IP Library Granted Patent US 11,542,261
Granted Patent B2
US 11,542,261 · App. 16/804,518 · Granted Jan 3, 2023

Substituted Imidazo[1,2-a]-pyridines as IRAK 1/4 and FLT3 inhibitors

Inventors: Daniel T. Starczynowski (Cincinnati, OH); Craig J. Thomas (Gaithersburg, MD); Garrett Rhyasen (Burlington, MA); Katelyn Melgar (Cincinnati, OH); Morgan MacKenzie Walker (New haven, CT); Jian-kang Jiang (Columbia, MD)
Assignees: CHILDREN'S HOSPITAL MEDICAL CENTER; THE UNITED STATES OF AMERICA, AS REPRESENTED BY THE SECRETARY, DEPT. OF HEALTH AND HUMAN SERVICES
C07D471/04A61K31/496
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Quick Facts
Patent No.
US 11,542,261
App. No.
16/804,518
Granted
Jan 3, 2023
Kind
B2
Abstract

Some embodiments of the invention include inventive compounds (e.g., compounds of Formula (I)) and compositions (e.g., pharmaceutical compositions) which can be used for treating, for example, certain diseases. Some embodiments include methods of using the inventive compound (e.g., in compositions or in pharmaceutical compositions) for administering and treating (e.g., diseases such as head and neck squamous cell carcinoma (HNSCC), cancer, blood disorders, etc.). Additional embodiments provide synergistic combinations of a BCL2 inhibitor with an IRAK inhibiting compound, and methods of using same.

Claims (77)

1. A method for treating a disease or disorder in an individual, wherein the method comprises administering to the individual in need thereof a therapeutically effective amount of:

(i) a composition comprising a B-cell lymphoma 2 (BCL2) inhibitor:

wherein the BCL2 inhibitor is selected from the group consisting of:

apogossypol;

gossypol;

obatoclax;

navitoclax;

venetoclax, or a salt thereof;

2-(8-(benzo[d]thiazol-2-ylcarbamoyl)-3,4-dihydroisoquinolin-2(1H)-yl)-5-(3-(4-(3-(dimethylamino)prop-1-yn-1-yl)-2-fluorophenoxy)propyl)thiazole-4-carboxylic acid (A-1155463);

1,1′,6,6′,7,7′-hexahydroxy-5,5′-diisopropyl-3,3′-dimethyl-[2,2′-binaphthalene]-8,8′-dicarbaldehyde (AT-101);

4-[4-[[2-(4-chlorophenyl)phenyl]methyl]piperazin-1-yl]-N-[4-[[(2R)-4-(dimethylamino)-1-phenylsulfanylbutan-2-yl]amino]-3-nitrophenyl]sulfonylbenzamide (AT-737);

(E)-3-((9-amino-7-ethoxyacridin-3-yl)diazenyl])pyridine-2,6-diamine (BXI-61);

2′-(4-ethoxyphenyl)-5-(4-methylpiperazin-1-yl)-1H, 1′H-2,5′-bibenzo[d]imidazole (BXI-72);

ethyl 2-amino-6-bromo-4-(1-cyano-2-ethoxy-2-oxoethyl)-4H-chromene-3-carboxylate (HA14-1);

(2R,3S,6S,7R,8R)-8-butyl-3-(3-formamido-2-methoxybenzamido)-2,6-dimethyl-4,9-dioxo-1,5-dioxonan-7-yl 3-methylbutanoate (2-methoxy antimycin A3);

4-((E)-(((Z)-2-(cyclohexylimino)-4-methylthiazol-3(2H)-yl)imino)methyl)benzene-1,2,3-triol (MIM1);

1-oxo-6-thiomorpholino-1H-phenalene-2,3-dicarbonitrile (S1);

N-[4-(2-tert-butylphenyl)sulfonylphenyl]-2,3,4-trihydroxy-5-[(2-propan-2-ylphenyl)methyl]benzamide (TW37);

