IP Library Granted Patent US 8,242,175
Granted Patent B2
US 8,242,175 · App. 12/962,209 · Granted Aug 14, 2012

Class of histone deacetylase inhibitors

Assignee: DAC S.R.L.
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Quick Facts
Patent No.
US 8,242,175
App. No.
12/962,209
Granted
Aug 14, 2012
Kind
B2
Abstract

New histone deacetylase inhibitors according to the general formula (I) wherein: Q is a bond, CH 2 , CH—NR 3 R 4 , NR 5 or oxygen, X is CH or nitrogen, Y is a bond, CH 2 , oxygen or NR 6 , Z is CH or nitrogen, R 1 , R 2 are, independently, hydrogen, halogen, C 1 -C 6 alkyl or C 1 -C 6 haloalkyl, R 11 , R 12 are, independently, hydrogen or C 1 -C 6 alkyl, and R 3 , R 4 , R 5 and R 6 are as further defined in the specification.

Claims (161)

1. A compound of formula (I)

wherein:

Q is a bond, CH 2 , CH—NR 3 R 4 , NR 5 or oxygen;

X is CH or nitrogen;

Y is a bond, CH 2 , oxygen or NR 6 ;

Z is CH or nitrogen;

R 1 , R 2 are, independently, hydrogen, halogen, C 1 -C 6 alkyl, or C 1 -C 6 haloalkyl:

R 3 , R 4 are, independently, hydrogen, C 1 -C 6 alkyl, phenyl or benzyl;

R 5 is hydrogen, C 1 -C 6 alkyl, (CO)R 7 , SO 2 —C 1 -C 6 alkyl, phenyl or benzyl;

R 6 is hydrogen, C 1 -C 6 alkyl or benzyl;

R 7 is hydrogen, C 1 -C 6 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 6 alkyl;

R 9 is hydrogen, C 1 -C 6 alkyl, phenyl or benzyl;

R 10 is hydrogen, C 1 -C 6 alkyl or benzyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 6 alkyl;

and the pharmaceutically acceptable salts thereof;

with the proviso that when X is nitrogen, Y cannot be oxygen or NR 6 ;

and with the exclusion of the following compounds:

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-N-Hydroxy-3-{4-[(E)-3-(4-morpholin-4-yl-phenyl)-3-oxo-propenyl]-phenyl}-acrylamide;

(E)-3-{3-Fluoro-4-[(E)-3-(4-morpholin-4-yl-phenyl)-3-oxo-propenyl]-phenyl}-N-hydroxy-acrylamide.

2. Compound according to claim 1 , wherein one or more of the aforesaid alkyls is a C 1 -C 4 alkyl group.

3. Compound according to claim 1 , wherein:

R 1 , R 2 are, independently, hydrogen, fluorine, chlorine, C 1 -C 2 alkyl, or CF 3 ;

R 3 , R 4 are, independently, hydrogen, C 1 -C 2 alkyl, phenyl or benzyl;

R 5 is hydrogen, C 1 -C 2 alkyl, (CO)R 7 , SO 2 —C 1 -C 2 alkyl, phenyl or benzyl;

R 6 is hydrogen, C 1 -C 2 alkyl or benzyl;

R 7 is hydrogen, C 1 -C 2 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 2 alkyl;

R 9 is hydrogen, C 1 -C 2 alkyl, phenyl or benzyl;

R 10 is hydrogen, C 1 -C 2 alkyl or benzyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 2 alkyl.

4. Compound according to claim 1 , having formula (Ia),

wherein:

Q is CH 2 , CH—NR 3 R 4 , or NR 5 ;

X is CH or nitrogen;

R 1 , R 2 are, independently, hydrogen, halogen, C 1 -C 4 alkyl, or C 1 -C 4 haloalkyl;

R 3 , R 4 are, independently, hydrogen or C 1 -C 4 alkyl;

R 5 is hydrogen, C 1 -C 4 alkyl, (CO)R 7 , phenyl or benzyl;

R 7 is hydrogen, C 1 -C 6 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 4 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 4 alkyl.

5. Compound according to claim 4 , wherein:

Q is CH 2 , CH—NR 3 R 4 , or NR 5 ;

X is CH or nitrogen;

R 1 , R 2 are, independently, hydrogen, fluoro, chloro, or CF 3 ;

R 3 , R 4 are, independently, hydrogen or C 1 -C 2 alkyl;

R 5 is hydrogen, C 1 -C 4 alkyl, (CO)R 7 , phenyl or benzyl;

R 7 is hydrogen, C 1 -C 4 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 2 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 2 alkyl.

