises at least one aryl or heteroaryl moiety.

5. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein the at least one aryl or a heteroaryl moiety of R 2 is directly linked to L.

6. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein the aryl or heteroaryl moiety of R 2 comprises at least one moiety selected from the group consisting of phenyl, pyrido[2,3-b]pyrazine, pyridyl, thiazole, quinoline, pyridazine, pyrimidinedione, pyrido[2,3-d]pyrimidinedione, pyrimidine, [1,2,3]triazolo[4,5-b]pyridine, oxazole, benzotriazine, furo[3,2-b]pyridine, thiazolo[5,4-b]pyridine, pyrazolo[3,4-b]pyridine, imidazo[4,5-b]pyridine, pyrido[3,2-d]pyrimidine, 1,5-naphthyridine, quinolone, quinazoline, and quinoxoline.

7. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein L-R 2 is selected from the group consisting of

8. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein R 4 is selected from the group consisting of

9. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein R 4 is

10. A compound which is

or a pharmaceutically acceptable salt thereof.

11. A pharmaceutical composition comprising the compound of claim 1 or a pharmaceutically acceptable salt thereof.

12. A pharmaceutical composition comprising the compound of claim 10 , or a pharmaceutically acceptable salt thereof.

13. A method of making a compound of claim 1 , or a pharmaceutically acceptable salt thereof, comprising deprotecting a protected form of a compound of Formula I wherein Z is C-halo.

14. The method of claim 13 comprising, before the deprotecting step, halogenating a protected form of the compound of Formula I wherein Z is CH to form a compound of Formula I, or a pharmaceutically acceptable salt thereof, wherein Z is C-halo.

15. A method of claim 13 comprising halogenating a compound of Formula I or a pharmaceutically acceptable salt thereof, wherein Z is CH to form a compound of Formula I, wherein Z is C-halo.

Assignments (1)
MERGER Recorded Aug 8, 2022
From: MERCK SHARP & DOHME CORP.
To: MERCK SHARP & DOHME LLC
Reel/Frame 061102/0145 →
Continuity (3)
Division 13394985
Provisional Application 61241833 · Sep 11, 2009
Related Publication 20170037059A1 · Feb 9, 2017