IP Library Granted Patent US 9,096,594
Granted Patent B2
US 9,096,594 · App. 14/052,661 · Granted Aug 4, 2015

Kinase inhibitors and methods of use thereof

Inventors: Florence Fevrier Wagner (Ashland, MA); Jennifer Q. Pan (Acton, MA); Sivaraman Dandapani (Malden, MA); Andrew Germain (Somerville, MA); Edward Holson (Newton, MA); Benito Munoz (Newtonville, MA); Partha P. Nag (Somerville, MA); Michel Weiwer (Cambridge, MA); Michael C. Lewis (Boston, MA); Stephen J. Haggarty (Gloucester, MA); Joshua A. Bishop (Southborough, MA); Kimberly Stegmaier (Jamaica Plain, MA); Versha Banerji (Winnipeg, CA)
Assignees: The Broad Institute, Inc.; The General Hospital Corporation; Dana-Farber Cancer Institute, Inc.
C07D471/04C07D471/10
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Quick Facts
Patent No.
US 9,096,594
App. No.
14/052,661
Granted
Aug 4, 2015
Kind
B2
Abstract

The present invention provides compounds of formula I, pharmaceutically acceptable salts thereof, and pharmaceutical compositions thereof. Compounds of the present invention are useful for inhibiting kinase (e.g., GSK3 (e.g., GSK3α or GSK3β) or CK1) activity. The present invention further provides methods of using the compounds described herein for treating kinase-mediated disorders, such as neurological diseases, psychiatric disorders, metabolic disorders, and cancer.

Claims (41)

1. A compound of formula I:

or a pharmaceutically acceptable salt thereof,

wherein

R 1 and R 2 are independently selected from the group consisting of optionally substituted aliphatic, optionally substituted aryl, and optionally substituted heteroaryl; or R 1 and R 2 are taken together with their intervening atoms to form an optionally substituted 3- to 7-membered saturated carbocyclic or heterocyclic ring, wherein the ring formed by R 1 and R 2 may be optionally fused to an aryl or heteroaryl ring;

R 3 is selected from the group consisting of hydrogen, halo, —CN, —NO 2 , optionally substituted aliphatic, optionally substituted phenyl, optionally substituted heterocyclyl, optionally substituted heteroaryl, —OR A , —N(R B ) 2 , —SR A , —C(═O)R A , —C(═O)OR A , —C(═O)SR A , —C(═O)N(R B ) 2 , —OC(═O)R A , —NR B C(═O)R A , —NR B C(═O)N(R B ) 2 , —OC(═O)N(R B ) 2 , —NR B C(═O)OR A , —SC(═O)R A , —C(═NR B )R A , —C(═NR B )N(R B ) 2 , —NR B C(═NR B )R B , —C(═S)R A , —C(═S)N(R B ) 2 , —NR B C(═S)R A , —S(═O)R A , —SO 2 R A , —NR B SO 2 R A , and —SO 2 N(R B ) 2 ;

each R A is independently selected from the group consisting of hydrogen, optionally substituted aliphatic, optionally substituted carbocyclyl, optionally substituted heterocyclyl, optionally substituted aryl, and optionally substituted heteroaryl;

each R B is independently selected from the group consisting of hydrogen, optionally substituted aliphatic, optionally substituted carbocyclyl, optionally substituted heterocyclyl, optionally substituted aryl, and optionally substituted heteroaryl, or two R B groups are taken together with their intervening atoms to form an optionally substituted heterocyclic ring;

R 4a and R 4b are hydrogen;

R 5a and R 5b are independently selected from the group consisting of hydrogen, halo, —CN, —OR A , —N(R B ) 2 , and optionally substituted aliphatic, or R 5a and R 5b are taken together with their intervening atoms to form an optionally substituted 3- to 7-membered saturated carbocyclic or heterocyclic ring; and

R 6a and R 6b are hydrogen.

2. The compound of claim 1 , wherein the compound is of formula II:

or a pharmaceutically acceptable salt thereof,

wherein

each R 7 is independently selected from the group consisting of hydrogen, halo, —CN, —NO 2 , optionally substituted aliphatic, optionally substituted phenyl, optionally substituted heterocyclyl, optionally substituted heteroaryl, —OR A , —N(R B ) 2 , —SR A , —C(═O)R A , —C(═O)OR A , —C(═O)SR A , —C(═O)N(R B ) 2 , —OC(═O)R A , —NR B C(═O)R A , —NR B C(═O)N(R B ) 2 , —OC(═O)N(R B ) 2 , —NR B C(═O)OR A , —SC(═O)R A , —C(═NR B )R A , —C(═NR B )N(R B ) 2 , —NR B C(═NR B )R B , —C(═S)R A , —C(═S)N(R B ) 2 , —NR B C(═S)R A , —S(═O)R A , —SO 2 R A , —NR B SO 2 R A , and —SO 2 N(R B ) 2 ; or two adjacent R 7 groups are taken together with their intervening atoms to form an optionally substituted carbocyclic or heterocyclic fused ring; or R 2 and R 7 are taken together with their intervening atoms to form an optionally substituted carbocyclic or heterocyclic fused ring; and

n is 0, 1, 2, 3, 4, or 5.