6. Compound according to claim 4 , wherein:

Q is NR 5 ;

X is nitrogen;

R 1 , R 2 are, independently, hydrogen, fluoro, chloro or CF 3 ;

R 5 is hydrogen, C 1 -C 4 alkyl, (CO)R 7 , phenyl or benzyl;

R 7 is hydrogen, C 1 -C 4 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 2 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 2 alkyl.

7. Compound according to claim 4 , selected from:

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(4-methyl-piperazin-1-yl-methyl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Dimethylamino-piperidin-1-yl-methyl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(1-methyl-piperidin-4-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-N-Hydroxy-3-{4-[(E)-3-oxo-3-(4-piperazin-1-ylmethyl-phenyl)-propenyl]-phenyl}-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Benzyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[4-((3R,5S)-3,5-Dimethyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Acetyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[4-((3R,5S)-4-Acetyl-3,5-dimethyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Ethyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[3-(4-methyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[2-(4-methyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide.

8. Compound according to claim 1 , having formula (Ib)

wherein:

Q is CH 2 , CH—NR 3 R 4 , or NR 5 ;

X is CH or nitrogen;

R 1 , R 2 are, independently, hydrogen, halogen, C 1 -C 4 alkyl or C 1 -C 4 haloalkyl;

R 3 , R 4 are, independently, hydrogen or C 1 -C 4 alkyl;

R 5 is hydrogen, C 1 -C 4 alkyl, (CO)R 7 , SO 2 —C 1 -C 4 alkyl, phenyl or benzyl;

R 7 is hydrogen, C 1 -C 6 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 4 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 4 alkyl;

with the exclusion of the following compound:

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide.

9. Compound according to claim 8 , wherein, within said formula (Ib), the group:

is in ortho or meta position with respect to the 3-oxo-propenyl moiety, and:

Q is CH 2 or NR 5 ;

X is CH or nitrogen;

R 1 , R 2 are, independently, hydrogen, fluoro, chloro or CF 3 ;

R 5 is hydrogen, C 1 -C 4 alkyl, (CO)R 7 , phenyl or benzyl;

R 7 is hydrogen, C 1 -C 4 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 2 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 2 alkyl.

10. Compound according to claim 8 , selected from:

(E)-3-(4-{(E)-3-[5-Chloro-2-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[2-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[3-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(4-methylamino-piperidin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Dimethylamino-piperidin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(1-methyl-piperidin-4-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(4-isobutyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Ethyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Benzyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-{4-[(E)-3-(4-piperazin-1-yl-phenyl)-3-oxo-propenyl]-phenyl}-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Benzoyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[4-(4-Acetyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(4-{(E)-3-[4-(4-methanesulfonyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-acrylamide;

4-(4-{(E)-3-[4-((E)-2-Hydroxycarbamoyl-vinyl)-phenyl]-acryloyl}-phenyl)-piperazine-1-carboxylic acid dimethylamide;

4-(4-{(E)-3-[4-((E)-2-Hydroxycarbamoyl-vinyl)-phenyl]-acryloyl}-phenyl)-piperazine-1-carboxylic acid amide;

4-(4-{(E)-3-[4-((E)-2-Hydroxycarbamoyl-vinyl)-phenyl]-acryloyl}-phenyl)-piperazine carboxylic acid ethyl ester;

(E)-N-Hydroxy-3-(4-{(E)-3-oxo-3-[4-((3R,5S)-3,4,5-trimethyl-piperazin-1-yl)-phenyl]-propenyl}-phenyl)-acrylamide;

(E)-3-(4-{(E)-3-[3-Chloro-5-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide;

(E)-3-(4-{(E)-3-[2-Chloro-5-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-phenyl)-N-hydroxy-acrylamide.

11. Compound according to claim 1 , having formula (Ic)

wherein:

Q is CH 2 , CH—NR 3 R 4 , NR 5 or oxygen;

X is CH or nitrogen;

Y is a bond, CH 2 , oxygen or NR 6 ;

R 1 , R 2 are, independently, hydrogen, halogen, C 1 -C 4 alkyl, or C 1 -C 4 haloalkyl;

R 3 , R 4 are, independently, hydrogen or C 1 -C 4 alkyl;

R 5 is hydrogen, C 1 -C 4 alkyl, (CO)R 7 , phenyl or benzyl;

R 6 is hydrogen or C 1 -C 4 alkyl;

R 7 is hydrogen, C 1 -C 6 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 4 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 4 alkyl;

provided that when X is nitrogen, Y cannot be oxygen or NR 6 .

