IP Library Granted Patent US 9,328,129
Granted Patent B2
US 9,328,129 · App. 13/884,394 · Granted May 3, 2016

Peptidomimetic inhibitors of PSMA

Inventors: Clifford E. Berkman (Woodenville, WA); Henry F. Vanbrocklin (San Francisco, CA)
Assignees: Washington State University; The Regents of the University of California
C07F9/24A61K31/664A61K51/0489C07F9/2408C07F9/2458C07F13/005G01N33/57492
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Quick Facts
Patent No.
US 9,328,129
App. No.
13/884,394
Granted
May 3, 2016
Kind
B2
Abstract

Compounds of the formulae, (I), wherein each variable is as defined herein are provided which are useful in (i) diagnostic methods for detecting and/or identifying cells presenting PSMA; (2) compositions comprising a compound of the invention together with a pharmaceutically acceptable carrier, excipient, and/or diluent; (3) methods for inhibiting or treating prostrate cancer; and (4) methods for blocking or destabilizing neovasculature of a tumor.

Claims (54)

1. A compound of the formula

or a pharmaceutically acceptable salt thereof, wherein

X and Y are independently —O— or —N(R)—, wherein each R is independently hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, —C 1 -C 7 alkylheteroaryl, or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

m is 1, 2, 3, 4, 5, or 6;

n is 1, 2, 3, 4, 5, or 6;

R 1 and R 2 are each independently —C(O)OR 3 , —C(O)N(R 3 ) 2 , —P(O)(OR 3 ) 2 , —OP(O)(OR 3 ) 2 , —S(O) 2 R 3 , —S(O) 2 OR 3 , —S(O) 2 N(R 3 ) 2 , or tetrazolyl; each

R 3 is independently hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, —C 1 -C 7 alkylheteroaryl, or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

R 4 ═CO 2 H

R 5 is hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, —C 1 -C 7 alkylheteroaryl, or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

each R 6 is independently hydrogen, or C 1 -C 4 alkyl;

M is —N(R 31 )—, or —CH 2 —, wherein R 31 is hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, —C 1 -C 7 alkylheteroaryl, or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

R 7 is -L-R 10 , wherein

L is —C(O)—, -(Pep)-C(O)—, —C(O)N(H)—, —C(O)O—, —C(S)N(H)—, or —C(S)O—, wherein Pep is a polypeptide of 1-20 amino acids; and

R 10 is -aryl-R 9 , -heteroaryl-R 9 , —C 1 -C 7 alkyl-aryl-R 9 , —C 1 -C 7 alkyl-hetero aryl-R 9 , —C 1 -C 7 alkyl-R 8 , -aryl-C 1 -C 7 alkyl-R 8 , or -heteroaryl-C 1 -C 7 alkyl-R 8 , wherein

the aryl, heteroaryl, -alkyl-aryl, -aryl-alkyl, -alkyl-heteroaryl, and -heteroaryl-alkyl groups are optionally and independently substituted with one, two, or three groups which are each independently halomethyl, dihalomethyl, trihalomethyl, —C(O)R 11 , —CO(O)R 12 , —C(O)N(R 12 ) 2 , wherein

each R 11 is independently hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, or —C 1 -C 7 alkylheteroaryl; and each R 12 is independently R 11 or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

and

R 8 is —C(H)(COOR 3 )N(R 15 )-L 1 -(C 1 -C 7 )alkyl-R 9 , —C(H)(COOR 3 )N(R 15 )-L 1 -aryl-R 9 , —C(H)(COOR 3 )N(R 15 )-L 1 -heteroaryl-R 9 , —C(H)(COOR 3 )N(R 15 )-L 1 -aryl(C 1 -C 7 )alkyl-R 9 , —C(H)(COOR 3 )N(R 15 )-L 1 -heteroaryl(C 1 -C 7 )alkyl-R 9 , —C(H)(COOR 3 )N(R 15 )-L 1 -G-CH 2 CH 2 —R 9 , —C(H)(COOR 3 )N(R 15 )-L 1 -(C 1 -C 7 )alkyl-O—(C C 1 -C 7 )alkyl-R 9 , or —R 9 ,

wherein R 15 is hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, —C 1 -C 7 alkylheteroaryl, or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

L 1 is —C(O)—, —C(O)N(H)—, —C(O)O—, —C(S)N(H)—, or —C(S)O—; and

the aryl, heteroaryl, arylalkyl, and heteroarylalkyl groups are optionally substituted with one, two, or three groups which are each independently halomethyl dihalomethyl, trihalomethyl, —C(O)R 81 , —CO(O)R 82 , —C(O)N(R 82 ) 2 —, wherein

 each R 81 is independently hydrogen, —C 1 -C 7 alkyl, —C 1 -C 7 alkylaryl, or —C 1 -C 7 alkylheteroaryl; and

 each R 82 is independently R 81 or a protecting group selected from the group consisting of substituted benzyl, t-butyl ester, alkyl esters, and fluorenylmethoxycarbonyl groups;

G is —(CH 2 CH 2 O) q —, wherein q is an integer from 1 to 200;

R 9 is (i) —N 3 , —C≡CH—, —ONH 2 , —C(O)N(H)NH 2 , or —N(H)NH 2 ;

 (ii) a detectable label, a cytotoxic group, or biotin;

