Coupling agents comprising a photolabile protecting group and uses thereof, such as for the functionalisation of solid supports
View Patent ↗The invention relates to compounds comprising a photolabile protecting group and to the use thereof as coupling agents for the functionalisation of solid supports. The invention also relates to the solid supports functionalised by said compounds and to the use of same for the immobilisation of biological molecules of interest, such as nucleic acid molecules.
1. A coupling agent of formula (I) below:
A—X—B—Proc (I)
in which:
A represents a function for attachment to a solid support, said function being chosen from functions of amine, phosphoramidite, silane and activated ester type;
X represents a spacer arm;
B is a reactive function chosen from groups that result, after photodeprotection, in a function of the type oxyamine (—ONH 2 ) and derivatives or hydrazide (—NH—NH 2 ) and derivatives, said function B being protected with a Proc group;
Proc is a photolabile protecting group of formula (II) below:
in which:
R 1 and R 2 , which may be identical or different, represent a hydrogen atom or a C 1 -C 4 alkyl radical.
2. The coupling agent as claimed in claim 1 , characterized in that the spacer arm X is an uncharged hydrophobic chain or an uncharged hydrophilic chain.
3. The coupling agent as claimed in claim 2 , characterized in that the spacer arm X is chosen from saturated hydrocarbon-based chains containing from 1 to 13 carbon atoms, and glycol ethers in which the carbon-based chain contains from 4 to 12 carbon atoms.
4. The coupling agent as claimed in claim 1 , characterized in that R 1 and R 2 , independently of one another, represent an alkyl radical chosen from methyl and ethyl radicals.
5. The coupling agent as claimed in claim 1 , characterized in that it is chosen from those in which:
i) A represents a phosphoramidite function,
X represents a saturated hydrocarbon-based chain having 6 carbon atoms,
B represents an oxyamine function (—ONH—), and
R 1 and R 2 represent a hydrogen atom or a methyl radical;
ii) A represents a tri(C 1 -C 4 ) alkoxysilane,
X represents a saturated hydrocarbon-based chain having from 2 to 12 carbon atoms,
B represents an oxyamine function (—ONH—), and
R 1 and R 2 represent a hydrogen atom or a methyl radical;
iii) A represents a carboxylic function esterified with N-hydroxysuccinimide, or pentafluorobenzene,
X represents —CH 2 —,
B represents an oxyamine function (—ONH—), and
R 1 and R 2 represent a hydrogen atom or a methyl radical.
6. The coupling agent as claimed in claim 5 , characterized in that the compounds ii) are chosen from compounds in which the function A is triethoxysilane and X is a saturated hydrocarbon-based chain having 3 or 11 carbon atoms.
7. A method for the functionalization of sold supports comprising the steps of using at least one coupling agent of formula (I) below:
A—X—B—Proc (I)
in which:
A represents a function for attachment to a solid support, said function being chosen from functions of amine, phosphoramidite, silane and activated ester type;
X represents a spacer arm;
B is a reactive function chosen from groups that result, after photodeprotection, in a function of the type oxyamine (—ONH 2 ) and derivatives or hydrazide (—NH—NH 2 ) and derivatives, said function B being protected with a Proc group;
Proc is a photolabile protecting group of formula (II) below:
in which:
R 1 and R 2 , which may be identical or different, represent a hydrogen atom or a C 1 -C 4 alkyl radical.
8. A process for preparing a functionalized solid support, characterized in that it comprises at least one step of bringing at least one surface of a solid support into contact with a solution, in an organic solvent, of at least one coupling agent of formula (I) as defined in claim 1 .
9. The process as claimed in claim 8 , characterized in that the bringing into contact of the solid support with the solution of coupling agent of formula (I) is carried out at a temperature of between 4 and 80° C. for 1 to 48 hours.
10. The process as claimed in claim 8 , characterized in that the solid support is chosen from supports made of glass, ceramics, silicon or plastic, said supports comprising at least one hydrated, hydroxylated, silanized or aminated surface or a surface of activated ester type.
11. The process as claimed in claim 8 , characterized in that the support has at least one planar or nonplanar, smooth or structured surface, and is in the form of a glass slide, a planar plastic plate or a plastic plate with wells, a capillary tube or a porous or nonporous bead.
12. A solid support characterized in that it comprises at least one surface functionalized with one or more coupling agents of formula (I) as defined in claim 1 .
13. A process for immobilizing biological molecules of interest on a solid support, the solid support comprising at least one surface functionalized with one or more coupling agents of formula (I) below:
A—X—B—Proc (I)
in which:
A represents a function for attachment to a solid support, said function being chosen from functions of amine, phosphoramidite, silane and activated ester type;
X represents a spacer arm;
B is a reactive function chosen from groups that result, after photodeprotection, in a function of the type oxyamine (—ONH 2 ) and derivatives or hydrazide (—NH—NH 2 ) and derivatives, said function B being protected with a Proc group;
Proc is a photolabile protecting group of formula (II) below:
in which:
R 1 and R 2 , which may be identical or different, represent a hydrogen atom or a C 1 -C 4 alkyl radical
characterized in that it comprises at least a first step of photo-deprotection of the reactive functions B of the compounds of formula (I) by exposure of at least a part of the surface of the solid support, followed by bringing the solid support thus activated into contact with a solution of biological molecules of interest, so as to result in the immobilization of said molecules through the formation of a covalent bond between at least one chemical function that is carried by said molecules and that is reactive with respect to the reactive functions B of said compounds of formula (I), on said solid support, and the optional repetition of these two steps.
14. The process as claimed in claim 13 , characterized in that the photo-deprotection step is localized on only a part of the functionalized surface of the solid support.
15. The process as claimed in claim 13 , characterized in that the immobilization step is carried out through the formation of oxime bonds between the oxyamine functions B of the compounds of formula (I) and carbonylated functions of the biological molecules of interest.
16. The process as claimed in claim 15 , characterized in that the immobilization step is carried out at a pH of between 4 and 7.
17. The process as claimed in claim 14 , characterized in that the exposure wavelength is between 300 and 400 nm.