IP Library Granted Patent US 8,106,039
Granted Patent B2
US 8,106,039 · App. 12/112,748 · Granted Jan 31, 2012

Metal complex phosphatidyl-inositol-3-kinase inhibitors

Assignees: The Trustees Of The University Of Pennsylvania; The Wistar Institute Of Anatomy And Biology
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Quick Facts
Patent No.
US 8,106,039
App. No.
12/112,748
Granted
Jan 31, 2012
Kind
B2
Abstract

Provided are novel organometallic compounds that inhibit PI3K lipid kinase and phospho-AKT in human melanoma cells, and also inhibit the migration of melanoma cells. The present invention is also directed to methods for inhibiting cancer cell proliferation, migration or both comprising contacting a cancer cell with a disclosed organometallic kinase inhibitor. Also disclosed are methods for treating a kinase-affected disease or condition comprising administering to a subject in need thereof a therapeutically effective amount of a disclosed organometallic kinase inhibitor.

Claims (77)

1. A compound of formula I

or a pharmaceutically acceptable salt thereof, wherein:

X 1 , X 2 , X 3 , X 4 , X 5 , and X 6 are each independently N, C, S, O, B, or Si;

R 1 and R 2 are taken together to form a mono-, bi- or tricyclic, carbo- or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

R 3 and R 4 are taken together to form a mono-, bi- or tricyclic, carbo-, or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

M is Ru, Pt, Tc, Re, Os, Rh, Ir, Pd, Au, Cu, Fe, Co, or Cr;

Q is straight or branched chain C 1 -C 6 alkyl or alkenyl, optionally substituted with halo, hydroxyl, nitro, trifluoromethyl, C 1 -C 4 straight or branched chain alkyl or alkenyl, C 1 -C 4 alkoxy, C 1 -C 4 alkenyloxy, phenoxy, benzyloxy, or amino;

A and A′ are each independently hydrogen, hydroxy, hydroxymethyl, C 1 -C 6 straight or branched chain alkyl, C 2 -C 6 straight or branched chain alkenyl, O—(C 1 -C 6 straight or branched chain alkyl), or O—(C 2 -C 6 straight or branched chain alkenyl), or

A and A′ are taken together as ═O;

L 1 is a monodentate ligand capable of acting as a ligand for said metal M, a bidentate ligand capable of acting as a ligand for said metal M, or a tridentate ligand capable of acting as a ligand for said metal M; and,

L 2 is cyclopentadienylamido.

2. The compound according to claim 1 wherein L 1 is selected from the group consisting of halo, hydroxy, carbonyl, amine, nitro, sulfhydryl, pyridine, thiolate, histidine, methionine, cysteine, dimethylsulfoxide, substituted or unsubstituted pyridines, substituted or unsubstituted amines, substituted or unsubstituted diamines, substituted or unsubstituted thiols, substituted or unsubstituted dithiols, substituted or unsubstituted imidazoles, substituted or unsubstituted pyrazoles, substituted or unsubstituted benzimidazoles, substituted or unsubstituted 1,4-dienes, substituted or unsubstituted 2-(aminomethyl)pyridines, substituted or unsubstituted 2-iminopyridines, substituted bipyridines, substituted or unsubstituted phenanthrolines, substituted or unsubstituted 8-hydroxyquinolines, substituted or unsubstituted 6-mercaptopurines, and substituted or unsubstituted phosphines.

3. The compound according to claim 1 , wherein said X 1 , X 2 , X 3 , X 4 , X 5 , and X 6 are each independently selected from the group consisting of N and C.

4. The compound according to claim 1 , wherein said M is Ru or Pt.

5. The compound according to claim 1 , wherein said R 1 and R 2 are taken together to form a monocyclic 5 or 6 membered ring, or a bicyclic indene, indene derivative, naphthalene, or naphthalene derivative ring, and

wherein said ring is carbocyclic or heterocyclic.

6. The compound according to claim 1 , wherein said R 3 and R 4 are taken together to form a monocyclic 5 or 6 membered ring, or a bicyclic indene, indene derivative, naphthalene, or naphthalene derivative ring, and

wherein said ring is carbocyclic or heterocyclic.

