IP Library Granted Patent US 8,574,923
Granted Patent B2
US 8,574,923 · App. 13/682,551 · Granted Nov 5, 2013

Sample preparation device

Inventors: Christopher G. Cooney (Severn, MD); Phillip Belgrader (Livermore, CA)
Assignee: Akonni Biosystems, Inc.
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Quick Facts
Patent No.
US 8,574,923
App. No.
13/682,551
Filed
Nov 20, 2012
Granted
Nov 5, 2013
Kind
B2
Art Unit
1777
USPC
436/178
Abstract

A sample preparation device is disclosed. The sample preparation device includes a housing defining a passage way between a first opening and a second opening; and a sample filter occupying a section of said passage way. The sample filter contains a monolith adsorbent that specifically binds to nucleic acids. Also disclosed are sample filters containing glass frit is coated with an capture agent that binds specifically to an analyte of interest, sample filters containing a hydrophilic matrix with impregnated chemicals that lyses cell membranes, a cartridge base and an integrated sample preparation cartridge.

Claims (32)

1. A method for purifying an analyte from a liquid sample, comprising:

placing said liquid sample in a container;

withdrawing at least a portion of said liquid sample into a sample preparation device comprising:

a housing defining a passage way between a first opening and a second opening; and

a filter occupying a section of said passage way, said filter comprising a material that specifically binds to said analyte,

wherein said portion of liquid sample is drawn into said housing via the first opening and passing through said filter, wherein said filter comprises a glass frit, and wherein said analyte is a nucleic acid that binds to said glass frit while passing through said filter;

expelling said portion of liquid sample from said sample preparation device via the first opening, wherein said portion of liquid sample passes through said filter a second time while exiting said sample preparation device; and

eluting said analyte from said filter by withdrawing an eluting buffer into said sample preparation device via the first opening and expelling said eluting buffer from said sample preparation device via the first opening, wherein said eluting buffer passes through said filter while entering and exiting said sample preparation device.

2. The method of claim 1 , wherein said sample withdrawing and sample expelling steps are repeated until all said liquid sample passes through said filter at least once.

3. The method of claim 1 , wherein said sample preparation device has the configuration of a pipette tip.

4. The method of claim 1 , wherein said withdrawing, expelling and eluting steps are controlled by an electronic pipettor.

5. The method of claim 1 , wherein said withdrawing, expelling and eluting steps are controlled by an robotic pipetting station.

6. The method of claim 1 , wherein said glass frit has a pore size between about 2 microns and about 220 microns.

7. The method of claim 1 , wherein said glass frit has a thickness between about 2 mm and about 5 mm.

8. The method of claim 1 , wherein said sample preparation device comprises two or more filters of different porosity, wherein said two or more filters bind specifically to nucleic acids.

9. The method of claim 1 , further comprising:

washing said filter by withdrawing a washing buffer into said sample preparation device via the first opening and expelling said washing buffer from said sample preparation device via the first opening, wherein said washing buffer passes through said filter while entering and exiting said sample preparation device.

10. The method of claim 9 wherein said washing step is repeated two or more times.

11. A method for purifying an analyte from a sample, comprising:

passing said sample through a sample preparation device comprising:

a housing defining a passage way between a first opening and a second opening; and

a sample filter occupying a section of said passage way,

wherein said sample filter comprises a glass frit that specifically binds to said analyte and said sample passes through said sample filter while passing through said sample preparation device; and

eluting analyte bound to said sample filter with an eluting solution,

wherein said sample and said eluting solution enter and exit said housing through the same opening.

12. The method of claim 11 , wherein said sample preparation device is attached to a cartridge base comprising a first port configured to receive said sample preparation device and a second port configured to receive a liquid delivery device.

13. The method of claim 11 , further comprising:

washing said sample filter with a washing solution, wherein said washing solution enter and exit said housing through the same opening.

14. The method of claim 11 , wherein said sample preparation device comprises two or more sample filters of different porosity, wherein said two or more filters bind specifically to nucleic acids.

15. The method of claim 11 , wherein said analyte is a nucleic acid.

16. The method of claim 15 , wherein said porous glass fit has a pore size between about 2 microns and about 220 microns.

17. The method of claim 15 , wherein said porous glass frit has a thickness between about 2 mm and about 5 mm.

Assignments (6)
AMENDED AND RESTATED SECURITY AGREEMENT Recorded May 27, 2025
From: AKONNI BIOSYSTEMS, INC.
To: FIRESTONE, LAWRENCE
Reel/Frame 071394/0594 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 9, 2024
From: COONEY, CHRISTOPHER; HOLMBERG, REBECCA; BELGRADER, PHILLIP; QU, PETER
To: AKONNI BIOSYSTEMS, INC.
Reel/Frame 068233/0200 →
SECURITY INTEREST Recorded Jun 6, 2019
From: AKONNI BIOSYSTEMS, INC.
To: ROSENBLUM, RICHARD
Reel/Frame 049390/0037 →
RELEASE OF SECURITY INTEREST Recorded Feb 14, 2018
From: ROSENBLUM, RICHARD
To: AKONNI BIOSYSTEMS, INC.
Reel/Frame 044929/0984 →
SECURITY INTEREST Recorded Mar 15, 2017
From: AKONNI BIOSYSTEMS, INC.
To: ROSENBLUM, RICHARD
Reel/Frame 041582/0144 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 5, 2013
From: COONEY, CHRISTOPHER G.; BELGRADER, PHILLIP
To: AKONNI BIOSYSTEMS, INC.
Reel/Frame 031146/0289 →
Continuity (3)
Division 12213942 · Jun 26, 2008
Continuation In Part 11933113 · Oct 31, 2007
Related Publication 20130078619A1 · Mar 28, 2013