IP Library Granted Patent US 12,648,959
Granted Patent B2
US 12,648,959 · App. 17/893,918 · Granted Jun 9, 2026

Amino acid- , peptide- and polypeptide-lipids, isomers, compositions, and uses thereof

Inventors: Yizhou Dong (Dublin, OH); Kevin Thomas Love (Boston, MA); Robert S. Langer (Newton, MA); Daniel Griffith Anderson (Framingham, MA); Delai Chen (Cambridge, MA); Yi Chen (Cambridge, MA); Arturo Jose Vegas (Belmont, MA); Akinleye C. Alabi (Ithaca, NY); Yunlong Zhang (Cambridge, MA)
Assignee: Massachusetts Institute of Technology
A61K31/7105A61K31/711A61K47/22C07C229/12C07C229/22C07C229/24C07C229/26C07C229/36C07C237/08C07C237/12C07C271/22C07C279/14C07C323/58C07D207/16C07D209/20C07D209/24C07D233/64C07D241/08C07D265/32C07D403/06C07D413/06C07D487/04C07D487/06C12N15/87C12N15/88C12Q1/025G01N33/15A61K2121/00Y02A50/30
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Quick Facts
Patent No.
US 12,648,959
App. No.
17/893,918
Granted
Jun 9, 2026
Kind
B2
Abstract

Described herein are compounds and compositions characterized, in certain embodiments, by conjugation of various groups, such as lipophilic groups, to an amino or amide group of an amino acid, a linear or cyclic peptide, a linear or cyclic polypeptide, or structural isomer thereof, to provide compounds of the present invention, collectively referred to herein as “APPLs”. Such APPLs are deemed useful for a variety of applications, such as, for example, improved nucleotide delivery. Exemplary APPLs include, but are not limited to, compounds of Formula (I), (II), (III), (IV), (V), and (VI), and salts thereof, as described herein: wherein m, n, p, R′, R 1 , R 2 , R 3 , R 4 , R 5 , R 8 , Z, W, Y, and Z are as defined herein.

Claims (59)

1 . A method of delivering an agent to a subject or a cell, the method comprising contacting with the cell or administering to the subject a composition comprising the agent and a compound of formula (III):

or a salt thereof;

wherein:

p is 1;

each instance of Q is O;

each instance of R 1 is independently hydrogen, alkyl, or a group of formula (iv);

provided at least one instance of R 1 is a group of formula (iv):

L is alkylene;

R 6 and R 7 are each independently hydrogen, alkyl, a nitrogen protecting group, or a group of formula (i), (ii), or (iii);

each instance of R 2 is independently hydrogen, alkyl, a nitrogen protecting group, or a group of formula (i), (ii), or (iii);

formulae (i), (ii), and (iii) are:

wherein each instance of formula (i) is independently formula (i-a) or (i-b):

each instance of R′ is independently hydrogen or alkyl;

X is O, S, or NR X , wherein R X is hydrogen or a nitrogen protecting group;

Y is O;

R P is hydrogen, alkyl, or an oxygen protecting group when attached to an oxygen atom; and

R L is C 6-50 alkyl,

provided that at least one instance of R 2 , R 6 , or R 7 is a group of the formula (i), (ii), or (iii);

wherein each alkyl and alkylene is independently unsubstituted or substituted at one or more positions with a group selected from halogen, —CN, —NO 2 , —OH, —OR aa , —N(R bb ) 2 , —N(R bb ) 3 + X − , —N(OR cc )R bb , —SH, —SR aa , —C(═O)R aa , —CO 2 H, —CHO, —C(OR) 2 , —CO 2 R aa , —OC(═O)R aa , —OCO 2 R aa , —C(═O)N(R bb ) 2 , —OC(═O)N(R bb ) 2 , —NR bb C(═O)R aa , —NR bb CO 2 R aa , —NR bb C(═O)N(R bb ) 2 , —C(═NR bb )R aa , —C(═NR bb )OR aa , —OC(═NR bb )R aa , —OC(═NR bb )OR aa , —C(═NR bb )N(R bb ) 2 , —OC(═NR bb )N(R bb ) 2 , —NR bb C(═NR bb )N(R bb ) 2 , C 3-14 carbocyclyl, 3-14 membered heterocyclyl, C 6-14 aryl, and 5-14 membered heteroaryl, wherein each alkyl, carbocyclyl, heterocyclyl, aryl, and heteroaryl is independently substituted with 0, 1, 2, 3, 4, or 5 groups selected from halogen, —OH, —OR ee , and C 1-50 alkyl;

or two geminal hydrogens on a carbon atom are replaced with the group ═O;

each instance of R aa is, independently, selected from C 1-50 alkyl;

each instance of R bb is, independently, selected from hydrogen and C 1-50 alkyl;

each instance of R ee is, independently, selected from C 1-50 alkyl and C 3-10 carbocyclyl; and

X − is a counterion.