7. The compound according to claim 1 , wherein said compound is of formula II

or a pharmaceutically acceptable salt thereof, wherein:

X 3 and X 4 are each independently N or C;

R 5 is halo, hydroxyl, carbonyl, nitro, amino, C 1 -C 4 alkoxy, C 1 -C 4 alkyl-OH, C 1 -C 4 alkyl-OH, NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, or benzyloxy;

R 6 is fluoro, hydroxyl, amino, trifluoroalkyl, chloroform, substituted or unsubstituted C 1 -C 6 straight or branched alkyl-OH, substituted or unsubstituted C 1 -C 6 straight or branched alkyl-NH 2 , or any other hydrogen bond donor or acceptor; and,

M is Ru or Pt.

8. The compound according to claim 7 , wherein said compound is of formula III

or a pharmaceutically acceptable salt thereof.

9. The compound according to claim 8 wherein:

L 1 is —C≡O + .

10. The compound according to claim 8 wherein R 6 is fluorine.

11. The compound according to claim 8 wherein Q is methyl.

12. The compound according to claim 8 wherein said compound is of formula IV

13. A pharmaceutical composition comprising a compound of formula I

or a pharmaceutically acceptable salt thereof, wherein:

X 1 , X 2 , X 3 , X 4 , X 5 , and X 6 are each independently N, C, S, O, B, or Si;

R 1 and R 2 are taken together to form a mono-, bi- or tricyclic, carbo- or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

R 3 and R 4 are taken together to form a mono-, bi- or tricyclic, carbo-, or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

M is Ru, Pt, Tc, Re, Os, Rh, Ir, Pd, Au, Cu, Fe, Co, or Cr;

Q is straight or branched chain C 1 -C 6 alkyl or alkenyl, optionally substituted with halo, hydroxyl, nitro, trifluoromethyl, C 1 -C 4 straight or branched chain alkyl or alkenyl, C 1 -C 4 alkoxy, C 1 -C 4 alkenyloxy, phenoxy, benzyloxy, or amino;

A and A′ are each independently hydrogen, hydroxy, hydroxymethyl, C 1 -C 6 straight or branched chain alkyl, C 2 -C 6 straight or branched chain alkenyl, O—(C 1 -C 6 straight or branched chain alkyl), or O—(C 2 -C 6 straight or branched chain alkenyl), or

A and A′ are taken together as ═O;

L 1 is a monodentate ligand capable of acting as a ligand for said metal M, a bidentate ligand capable of acting as a ligand for said metal M, or a tridentate ligand capable of acting as a ligand for said metal M; and,

L 2 is cyclopentadienylamido.

14. The pharmaceutical composition according to claim 13 comprising a compound of formula II

or a pharmaceutically acceptable salt thereof, wherein:

X 3 and X 4 are each independently N or C;

R 5 is halo, hydroxyl, carbonyl, nitro, amino, C 1 -C 4 alkoxy, C 1 -C 4 alkyl-OH, C 1 -C 4 alkyl-OH, NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, or benzyloxy;

R 6 is fluoro, hydroxyl, amino, trifluoroalkyl, chloroform, substituted or unsubstituted C 1 -C 6 straight or branched alkyl-OH, substituted or unsubstituted C 1 -C 6 straight or branched alkyl-NH 2 , or any other hydrogen bond donor or acceptor; and,

M is Ru or Pt.

15. The pharmaceutical composition according to claim 14 comprising a compound of formula III

or a pharmaceutically acceptable salt thereof.

16. The pharmaceutical composition according to claim 15 wherein:

L 1 is —C≡O + .

17. The pharmaceutical composition according to claim 15 wherein R 6 is fluorine.

18. The pharmaceutical composition according to claim 15 wherein Q is methyl.

19. The pharmaceutical composition according to claim 15 wherein said compound is of formula IV

20. A method for inhibiting melanoma cell proliferation, migration, or both comprising contacting a melanoma cell with a compound of formula I:

or a pharmaceutically acceptable salt thereof, wherein:

X 1 , X 2 , X 3 , X 4 , X 5 , and X 6 are each independently N, C, S, O, B, or Si;

R 1 and R 2 are taken together to form a mono-, bi- or tricyclic, carbo- or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

R 3 and R 4 are taken together to form a mono-, bi- or tricyclic, carbo-, or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

