IP Library Granted Patent US 7,045,309
Granted Patent B2
US 7,045,309 · App. 10/332,314 · Granted May 16, 2006

9-substituted adenine derivatives as prodrug regulators of cell and tissue function

Assignee: The Research Foundation of State University of New York
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Quick Facts
Patent No.
US 7,045,309
App. No.
10/332,314
Granted
May 16, 2006
Kind
B2
Abstract

The present invention relates to 9-substituted adenine derivatives represented by formula (I) wherein W is selected from the group consisting of H, halogen, azido and amino group; X is selected from the group consisting of O, S, N(H), CH 2 , CH and C; Y is selected from the group consisting of H, hydroxy, C 1-4 alkyl, C 1-4 alkoxy and halogen; R is selected from the group consisting of H, hydroxymethyl, C 1-4 alkyl, and C 1-4 alkoxy; R 1 is selected from the group consisting of O, NH and CH 2 ; R 2 represents a radical selected from the group consisting of —(CH 2 ) n —S—C(O)—R 4 and —(CH 2 ) n —S—S—R 4 , where n=1-4 and R 4 is a C 1-4 -alkyl or aryl group and R 4 is optionally substituted with a halogen, amino, N-alkylamino, N, N-dialkylamino or C 1-4 alkoxy group and wherein each of the R 2 radicals may be the same or different; and R 3 is O or S. The derivatives are useful as prodrugs for inhibiting adenylyl cyclase and lowering 3′:5′-cAMP in cells, thereby inhibiting adenylyl cyclase dependent effects within cells.

Claims (108)

1. A compound represented by formula (I)

wherein W is selected from the group consisting of H, halogen, azido and amino group;

X is selected from the group consisting of O, S, N(H), CH 2 and CH;

Y is selected from the group consisting of H, hydroxy, C 1-4 alkyl, C 1-4 alkoxy and halogen;

R is selected from the group consisting of H, hydroxymethyl, C 1-4 alkyl, and C 1-4 alkoxy;

R 1 is selected from the group consisting of O, NH and CH 2;

R 2 represents a radical selected from the group consisting of —(CH 2 ) n —S—C(O)—R 4 and —(CH 2 ) n —S—S—R 4 , where n=1-4 and R 4 is a C 1-4 alkyl or aryl group and R 4 is optionally substituted with a halogen, amino, N-alkylamino, N,N-dialkylamino or C 1-4 alkoxy group and wherein each of the R 2 radicals may be the same or different;

R 3 is O or S; and

when X is CH the ring so formed is unsaturated and when X is CH 2 the ring so formed is saturated.

2. The compound of claim 1 where W is a hydrogen atom, and R 2 represents a radical selected from the group consisting of —CH 2 —CH 2 —S—C(O)—R 4 and —CH 2 —CH 2 —S—S—R 4 , where R 4 is a C 1-4 alkyl or aryl group.

3. The compound of claim 2 where R 4 is a radical selected from the group consisting of methyl, tent-butyl and phenyl.

4. The compound of claim 1 where R is selected from the group consisting of H, hydroxymethyl, methyl and methoxy.

5. The compound of claim 1 where Y is selected from the group consisting of H, hydroxymethyl and methoxy.

6. The compound of claim 1 wherein X is O, Y is hydroxy, R is hydroxymethyl and R 1 is O.

7. The compound of claim 1 where X is S.

8. The compound of claim 1 where X is N(H).

9. The compound of claim 1 where X is CH 2 .

10. A compound selected from the group consisting of:

2′,5′-dideoxy-β-(L)-adenosine 3′-bis(S-acetyl-2-thioethyl)-monophosphate;

2′,5′-dideoxy-β-(D)-adenosine 3′-bis(S-acetyl-2-thioethyl)-monophosphate;

2′-deoxy-β-(L)-adenosine 3′-bis(S-acetyl-2-thioethyl)-monophosphate;

2′-deoxy-β-(D)-adenosine 3′-bis(S-acetyl-2-thioethyl)-monophosphate;

2′,5′-dideoxy-β-(L)-adenosine 3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

2′,5′-dideoxy-β-(D)-adenosine 3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

2′-deoxy-β-(L)-adenosine 3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

2′-deoxy-β-(D)-adenosine 3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

2′,5′-dideoxy-β-(L)-adenosine 3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

2′,5′-dideoxy-β-(D)-adenosine 3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

2′-deoxy-β-(L)-adenosine 3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

2′-deoxy-β-(D)-adenosine 3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

2′,5′-dideoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

2′,5′-dideoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

2′-deoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

2′-deoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

2′,5′-dideoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

2′,5′-dideoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

2′-deoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

2′-deoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

2′,5′-dideoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

2′,5′-dideoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

2′-deoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

2′-deoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

2′,5′-dideoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

2′,5′-dideoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

2′-deoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

2′-deoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

2′,5′-dideoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-N-phosphoramidate;

2′,5′-dideoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-N-phosphoramidate;

2′-deoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-N-phosphoramidate;

2′-deoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-N-phosphoramidate;

2′,5′-dideoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate;

2′,5′-dideoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate;

2′deoxy-β-(L)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate; and

2′-deoxy-β-(D)-adenosine 3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate.

