Cyclodextrin glucanotransferase
The present invention relates to a novel cyclodextrin glucanotransferase (CGTase) enzyme which is obtainable from Clostridium saccharoperbutylacetonicum N1-4, N1-4(HMT) or N1-504. The invention further relates to nucleic acids encoding the enzyme, vectors and host cells, and uses of the CGTase.
1. A method of producing a solvent comprising the steps:
(i) incubating a recombinant host cell comprising a heterologous nucleic acid molecule which is integrated into the host cell genome, wherein the nucleotide sequence of the heterologous nucleic acid molecule:
(a) encodes the amino acid sequence set forth in SEQ ID NO: 1 or 3;
(b) encodes a cyclodextrin glucanotransferase (CGTase) having at least 80% amino acid sequence identity with SEQ ID NO: 1 or 3;
(c) is set forth in SEQ ID NO: 2 or 4; or
(d) has at least 80% sequence identity with the nucleotide sequence set forth in SEQ ID NO: 2 or 4, and which encodes a CGTase,
wherein the host cell is neither Clostridium saccharoperbutylacetonicum N1-4 (HMT) nor Clostridium saccharoperbutylacetonicum N1-504, with a polysaccharide substrate;
wherein the host cell is capable of converting hydrolysed polysaccharide to an acid R—COOH, and wherein the host cell is further capable of converting the R—COOH into a solvent.
2. The method as claimed in claim 1 , wherein the solvent is selected from the group consisting of acetone, ethanol and/or butanol.
3. The method as claimed in claim 1 , wherein the host cell is a bacterial cell.
4. The method as claimed in claim 3 , wherein the bacterial cell is of the genus Clostridium or Bacillus.
5. The method as claimed in claim 3 , wherein the host cell is a biphasic bacteria.
6. The method as claimed in claim 4 , wherein the host cell is selected from the group consisting of C. acetobutylicum, C. aurantibutyricum, C. beijerinckii, C. thermocellum, C. thermobutyricum, C. pasteurianum, C. kluyveri, C. saccharobutylicum, C. thermosaccharolyticum, C. saccharolyticum, C. saccharoperbutylacetonicum, C. tyrobutyricum, C. butyricum, C. puniceum, C. diolis and C. roseum ; or the host cell is a Cluster I Clostridia.
7. A method of producing a solvent comprising the steps:
(i) incubating a host cell comprising a nucleic acid molecule which is integrated into the host cell genome, wherein the nucleotide sequence of the nucleic acid molecule:
(a) encodes the amino acid sequence set forth in SEQ ID NO: 1 or 3;
(b) encodes a cyclodextrin glucanotransferase (CGTase) having at least 80% amino acid sequence identity with SEQ ID NO: 1 or 3;
(c) is set forth in SEQ ID NO: 2 or 4; or
(d) has at least 80% sequence identity with the nucleotide sequence set forth in SEQ ID NO: 2 or 4, and which encodes a CGTase,
wherein the nucleic acid molecule is operably associated with a constitutive promoter, with a polysaccharide substrate;
wherein the host cell is capable of converting hydrolysed polysaccharide to an acid R—COOH, and wherein the host cell is further capable of converting the R—COOH into a solvent.
8. The method as claimed in claim 7 , wherein the solvent is selected from the group consisting of acetone, ethanol and/or butanol.
9. The method as claimed in claim 7 , wherein the host cell is a bacterial cell.
10. The method as claimed in claim 9 , wherein the bacterial cell is of the genus Clostridium or Bacillus.
11. The method as claimed in claim 9 , wherein the host cell is a biphasic bacteria.
12. The method as claimed in claim 10 , wherein the host cell is selected from the group consisting of C. acetobutylicum, C. aurantibutyricum, C. beijerinckii, C. thermocellum, C. thermobutyricum, C. pasteurianum, C. kluyveri, C. saccharobutylicum, C. thermosaccharolyticum, C. saccharolyticum, C. saccharoperbutylacetonicum, C. tyrobutyricum, C. butyricum, C. puniceum, C. diolis and C. roseum ; or the host cell is a Cluster I Clostridia.
13. A method of producing a solvent comprising the steps:
(i) incubating a host cell comprising two or more nucleic acid molecules which are integrated into the host cell genome, wherein the nucleotide sequence of the nucleic acid molecules:
(a) encodes the amino acid sequence set forth in SEQ ID NO: 1 or 3;
(b) encodes a cyclodextrin glucanotransferase (CGTase) having at least 80% amino acid sequence identity with SEQ ID NO: 1 or 3;
(c) is set forth in SEQ ID NO: 2 or 4; or
(d) has at least 80% sequence identity with the nucleotide sequence set forth in SEQ ID NO: 2 or 4, and which encodes a CGTase,
with a polysaccharide substrate;
wherein the host cell is capable of converting hydrolysed polysaccharide to an acid R—COOH, and wherein the host cell is further capable of converting the R—COOH into a solvent.
14. The method as claimed in claim 13 , wherein the solvent is selected from the group consisting of acetone, ethanol and/or butanol.
15. The method as claimed in claim 13 , wherein the host cell is a bacterial cell.
16. The method as claimed in claim 15 , wherein the bacterial cell is of the genus Clostridium or Bacillus.
17. The method as claimed in claim 15 , wherein the host cell is a biphasic bacteria.
18. The method as claimed in claim 16 , wherein the host cell is selected from the group consisting of C. acetobutylicum, C. aurantibutyricum, C. beijerinckii, C. thermocellum, C. thermobutyricum, C. pasteurianum, C. kluyveri, C. saccharobutylicum, C. thermosaccharolyticum, C. saccharolyticum, C. saccharoperbutylacetonicum, C. tyrobutyricum, C. butyricum, C. puniceum, C. diolis and C. roseum ; or the host cell is a Cluster I Clostridia.