M is Ru, Pt, Tc, Re, Os, Rh, Ir, Pd, Au, Cu, Fe, Co, or Cr;

Q is straight or branched chain C 1 -C 6 alkyl or alkenyl, optionally substituted with halo, hydroxyl, nitro, trifluoromethyl, C 1 -C 4 straight or branched chain alkyl or alkenyl, C 1 -C 4 alkoxy, C 1 -C 4 alkenyloxy, phenoxy, benzyloxy, or amino;

A and A′ are each independently hydrogen, hydroxy, hydroxymethyl, C 1 -C 6 straight or branched chain alkyl, C 2 -C 6 straight or branched chain alkenyl, O—(C 1 -C 6 straight or branched chain alkyl), or O—(C 2 -C 6 straight or branched chain alkenyl), or

A and A′ are taken together as ═O;

L 1 is a monodentate ligand capable of acting as a ligand for said metal M, a bidentate ligand capable of acting as a ligand for said metal M, or a tridentate ligand capable of acting as a ligand for said metal M; and,

L 2 is cyclopentadienylamido.

21. A method for inhibiting PI3K or phospho-AKT kinase activity in a subject comprising administering to said subject a therapeutically effective amount of a compound of formula I

or a pharmaceutically acceptable salt thereof, wherein:

X 1 , X 2 , X 3 , X 4 , X 5 , and X 6 are each independently N, C, S, O, B, or Si;

R 1 and R 2 are taken together to form a mono-, bi- or tricyclic, carbo- or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

R 3 and R 4 are taken together to form a mono-, bi- or tricyclic, carbo-, or heterocyclic ring, wherein the ring is either unsubstituted or substituted in one or more position(s) with halo, hydroxyl, carbonyl, nitro, amino, trihaloalkyl, substituted or unsubstituted C 1 -C 4 alkoxy, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-OH, substituted or unsubstituted straight or branched C 1 -C 6 alkyl-NH 2 , C 1 -C 4 alkenyloxy, aryl, aralkyl, phenoxy, benzyloxy, or any other hydrogen bond donor or acceptor, wherein the individual ring size for a monocyclic ring is 5-7 members and for a bicyclic or tricyclic ring is 3-8 members, and wherein a heterocyclic ring contains 1-5 heteroatom(s) selected from the group consisting of O, N, and S;

M is Ru, Pt, Tc, Re, Os, Rh, Ir, Pd, Au, Cu, Fe, Co, or Cr;

Q is straight or branched chain C 1 -C 6 alkyl or alkenyl, optionally substituted with halo, hydroxyl, nitro, trifluoromethyl, C 1 -C 4 straight or branched chain alkyl or alkenyl, C 1 -C 4 alkoxy, C 1 -C 4 alkenyloxy, phenoxy, benzyloxy, or amino;

A and A′ are each independently hydrogen, hydroxy, hydroxymethyl, C 1 -C 6 straight or branched chain alkyl, C 2 -C 6 straight or branched chain alkenyl, O—(C 1 -C 6 straight or branched chain alkyl), or O—(C 2 -C 6 straight or branched chain alkenyl), or

A and A′ are taken together as ═O;

each L 1 is a monodentate ligand capable of acting as a ligand for said metal M, a bidentate ligand capable of acting as a ligand for said metal M, or a tridentate ligand capable of acting as a ligand for said metal M; and

L 2 is cyclopentadienylamido.

Assignments (4)
CONFIRMATORY LICENSE Recorded Aug 30, 2010
From: THE WISTAR INSTITUTE OF ANATOMY AND BIOLOGY
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 024903/0650 →
CONFIRMATORY LICENSE Recorded Apr 30, 2009
From: WISTAR INSTITUTE OF ANATOMY AND BIOLOGY
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 022617/0393 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 11, 2008
From: MEGGERS, ERIC; WILLIAMS, DOUGLAS S.
To: THE TRUSTEES OF THE UNIVERSITY OF PENNSYLVANIA
Reel/Frame 021512/0283 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 11, 2008
From: XIE, PENG; MARMORSTEIN, RONEN
To: THE WISTAR INSTITUTE OF ANATOMY AND BIOLOGY
Reel/Frame 021512/0291 →
Continuity (1)
Related Publication 20090275547A1 · Nov 5, 2009