Use of galerina marginata genes and proteins for peptide production
The present invention relates to compositions and methods comprising genes and peptides associated with cyclic peptides and cyclic peptide production in mushrooms. In particular, the present invention relates to using genes and proteins from Galerina species encoding peptides specifically relating to amatoxins in addition to proteins involved with processing cyclic peptide toxins. In a preferred embodiment, the present invention also relates to methods for making small peptides and small cyclic peptides including peptides similar to amanitin. Further, the present inventions relate to providing kits for making small peptides.
1. A cell comprising a recombinant prepropeptide nucleic acid encoding a proline-containing peptide operably linked to a promoter, and a heterologous fungal prolyl oligopeptidase nucleic acid encoding an amino acid sequence selected from the group consisting of SEQ ID NO: 236, 237, 348, 716, and 722.
2. The cell of claim 1 , which is a prokaryotic cell.
3. The cell of claim 1 , which is a eukaryotic cell.
4. The cell of claim 1 , which is an insect cell.
5. The cell of claim 1 , which is a mammalian cell.
6. A bacterial, fungal, or algal organism comprising a cell comprising a recombinant prepropeptide nucleic acid encoding a proline-containing peptide operably linked to a promoter, and a heterologous fungal prolyl oligopeptidase nucleic acid encoding an amino acid sequence selected from the group consisting of SEQ ID NO: 236, 237, 348, 716, and 722.
7. The organism of claim 6 , which is a eukaryotic organism.
8. The organism of claim 6 , which is a fungus.
9. A method of making a synthetic cyclized peptide, comprising:
a) providing,
i) a cell comprising a fungal prolyl oligopeptidase with an amino acid sequence selected from the group consisting of SEQ ID NOs: 236, 237, 348, 716, and 722;
ii) a recombinant prepropeptide nucleic acid comprising a nucleic acid sequence encoding a proline-containing prepropeptide, and
iii) amino acids for making the synthetic cyclized peptide; and
b) growing the cell under conditions for expressing said prepropeptide and thereby making the synthetic cyclized peptide.
10. The method of claim 9 , wherein the amino acids for making the synthetic cyclized peptide comprise D-amino acids.
11. The method of claim 9 , wherein the peptide is at least six amino acids in length.
12. The method of claim 9 , wherein the peptide is up to fifteen amino acids in length.
13. The method of claim 9 , wherein the peptide is a bicyclic peptide.
14. A method of making a peptide from a recombinant prepropeptide sequence, comprising:
(a) providing a fungal prolyl oligopeptidase comprising an amino acid sequence selected from SEQ ID NO: 236, 237, 348, 716, and 722, and a proline-containing prepropeptide; and
(b) amino acids for making the synthetic cyclized peptide comprising D-amino acids; and
(c) contacting the fungal prolyl oligopeptidase with the prepropeptide and the amino acids to make the peptide.
15. The method of claim 14 , wherein the peptide is at least six amino acids in length.
16. The method of claim 14 , wherein the peptide is up to fifteen amino acids in length.
17. The method of claim 14 , wherein the peptide is a bicyclic peptide.
18. A composition comprising a proline-containing prepropeptide, amino acids for making a synthetic cyclized peptide comprising D-amino acids, and a fungal prolyl oligopeptidase comprising an amino acid sequence with in a sequence selected from amino acid SEQ ID NO: 236, 237, 348, 716, and 722, or optionally a fungal prolyl oligopeptidase comprising an amino acid sequence with a sequence selected from amino acid SEQ ID NO: 236, 237, 348, 716, and 722 with one amino acid change.