3. The compound of claim 1 , wherein the compound is of formula III:

or a pharmaceutically acceptable salt thereof,

wherein

Ring A is a 5- to 6-membered heteroaryl, 4- to 6-membered carbocyclyl, or 4- to 6-membered heterocyclyl;

each R 7 is independently selected from the group consisting of hydrogen, halo, —CN, —NO 2 , optionally substituted aliphatic, optionally substituted phenyl, optionally substituted heterocyclyl, optionally substituted heteroaryl, —OR A , —N(R B ) 2 , —SR A , —C(═O)R A , —C(═O)OR A , —C(═O)SR A , —C(═O)N(R B ) 2 , —OC(═O)R A , —NR B C(═O)R A , —NR B C(═O)N(R B ) 2 , —OC(═O)N(R B ) 2 , —NR B C(═O)OR A , —SC(═O)R A , —C(═NR B )R A , —C(═NR B )N(R B ) 2 , —NR B C(═NR B )R B , —C(═S)R A , —C(═S)N(R B ) 2 , —NR B C(═S)R A , —S(═O)R A , —SO 2 R A , —NR B SO 2 R A , and —SO 2 N(R B ) 2 ; or two adjacent R 7 groups are taken together with their intervening atoms to form an optionally substituted carbocyclic or heterocyclic fused ring; or R 2 and R 7 are taken together with their intervening atoms to form an optionally substituted carbocyclic or heterocyclic fused ring; and

n is 0, 1, 2, 3, or 4, as valency allows.

4. The compound of claim 1 , wherein R 3 is hydrogen.

5. The compound of claim 1 , wherein R 3 is optionally substituted aliphatic.

6. The compound of claim 1 , wherein R 3 is trifluoromethyl.

7. The compound of claim 1 , wherein R 2 is optionally substituted aliphatic.

8. The compound of claim 1 , wherein R 5a and R 5b are methyl.

9. The compound of claim 2 , wherein n is 0, 1, or 2.

10. The compound of claim 1 , wherein the compound is one of the following:

or a pharmaceutically acceptable salt thereof.

11. A composition comprising a compound of claim 1 , or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient.

12. A method of inhibiting GSK3 comprising contacting GSK3 with an effective amount of a compound of claim 1 .

13. The compound of claim 1 , wherein R 1 is optionally substituted pyridyl.

14. The compound of claim 1 , wherein R 1 is unsubstituted 3-pyridyl.

15. The compound of claim 1 , wherein R 2 is methyl.

16. The compound of claim 1 , wherein R 3 is methyl.

17. The compound of claim 1 , wherein R 3 is optionally substituted alkynyl or —CN.

18. The compound of claim 1 , wherein R 3 is optionally substituted alkyl.

19. The compound of claim 1 , wherein R 3 is substituted or unsubstituted cycloalkyl.

20. The compound of claim 1 , wherein R 3 is cyclopropyl.

21. The compound of claim 1 , wherein R 2 is optionally substituted alkyl.

22. The compound of claim 1 , wherein R 2 is ethyl.

Assignments (6)
CONFIRMATORY LICENSE Recorded Aug 3, 2017
From: BROAD INSTITUTE, INC.
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 043420/0267 →
CONFIRMATORY LICENSE Recorded May 14, 2015
From: BROAD INSTITUTE, INC.
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 035664/0288 →
CORRECTIVE ASSIGNMENT TO CORRECT THE NAME OF INVENTOR MICHEL WEIWER PREVIOUSLY RECORDED ON REEL 033045 FRAME 0011. ASSIGNOR(S) HEREBY CONFIRMS THE INVENTOR'S CORRECT NAME IS MICHEL WEIWER. Recorded Aug 15, 2014
From: WAGNER, FLORENCE FEVRIER; PAN, JENNIFER Q.; DANDAPANI, SIVARAMAN; GERMAIN, ANDREW; HOLSON, EDWARD; MUNOZ, BENITO; NAG, PARTHA P.; WEIWER, MICHEL; LEWIS, MICHAEL C.
To: THE BROAD INSTITUTE, INC.
Reel/Frame 033547/0387 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 6, 2014
From: HAGGARTY, STEPHEN J; BISHOP, JOSHUA A
To: THE GENERAL HOSPITAL CORPORATION D/B/A MASSACHUSETTS GENERAL HOSPITAL
Reel/Frame 033044/0934 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 6, 2014
From: WAGNER, FLORENCE FEVRIER; PAN, JENNIFER Q; DANDAPANI, SIVARAMAN; GERMAIN, ANDREW; HOLSON, EDWARD; MUNOZ, BENITO; NAG, PARTHA P; WELWER, MICHEL; LEWIS, MICHAEL C
To: THE BROAD INSTITUTE, INC.
Reel/Frame 033045/0011 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 6, 2014
From: STEGMAIER, KIMBERLY; BANERJI, VERSHA
To: DANA-FARBER CANCER INSTITUTE, INC.
Reel/Frame 033045/0074 →
Continuity (3)
Provisional Application 61713314 · Oct 12, 2012
Provisional Application 61779394 · Mar 13, 2013
Related Publication 20140107141A1 · Apr 17, 2014