12. Compound according to claim 11 , wherein:

Q is CH 2 , NR 5 or oxygen;

X is CH or nitrogen;

Y is a bond or CH 2 ;

R 1 , R 2 are, independently, hydrogen, fluoro, chloro or CF 3 ;

R 5 is hydrogen, C 1 -C 2 alkyl, (CO)R 7 , phenyl or benzyl;

R 7 is hydrogen, C 1 -C 4 alkyl, phenyl, benzyl, OR 8 or NR 9 R 10 ;

R 8 is C 1 -C 4 alkyl;

R 9 , R 10 are, independently, hydrogen or C 1 -C 2 alkyl;

R 11 , R 12 are, independently, hydrogen or C 1 -C 2 alkyl.

13. Compound according to claim 11 , selected from:

(E)-N-Hydroxy-3-(5-{(E)-3-[4-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-[2-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-[3-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide;

(E)-3-(5-{(E)-3-[4-(4-Benzyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-oxo-3-[4-((3R,5S)-3,4,5-trimethyl-piperazin-1-yl)-phenyl]-propenyl}-pyridin-2-yl)-acrylamide;

(E)-N-Hydroxy-3-{5-[(E)-3-(4-morpholin-4-ylmethyl-phenyl)-3-oxo-propenyl]-pyridin-2-yl}-acrylamide;

(E)-3-(5-{(E)-3-[4-(4-Ethyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-N-hydroxy-acrylamide;

(E)-3-(5-{(E)-3-[4-(4-Acetyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-oxo-3-[3-((3R,5S)-3,4,5-trimethyl-piperazin-1-yl)-phenyl]-propenyl}-pyridin-2-yl)-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-[4-(1-methyl-piperidin-4-ylmethyl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide;

(E)-N-Hydroxy-3-{5-[(E)-3-oxo-3-(4-piperazin-1-yl-phenyl)-propenyl]-pyridin-2-yl}-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-[2-(4-methyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide;

(E)-N-Hydroxy-3-{5-[(E)-3-oxo-3-(4-piperazin-1-ylmethyl-phenyl)-propenyl]-pyridin-2-yl}-acrylamide;

(E)-3-(5-{(E)-3-[4-(4-Acetyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-[4-(4-methyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide;

(E)-3-(5-{(E)-3-[3-Chloro-5-(4-methyl-piperazin-1-yl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-N-hydroxy-acrylamide;

(E)-N-Hydroxy-3-(5-{(E)-3-[3-(4-methyl-piperazin-1-ylmethyl)-phenyl]-3-oxo-propenyl}-pyridin-2-yl)-acrylamide.

14. A pharmaceutical composition comprising one or more compounds of formula (I) as defined in claim 1 , in association with pharmaceutically acceptable excipients.

15. A composition according to claim 14 in the form of a tablet, capsule, pill, oral preparation, powder, granular preparation, injectable or infusible solution or suspension, suppository, aqueous or oily suspension, solution, emulsion, syrup, elixir, cream, ointment, paste, gel, solution, oil or lotion, membrane or medicated patch.

Assignments (3)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 10, 2017
From: DAC S.R.L. IN LIQUIDAZIONE
To: GENEXTRA S.P.A.
Reel/Frame 041539/0105 →
CHANGE OF NAME Recorded Jan 17, 2017
From: DAC S.R.L.
To: DAC S.R.L. IN LIQUIDAZIONE
Reel/Frame 041521/0568 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 16, 2011
From: MAI, ANTONELLO; MINUCCI, SAVERIO; THALER, FLORIAN; PAIN, GILLES; COLOMBO, ANDREA; GAGLIARDI, STEFANIA; PELICCI, PIER GIUSEPPE; BALLARINI, MARCO; GARGIULO, GAETANO; MASSA, SILVIO
To: DAC S.R.L.
Reel/Frame 025966/0640 →
Priority Claims (2)
IT MI2004A1869 · Oct 1, 2004 · national
IT MI2006A0621 · Mar 31, 2006 · national
Continuity (4)
Continuation In Part 12791465 · Jun 1, 2010
Division 11664187
Continuation 12295498
Related Publication 20110077247A1 · Mar 31, 2011