2 . The method of claim 1 , wherein each instance of R 1 is a group of formula (iv).

3 . The method of claim 1 , wherein the compound is selected from the group consisting of:

and salts thereof, wherein:

R 1 is selected from the group consisting of H, —CH 3 , —CH(CH 3 ) 2 , —CH(CH 3 )(CH 2 CH 3 ), —CH 2 CH(CH 3 ) 2 ,

provided at least one R 1 is a group of formula:

4 . The method of claim 1 , wherein the compound is selected from the group consisting of:

and salts thereof.

5 . The method of claim 1 , wherein the compound is selected from the group consisting of:

and salts thereof.

6 . The method of claim 5 , wherein the compound is:

or a salt thereof.

7 . The method of claim 5 , wherein the compound is:

or a salt thereof.

8 . The method of claim 1 , wherein X is NR X , wherein R X is hydrogen or a nitrogen protecting group.

9 . The method of claim 1 , wherein X is O.

10 . The method of claim 1 , wherein the composition is a pharmaceutical composition.

11 . The method of claim 1 , wherein the agent is an organic molecule, inorganic molecule, small molecule, nucleic acid, protein, peptide, or polynucleotide.

12 . The method of claim 11 , wherein the agent is a polynucleotide.

13 . The method of claim 12 , wherein the polynucleotide is RNA.

14 . The method of claim 13 , wherein the RNA is RNAi, dsRNA, siRNA, shRNA, miRNA, or antisense RNA.

15 . The method of claim 12 , wherein the polynucleotide encodes a protein or peptide.

16 . The method of claim 15 , wherein the encoded protein is pharmaceutically active.

17 . The method of claim 12 , wherein the polynucleotide comprises a sequence encoding an antigenic protein or peptide.

18 . The method of claim 17 , wherein the antigenic protein or peptide is an antigen of a virus.

19 . The method of claim 18 , wherein the virus is selected from the group consisting of influenza A, influenza B, and respiratory syncytial viruses.

20 . The method of claim 17 , wherein administration of the composition to the subject induces an immunologic response sufficient to decrease the chance of a subsequent infection and/or lessen the symptoms associated with such an infection.

21 . The method of claim 12 , wherein the polynucleotide is capable of fixing an error in the genome of the cell or the subject.

22 . The method of claim 12 , wherein the polynucleotide is chemically or biologically modified.

23 . The method of claim 13 , wherein upon delivery of the RNA, the RNA is able to interfere with the expression of a specific gene in a biological cell.

24 . The method of claim 12 , wherein the polynucleotide is DNA.

25 . The method of claim 1 , wherein the subject has been diagnosed with a disease or disorder.

26 . The method of claim 25 , wherein the disease, disorder, or condition is selected from the group consisting of proliferative disorders, inflammatory disorders, autoimmune disorders, painful conditions, liver diseases, and familial amyloid neuropathies.

27 . The method of claim 25 , wherein the disease, disorder, or condition is cancer, liver disease, or an infection.

28 . The method of claim 1 , wherein the agent is a targeting agent, an isotopically labeled chemical compound, vaccine, or immunological agent.

29 . The method of claim 18 , wherein the virus is selected from the group consisting of smallpox, influenza A and B, respiratory syncytial virus, parainfluenza, measles, HIV, varicella-zoster, herpes simplex 1 and 2, cytomegalovirus, Epstein-Barr virus, rotavirus, rhinovirus, adenovirus, papillomavirus, poliovirus, mumps, rabies, rubella, coxsackieviruses, equine encephalitis, Japanese encephalitis, yellow fever, Rift Valley fever, and hepatitis A, B, C, D, and E virus.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 10, 2023
From: DONG, YIZHOU; LOVE, KEVIN THOMAS; LANGER, ROBERT S.; ANDERSON, DANIEL GRIFFITH; CHEN, DELAI; CHEN, YI; VEGAS, ARTURO JOSE; ALABI, AKINLEYE; ZHANG, YUNLONG
To: MASSACHUSETTS INSTITUTE OF TECHNOLOGY
Reel/Frame 062948/0084 →
Continuity (6)
Continuation 16867291 · May 5, 2020
Continuation 16126897 · Sep 10, 2018
Division 15340082 · Nov 1, 2016
Division 13662002 · Oct 26, 2012
Provisional Application 61552423 · Oct 27, 2011
Related Publication 20230124955A1 · Apr 20, 2023
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