2-((4-((4-bromophenyl)sulfonamido)-1-hydroxynaphthalen-2-yl)thio)acetic acid (UMI-77); and

5-[3-[4-(aminomethyl)phenoxy]propyl]-2-[8-[2-(2-benzothiazolyl)hydrazinylidene]-5,6,7,8-tetrahydro-2-naphthalenyl]-4-thiazolecarboxylic acid (WEHI-539),

or a combination thereof; and

(ii) a composition comprising an interleukin receptor-associated kinase (IRAK) inhibiting compound of Formula (I):

or a pharmaceutically acceptable salt or stereoisomer thereof,

wherein:

R 1 is H, halogen, C 1 -C 7 alkyl, C 2 -C 7 alkenyl, C 2 -C 7 alkynyl, OH, or C 1 -C 6 alkoxy, wherein the C 1 -C 7 alkyl, C 2 -C 7 alkenyl, C 2 -C 7 alkynyl or C 1 -C 6 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, SO 3 H, and morpholinyl;

R 2 is H, halogen, CN, C 1 -C 7 alkyl, C 2 -C 7 alkenyl, C 2 -C 7 alkynyl, C(O)H, C(O)OH, OH, C 1 -C 6 alkoxy, cycloalkyl, heterocyclyl, aryl, or heteroaryl, wherein the C 1 -C 7 alkyl, C 2 -C 7 alkenyl, C 2 -C 7 alkynyl, C(O)H, C(O)OH, OH, C 1 -C 6 alkoxy, cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, C 1 -C 3 alkyl, C 1 -C 3 perfluorinated alkyl, C≡CH, CH 2 C≡CH, C≡CCH 3 , C(O)H, C(O)NH 2 , C(O)N(CH 3 ) 2 , C(O)OH, C(O)-morpholin-4-yl, NH 2 , N(CH 3 ) 2 , OH, C 1 -C 3 alkoxy, SO 3 H, heterocyclyl, aryl, and heteroaryl;

R 3 is H, halogen, C 1 -C 3 alkyl, C 2 -C 3 alkenyl, C 2 -C 3 alkynyl, OH, or C 1 -C 2 alkoxy, wherein the C 1 -C 3 alkyl, C 2 -C 3 alkenyl, C 2 -C 3 alkynyl or C 1 -C 2 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H;

R 4 is H, halogen, CN, NO 2 , C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl C(O)H, C(O)OH, OH, C 1 -C 3 alkoxy, or SO 3 H, wherein the C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl or C 1 -C 3 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H;

R 5 is H, halogen, CN, NO 2 , C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl C(O)H, C(O)OH, OH, C 1 -C 3 alkoxy, or SO 3 H, wherein the C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl or C 1 -C 3 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H;

R 6 is H, halogen, CN, NO 2 , C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl C(O)H, C(O)OH, OH, C 1 -C 3 alkoxy, or SO 3 H, wherein the C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl or C 1 -C 3 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H;

R 7 is

R 8 is H, CN, NO 2 , C 1 -C 4 alkyl, C 2 -C 4 alkenyl, C 2 -C 4 alkynyl, C(O)H, C(O)CH 3 , C(O)CH 2 CN, C(O)-phenyl, C(O)OH, or phenyl-CH 3 ;

Y is —NH—, —N(CH 3 )—, —N(CH 2 CH 3 )—, —N(CH 2 CH 2 CH 3 )—, —N[CH(CH 3 ) 2 ]—, or —O—;

m is 0, 1, 2, 3, 4, or 5; and

n is 0, 1, 2, 3, 4, or 5;

with the proviso that the sum of m and n is at least 1;

wherein the disease or disorder is selected from the group consisting of acute myeloid leukemia and a myelodysplastic syndrome, or a combination thereof.

2. The method of claim 1 , wherein the composition comprising a B-cell lymphoma 2 (BCL2) inhibitor and the composition comprising an interleukin receptor-associated kinase (IRAK) inhibiting compound are coformulated into one composition.