11. A compound selected from the group consisting of:

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-bis(S-acetyl-2-thioethyl)-monophosphate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-bis(S-acetyl-2-thioethyl)-monophosphate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl-methylenephosphonate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-N-phosphoramidate

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-pivaloyl)-2-thioethyl)-N-phosphoramidate

9-(tetrahydrofuryl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate; and

9-(tetrahydrofuryl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate.

12. A compound selected from the group consisting of:

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-bis(S-acetyl-2-thioethyl)-monophosphate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-bis(S-acetyl-2-thioethyl)-monophosphate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-bis(S-pivaloyl-2-thioethyl)-monophosphate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-bis(S-benzoyl-2-thioethyl)-monophosphate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-methylenephosphonate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-methylenephosphonate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-methylenephosphonate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

9-(cyclopentyl)-(1′R,3′R)adenine-3′-deoxy-3′-bis(S-acetyl-2-thioethyl)-N-phosphoramidate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-pivaloyl-2-thioethyl)-N-phosphoramidate;

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate;

9-(cyclopentyl)-(1′R,3′S)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate; and

9-(cyclopentyl)-(1′R,3′R)-adenine-3′-deoxy-3′-bis(S-benzoyl-2-thioethyl)-N-phosphoramidate.

13. A composition comprising a compound of claim 1 and an acceptable excipient.

14. A method for reducing adenylyl cyclase activity in intact cells and tissues comprising:

a) selecting a compound from claim 1 ; and

b) contacting the compound with cells or tissues that contain adenylyl cyclase for a period of time and under such conditions such that the adenylyl cyclase activity is reduced.

15. The method of claim 14 further comprising assessing the reduction of adenylyl cyclase activity by assay for 3′:5′-cAMP.

16. The method of claim 15 wherein the assay for 3′:5′-cAMP is a biochemical means of measuring tissue levels of 3′:5′-cAMP selected from the group consisting of protein kinase binding assays, radioimmunoassays, ELISA and fluorometric assays.

17. The method of claim 15 wherein the assay for 3′:5′-cAMP is selected from the group consisting of measuring the formation of 3′:5′-cAMP in cells prelabeled with adenine and contacting intact cells with a fluorescent indicator that responds to changes in cell 3′:5′-cAMP levels.

18. A method for reducing adenylyl cyclase activity in intact cells and tissues comprising:

a) selecting a compound from claim 10 ; and

b) contacting the compound with cells or tissues that contain adenylyl cyclase for a period of time and under such conditions such that the adenylyl cyclase activity is reduced.

19. A method for reducing adenylyl cyclase activity in intact cells and tissues comprising:

a) selecting a compound from claim 11 ; and

b) contacting the compound with cells or tissues that contain adenylyl cyclase for a period of time and under such conditions such that the adenylyl cyclase activity is reduced.

20. A method for reducing adenylyl cyclase activity in intact cells and tissues comprising:

a) selecting a compound from claim 12 ; and

b) contacting the compound with cells or tissues that contain adenylyl cyclase for a period of time and under such conditions such that the adenylyl cyclase activity is reduced.

Assignments (6)
CHANGE OF NAME Recorded Apr 4, 2016
From: THE RESEARCH FOUNDATION OF STATE UNIVERSITY OF NEW YORK
To: THE RESEARCH FOUNDATION FOR THE STATE UNIVERSITY OF NEW YORK
Reel/Frame 038337/0539 →
CHANGE OF NAME Recorded Mar 31, 2016
From: THE RESEARCH FOUNDATION OF STATE UNIVERSITY OF NEW YORK
To: THE RESEARCH FOUNDATION FOR THE STATE UNIVERSITY OF NEW YORK
Reel/Frame 038317/0848 →
CHANGE OF NAME Recorded Dec 16, 2014
From: THE RESEARCH FOUNDATION OF STATE UNIVERSITY OF NEW YORK
To: THE RESEARCH FOUNDATION FOR THE STATE UNIVERSITY OF NEW YORK
Reel/Frame 034642/0864 →
CONFIRMATORY LICENSE Recorded May 15, 2008
From: THE RESEARCH FOUNDATION OF STATE UNIVERSITY OF NEW YORK
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 020952/0681 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 7, 2003
From: JOHNSON, ROGER A.; PANDE, PRAVEEN; LAUX, WOLFGANG; GOSSELIN, GILLES
To: NEW YORK, THE RESEARCH FOUNDATION OF STATE UNIVERSITY OF
Reel/Frame 014308/0791 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 7, 2003
From: JOHNSON, ROGER A.; PANDE, PRAVEEN; LAUX, WOLFGANG; GOSSELIN, GILLES
To: RESEARCH FOUNDATION OF STATE UNIVERSITY OF NEW YORK, THE
Reel/Frame 013857/0919 →
Continuity (2)
Provisional Application 6021686900 · Jul 7, 2000
Related Publication 20040053825A1 · Mar 18, 2004