Recombinant HCMV and RHCMV vectors and uses thereof
The present invention relates to recombinant rhesus cytomegalovirus (RhCMV) and human cytomegalovirus (HCMV) vectors encoding heterologous antigens, such as pathogen-specific antigens or tumor antigens, which may be used, for example, for the treatment or prevention of infectious disease or cancer. The recombinant RhCMV or HCMV vectors elicit and maintain high level cellular immune responses specific for the heterologous antigen while including deletions in one or more genes essential or augmenting for CMV replication, dissemination or spread.
1. A recombinant viral vector comprising a nucleic acid sequence encoding a human cytomegalovirus (HCMV) backbone vector and at least one human immunodeficiency virus (HIV)-derived antigen,
wherein the recombinant viral vector: (a) comprises a deletion in gene UL82 that eliminates expression of a functional pp71 protein, (b) is deficient in host to host spread, (c) infects a HCMV seropositive host upon administration of said recombinant viral vector, and (d) induces and maintains a long-term effector memory T cell response to the at least one HIV-derived antigen in said seropositive host.
2. The recombinant viral vector of claim 1 , further comprising a deletion in a HCMV gene region non-essential for growth in vivo.
3. The recombinant viral vector of claim 2 , wherein the non-essential HCMV gene region is selected from the group consisting of: the RL11 family, the pp65 family, the US12 family, and the US28 family.
4. The recombinant viral vector of claim 2 , wherein the non-essential HCMV gene region is selected from the group consisting of: RL11, UL6, UL7, UL9, UL11, UL78, UL83, US12, US13, US14, US17, US18, US19, US20, US21, and UL28.
5. The recombinant viral vector of claim 1 , further comprising at least one deletion in a HCMV gene required for optimal growth in certain cell types.
6. The recombinant viral vector of claim 5 , wherein the at least one deletion in a HCMV gene required for optimal growth in certain cell types comprises a deletion in UL64 or US29, or a combination thereof.
7. The recombinant viral vector of claim 5 , wherein the recombinant viral vector has a deficient tropism for epithelial cells, the central nervous system (CNS), macrophages, or a combination thereof.
8. The recombinant viral vector of claim 1 , further comprising a deletion in at least one immune modulatory gene selected from the group consisting of: US2, US3, US4, US5, US6, US7, US8, US9, US10, US11, UL118, UL119, UL36, UL37, UL111a, UL146, and UL147.
9. The recombinant viral vector of claim 1 , wherein the HCMV backbone vector comprises a nucleic acid sequence that is at least 90%, at least 95%, at least 99%, or 100% identical to the nucleic acid sequence of SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 7, SEQ ID NO: 8, or SEQ ID NO: 9.
10. The recombinant viral vector of claim 1 , wherein the at least one HIV-derived antigen is selected from the group consisting of: Gag, Pol, Env, Rev, Tat, and Nef, or an epitope or antigenic fragment thereof.
11. A recombinant viral vector comprising a nucleic acid sequence encoding a rhesus cytomegalovirus (RhCMV) backbone vector and at least one simian immunodeficiency virus (SIV)-derived antigen,
wherein the recombinant viral vector: (a) comprises a deletion in gene Rh110 that eliminates expression of a functional pp71 protein, (b) is deficient in host to host spread, (c) infects a RhCMV seropositive host upon administration of said recombinant viral vector, and (d) induces and maintains a long-term effector memory T cell response to the at least one SIV-derived antigen in said seropositive host.
12. The recombinant viral vector of claim 11 , further comprising a deletion in a RhCMV gene region non-essential for growth in viva.
13. The recombinant viral vector of claim 12 , wherein the non-essential RhCMV gene region is selected from the group consisting of: the RL11 family, the pp65 family, the US12 family, and the US28 family.
14. The recombinant viral vector of claim 11 , further comprising a deletion in at least one immune modulatory gene selected from the group consisting of: Rh158, Rh159, Rh160, Rh161, Rh162, Rh163, Rh164, Rh165, Rh166, Rh182, Rh183, Rh184, Rh185, Rh186, Rh187, Rh188, and Rh189.
15. The recombinant viral vector of claim 11 , wherein the RhCMV backbone vector comprises a nucleic acid sequence that is at least 90%, at least 95%, at least 99%, or 100% identical to the nucleic acid sequence of SEQ ID NO: 1.
16. The recombinant viral vector of claim 11 , wherein the at least one SIV-derived antigen is selected from the group consisting of: Gag, Pol, Env, Rev, Tat, and Nef, or an epitope or antigenic fragment thereof.
17. A recombinant viral vector comprising a nucleic acid sequence encoding a HCMV backbone vector and at least one HIV Gag epitope, wherein the recombinant viral vector: (a) comprises a deletion in gene UL82 that eliminates expression of a functional pp71 protein, (b) is deficient in host to host spread, (c) infects a HCMV seropositive host upon administration of said recombinant viral vector, and (d) induces and maintains a long-term effector memory T cell response to HIV Gag.
18. The recombinant viral vector of claim 12 , wherein the non-essential RhCMV gene region is selected from the group consisting of: Rh13-Rh29, Rh111-Rh112, Rh191-Rh202, Rh214-Rh220, Rh13.1, Rh19, Rh20, Rh23, Rh24, Rh112, Rh190, Rh192, Rh196, Rh198, Rh199, Rh200, Rh201, Rh202, and Rh220.
19. The recombinant viral vector of claim 11 , further comprising at least one deletion in an RhCMV gene required for optimal growth in certain cell types.
20. The recombinant viral vector of claim 19 , wherein the recombinant vector has a deficient tropism for epithelial cells, the central nervous system (CNS), macrophages, or a combination thereof.
21. The recombinant viral vector of claim 17 , further comprising at least one HIV-derived antigen selected from the group consisting of: Pol, Env, Rev, Tat, and Nef, or an epitope or antigenic fragment thereof.
22. The recombinant viral vector of claim 17 , further comprising a deletion in a HCMV gene region non-essential for growth in vivo.
23. The recombinant viral vector of claim 17 , further comprising at least one deletion in a HCMV gene required for optimal growth in certain cell types.
24. The recombinant viral vector of claim 23 , wherein the recombinant vector has a deficient tropism for epithelial cells, the central nervous system (CNS), macrophages, or a combination thereof.