3. The method of claim 1 , wherein the composition comprising a B-cell lymphoma 2 (BCL2) inhibitor and the composition comprising an interleukin receptor-associated kinase (IRAK) inhibiting compound are coadministered as one composition.

4. The method of claim 1 , wherein the B-cell lymphoma 2 (BCL2) inhibitor is venetoclax, or a salt thereof.

5. The method of claim 1 , wherein the amount of the interleukin receptor-associated kinase (IRAK) inhibiting compound of Formula (I) in the composition is in the range of 0.005 mg/kg body weight of the individual to 50 mg/kg body weight of the individual.

6. The method of claim 1 , wherein R 1 is H, halogen, C 1 -C 7 alkyl, OH, or C 1 -C 6 alkoxy, wherein the C 1 -C 7 alkyl or C 1 -C 6 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, SO 3 H, and morpholinyl.

7. The method of claim 6 , wherein R 1 is Cl, CH 3 , OCH 3 , or OCH 2 CH 2 -morpholinyl.

8. The method of claim 1 , wherein R 2 is H, halogen, CN, C 1 -C 7 alkyl, C(O)H, C(O)OH, OH, C 1 -C 6 alkoxy, cycloalkyl, heterocyclyl, aryl, or heteroaryl, wherein the C 1 -C 7 alkyl, C(O)H, C(O)OH, OH, C 1 -C 6 alkoxy, cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, C 1 -C 3 alkyl, C 1 -C 3 perfluorinated alkyl, C≡CH, CH 2 C≡CH, C≡CCH 3 , C(O)H, C(O)NH 2 , C(O)N(CH 3 ) 2 , C(O)OH, C(O)-morpholin-4-yl, NH 2 , N(CH 3 ) 2 , OH, C 1 -C 3 alkoxy, SO 3 H, heterocyclyl, aryl, and heteroaryl.

9. The method of claim 1 , wherein R 2 is Cl, CN, CH 3 , CF 3 , CF 2 CF 3 , C≡CH, C(O)NH 2 , C(O)N(CH 3 ) 2 , C(O)-morpholin-4-yl, OCH 3 , OCH 2 CH 3 , OCH 2 CH 2 -morpholinyl, 4-ethylpiperazin-1-yl, 1H-pyrrol-3-yl, pyrazol-3-yl, 1H-pyrazol-4-yl, 1-methylpyrazol-4-yl, 1-(morpholin-4-yl)pyrazol-4-yl, 3,5-dimethylpyrazol-4-yl, 3,5-dimethylisoxazol-4-yl, tetrazol-5-yl, pyridin-3-yl, pyridin-4-yl, or 2-methoxypyridin-5-yl.

10. The method of claim 1 , wherein R 3 is H, halogen, C 1 -C 3 alkyl, OH, or C 1 -C 2 alkoxy, wherein the C 1 -C 3 alkyl or C 1 -C 2 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H.

11. The method of claim 10 , wherein R 3 is H or OCH 3 , wherein the OCH 3 is optionally substituted with one, two, or three independently selected halogen substituents.

12. The method of claim 1 , wherein:

R 4 is H, halogen, CN, NO 2 , C 1 -C 4 alkyl, C(O)H, C(O)OH, OH, C 1 -C 3 alkoxy, or SO 3 H, wherein the C 1 -C 4 alkyl or C 1 -C 3 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H;

R 5 is H, halogen, CN, NO 2 , C 1 -C 4 alkyl, C(O)H, C(O)OH, OH, C 1 -C 3 alkoxy, or SO 3 H, wherein the C 1 -C 4 alkyl or C 1 -C 3 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H; and

R 6 is H, halogen, CN, NO 2 , C 1 -C 4 alkyl, C(O)H, C(O)OH, OH, C 1 -C 3 alkoxy, or SO 3 H, wherein the C 1 -C 4 alkyl or C 1 -C 3 alkoxy is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, CH 3 , CH 2 CH 3 , C≡CH, C(O)H, C(O)OH, OH, and SO 3 H.