 (iii) a pendant group comprising either a detectable label, a cytotoxic group, or biotin; or

 (iv) a pendant group bonded to a solid support,

wherein the cytotoxic group is selected from the group consisting of chelated or bonded radioisotopes, photosensitizers, paclitaxel, camptothecin, doxorubicin, and lysosomal disrupting agents, and

wherein the pendant group is a group of the formula —(C 0 -C 10 alkyl-D) 0-1 -C 0 -C 10 alkyl-, wherein D is a bond, aryl, heteroaryl, C 3 -C 8 cycloalkyl, or heterocyclyl; and no more than one methylene in each alkyl group is optionally and independently replaced by —O—, —S—, —N(R 00 )—, —C(H)═C(H)—, —C(O)—, —S(O)—, —S(O) 2 —, —P(O)(OH)—, —OP(O)(OH)—, —P(O)(OH)O—, —N(R 00 )P(O)(OH)—, —P(O)(OH)N(R 00 )—, —OP(O)(OH)O—, —OP(O)(OH)N(R 00 )—, —N(R 00 )P(O)(OH)O—, —N(R 00 )P(O)(OH)N(R 00 )—, —C(O)O—, —C(O)N(R 00 )—, —OC(O)—, —N(R 00 )C(O)—, —S(O)O—, —OS(O)—, —S(O)N(R 00 )—, —N(R 00 )S(O)—, S(O) 2 O—, —OS(O) 2 —, —S(O) 2 N(R 00 )—, —N(R 00 )S(O) 2 —, —OC(O)O—, —OC(O)N(R 00 )—, —N(R 00 )C(O)O—, —N(R 00 )C(O)N(R 00 )—, —OS(O)O—, —OS(O)N(R 00 )—, —N(R 00 )S(O)O—, —N(R 00 )S(O)N(R 00 )—, —OS(O) 2 O—, —(OS)(O) 2 N(R 00 )—, —N(R 00 )S(O) 2 O—, or —N(R 00 )S(O) 2 N(R 00 )—, wherein each R 00 is independently hydrogen or C 1 -C 7 alkyl.

2. The compound of claim 1 , wherein R 8 is —C(H)(COOR 3 )N(H)C(O)(C 1 -C 7 )alkyl-R 9 , —C(H)(COOR 3 )N(H)C(O)hetero aryl-R 9 , —C(H)(COOR 3 )N(H)C(O)-G-CH 2 CH 2 —R 9 , —C(H)(COOR 3 )N(H)C(O)(C 1 -C 7 )alkyl-O—(C 1 -C 7 ) alkyl-R 9 , or —R 9 .

3. The compound of claim 1 , according to the formula,

and pharmaceutically acceptable salts thereof, wherein p is 0 or 1; R 20 is —C 1 -C 7 alkyl-R 9 , -aryl-R 9 , aryl(C 1 -C 7 ) alkyl-R 9 , or -heteroaryl-R 9 .

4. The compound of claim 1 , wherein R 1 and R 2 are each —C(O)OH.

5. The compound of claim 1 , wherein R 4 is —C(O)OH.

6. The compound of claim 1 , wherein each R 3 is hydrogen.

7. The compound of claim 1 , wherein R 9 is a detectable label.

8. A composition comprising a compound of any one of claims 1 - 5 , 6 and 7 together with a pharmaceutically acceptable carrier, excipient, and/or diluent.

9. The compound of claim 3 , wherein: L 1 is —C(O)— or —C(S)N(H)—; R 20 is -aryl-R 9 or aryl-C 1 alkyl-R 9 and R 9 is a detectable label.

10. The compound of claim 9 , wherein

R 1 and R 2 are —C(O)OR 3 and R 3 is H;

R 5 ═H;

Y═NR and R═H;

n=2;

X═O;

m=3;

R 6 ═H;

R 4 ═CO 2 H;

R 31 ═H;

p=1;

R 3 and R 15 ═H;

L 1 is —C(S)N(H)—;

R 20 is aryl-C 1 alkyl-R 9 ; and

R 9 is detectable label 177 Lu coordinated to chelating group 1,4,7,10-tetraazacyclododecanetetraacetic acid (DOTA).

Assignments (5)
CONFIRMATORY LICENSE Recorded Jun 10, 2019
From: WASHINGTON STATE UNIVERSITY
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 049415/0244 →
CONFIRMATORY LICENSE Recorded May 10, 2018
From: WAYNE STATE UNIVERSITY
To: NATIONAL INSTITUTES OF HEALTH (NIH), U.S. DEPT. OF HEALTH AND HUMAN SERVICES (DHHS), U.S. GOVERNMENT
Reel/Frame 046124/0964 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 17, 2013
From: BERKMAN, CLIFFORD E.
To: WASHINGTON STATE UNIVERSITY; THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
Reel/Frame 031218/0861 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 17, 2013
From: VANBROCKLIN, HENRY F.
To: THE REGENTS OF THE UNIVERSITY OF CALIFORNIA
Reel/Frame 031218/0955 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 20, 2013
From: WASHINGTON STATE UNIVERSITY RESEARCH FOUNDATION
To: WASHINGTON STATE UNIVERSITY
Reel/Frame 031043/0918 →
Continuity (2)
Provisional Application 61412917 · Nov 12, 2010
Related Publication 20140010758A1 · Jan 9, 2014