13. The method of claim 1 , wherein:

(i) R 4 is F, Cl, Br, CH 3 , CF 3 , or OCH 3 ; or

(ii) R 5 is F, Cl, Br, CH 3 , CH 2 CH 3 , or OCH 3 ; or

(iii) R 6 is F, Cl, Br, CH 3 , CF 3 , or OCH 3 , or any combination thereof.

14. The method of claim 1 , wherein R 7 is:

15. The method of claim 1 , wherein R 8 is H, C≡CH, C(O)CH 3 , C(O)CH 2 CN, or C(O)-phenyl.

16. The method of claim 1 , wherein Y is —NH—, —N(CH 3 )—, —N(CH2CH 3 )—, —N(CH 2 CH 2 CH 3 )—, or —N[CH(CH 3 ) 2 ]—.

17. The method of claim 1 , wherein:

(i) m is 1, 2, or 3; or

(ii) n is 1, 2, or 3,

or any combination thereof.

18. The method of claim 1 , wherein:

R 1 is H;

R 2 is F, Br, I, C 1 -C 7 alkyl, C 2 -C 7 alkenyl, C 2 -C 7 alkynyl, C(O)H, C(O)OH, OH, C 2 -C 6 alkoxy, cycloalkyl, heterocyclyl, aryl, or heteroaryl, wherein the C 1 -C 7 alkyl, C 2 -C 7 alkenyl, C 2 -C 7 alkynyl, C(O)H, C(O)OH, C 2 -C 6 alkoxy, cycloalkyl, heterocyclyl, aryl, or heteroaryl is optionally substituted with one or more substituents independently selected from the group consisting of halogen, NO 2 , CN, C 1 -C 3 alkyl, C 1 -C 3 perfluorinated alkyl, C≡CH, CH 2 C≡CH, C≡CCH 3 , C(O)H, C(O)NH 2 , C(O)N(CH 3 ) 2 , C(O)OH, C(O)-morpholin-4-yl, NH 2 , N(CH 3 ) 2 , OH, C 1 -C 3 alkoxy, SO 3 H, heterocyclyl, aryl, and heteroaryl;

R 3 is H;

R 4 is H;

R 5 is H;

R 6 is H;

R 7 is

R 8 is H;

Y is —NH—;

m is 0, 1, 2, 3, 4, or 5; and

n is 0, 1, 3, 4, or 5;

with the proviso that the sum of m and n is at least 1.

19. The method of claim 1 , wherein the compound, or a stereoisomer thereof, is selected from the group consisting of:

or a pharmaceutically acceptable salt thereof.

Assignments (4)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 27, 2021
From: THOMAS, CRAIG
To: THE UNITED STATES OF AMERICA, AS REPRESENTED BY THE SECRETARY, DEPARTMENT OF HEALTH AND HUMAN SERVICES
Reel/Frame 056047/0514 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 27, 2021
From: THOMAS, CRAIG J.; WALKER, MORGAN MCKENZIE; JIANG, JIAN-KANG
To: THE UNITED STATES OF AMERICA, AS REPRESENTED BY THE SECRETARY, DEPARTMENT OF HEALTH AND HUMAN SERVICES
Reel/Frame 056047/0632 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 26, 2021
From: STARCZYNOWSKI, DANIEL
To: CHILDREN'S HOSPITAL MEDICAL CENTER
Reel/Frame 056039/0285 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 26, 2021
From: STARCZYNOWSKI, DANIEL; RHYASEN, GARRETT; MELGAR, KATELYN
To: CHILDREN'S HOSPITAL MEDICAL CENTER
Reel/Frame 056039/0612 →
Continuity (6)
Continuation In Part 16326571
Provisional Application 62375965 · Aug 17, 2016
Provisional Application 16804518 · Feb 28, 2020
Provisional Application 62812948 · Mar 1, 2019
Related Publication 20200199123A1 · Jun 25, 2020
Related Publication 20220306621A9 · Sep 29, 2022
Cited By (5)
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