IP Library › Granted Patent US 9,393,294
Granted Patent B2
US 9,393,294 · App. 13/355,468 · Granted Jul 19, 2016

Vaccines and compositions against

Inventors: Todd Gierahn (Brookline, MA); Richard Malley (Beverly, MA)
Assignees: Genocea Biosciences, Inc.; Children's Medical Center Corporation
A61K39/092A61K38/04A61K39/02
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Quick Facts
Patent No.
US 9,393,294
App. No.
13/355,468
Granted
Jul 19, 2016
Kind
B2
Abstract

Streptococcus pneumoniae is a major health concern, especially in very young, elderly, or immunocompromized patients. The present disclosure provides, inter alia, certain highly effective vaccines and pharmaceutical compositions in Streptococcus pneumoniae . The antigens may be used therapeutically or prophylactically.

Claims (68)

1. A vaccine formulation comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 265, 266, or 268, or comprising the amino acid sequence of SEQ ID NO:265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a second isolated polypeptide comprising the amino acid sequence of SEQ ID NO:9 or 10, or comprising the amino acid sequence of SEQ ID NO:9 or 10 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

2. The vaccine formulation of claim 1 , further comprising a third isolated polypeptide comprising the amino acid sequence of SEQ ID NO:6 or 7, or comprising the amino acid sequence of SEQ ID NO:6 or 7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

3. The vaccine formulation of claim 2 , wherein the third polypeptide consists of the amino acid sequence of SEQ ID NO:6.

4. The vaccine formulation of claim 2 , wherein the third polypeptide consists of the amino acid sequence of SEQ ID NO:7.

5. A vaccine formulation comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising the amino acid sequence of SEQ ID NO:265, 266, or 268, or comprising the amino acid sequence of SEQ ID NO:265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a second isolated polypeptide comprising the amino acid sequence of SEQ ID NO:6 or 7, or comprising the amino acid sequence of SEQ ID NO:6 or 7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

6. The vaccine formulation of claim 1 or 5 , wherein the first polypeptide consists of the amino acid sequence of SEQ ID NO:265.

7. The vaccine formulation of claim 1 or 5 , wherein the first polypeptide consists of the amino acid sequence of SEQ ID NO:266.

8. The vaccine formulation of claim 1 or 5 , wherein the first polypeptide consists of the amino acid sequence of SEQ ID NO:268.

9. The vaccine formulation of claim 1 , wherein the second polypeptide consists of the amino acid sequence of SEQ ID NO:9.

10. The vaccine formulation of claim 1 or 5 , wherein one or more polypeptides are conjugated to an immunogenic carrier.

11. The vaccine formulation of claim 1 or 5 , which comprises at least one lipidated polypeptide.

12. The vaccine formulation of claim 5 , wherein the second polypeptide consists of the amino acid sequence of SEQ ID NO:6.

13. The vaccine formulation of claim 5 , wherein the second polypeptide consists of the amino acid sequence of SEQ ID NO:7.

14. A vaccine formulation comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 265, 266, or 268 or comprising the amino acid sequence of SEQ ID NO:265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both;

a second isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 6 or comprising the amino acid sequence of SEQ ID NO:6 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a third isolated polypeptide comprising the amino acid sequence of SEQ ID NO:7 or comprising the amino acid sequence of SEQ ID NO:7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

15. The vaccine formulation of claim 14 , wherein the second polypeptide is lipidated.

16. The vaccine formulation of claim 14 or 15 , further comprising one or both of:

a fourth isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 9 or comprising the amino acid sequence of SEQ ID NO: 9 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a fifth isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 10 or comprising the amino acid sequence of SEQ ID NO: 10 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

17. The vaccine formulation of claim 16 , wherein the fifth polypeptide is lipidated.

18. A vaccine formulation comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 265, 266, or 268 or comprising the amino acid sequence of SEQ ID NO: 265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both;

a second isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 9 or comprising the amino acid sequence of SEQ ID NO: 9 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a third isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 10 or comprising the amino acid sequence of SEQ ID NO: 10 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

19. The vaccine formulation of claim 18 , wherein the third polypeptide is lipidated.

20. A vaccine formulation comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 265 or comprising the amino acid sequence of SEQ ID NO:265 lacking 1-3 amino acids from the N-terminus, C-terminus, or both;

a second isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 6 or comprising the amino acid sequence of SEQ ID NO:6 lacking 1-3 amino acids from the N-terminus, C-terminus, or both;

a third isolated polypeptide comprising the amino acid sequence of SEQ ID NO:7 or comprising the amino acid sequence of SEQ ID NO:7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both;

a fourth isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 9 or comprising the amino acid sequence of SEQ ID NO: 9 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a fifth isolated polypeptide comprising the amino acid sequence of SEQ ID NO: 10 or comprising the amino acid sequence of SEQ ID NO: 10 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

21. The vaccine formulation of claim 20 , wherein the adjuvant is alum.

22. The vaccine formulation of claim 20 , wherein the vaccine formulation comprises 1-1000 μg of each polypeptide.

23. The vaccine formulation of any one of claim 1 , 5 , 14 , 18 , or 20 , wherein upon administration to a subject, the vaccine formulation induces an immune response against S. pneumoniae.

24. A pharmaceutical composition comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:265, 266, or 268, or comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a second isolated polypeptide comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:9 or 10, or comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:9 or 10 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

25. The pharmaceutical composition of claim 24 , further comprising a third isolated polypeptide comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:6 or 7, or comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:6 or 7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

26. A pharmaceutical composition comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first isolated polypeptide comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:265, 266, or 268, or comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a second isolated polypeptide comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:6 or 7, or comprising an amino acid sequence at least 98% identical to the amino acid sequence of SEQ ID NO:6 or 7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

27. The pharmaceutical composition of 90 or 92, wherein upon administration to a subject, the pharmaceutical composition induces an immune response against S. pneumoniae.

28. A pharmaceutical composition comprising:

a pharmaceutically acceptable carrier;

an effective amount of an adjuvant;

a first polypeptide comprising an amino acid sequence from a strain of S. pneumoniae that corresponds to the amino acid sequence of SEQ ID NO: 265, 266, or 268, or to the amino acid sequence of SEQ ID NO:265, 266, or 268 lacking 1-3 amino acids from the N-terminus, C-terminus, or both; and

a second polypeptide comprising an amino acid sequence from a strain of S. pneumoniae that corresponds to the amino acid sequence of SEQ ID NO:9 or 10, or to the amino acid sequence of SEQ ID NO:9 or 10 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

29. The pharmaceutical composition of claim 28 , further comprising a third polypeptide comprising an amino acid sequence from a strain of S. pneumoniae that corresponds to the amino acid sequence of SEQ ID NO:6 or 7, or to the amino acid sequence of SEQ ID NO:6 or 7 lacking 1-3 amino acids from the N-terminus, C-terminus, or both.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 14, 2012
From: MALLEY, RICHARD
To: CHILDREN'S MEDICAL CENTER CORPORATION
Reel/Frame 027859/0415 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 14, 2012
From: GIERAHN, TODD
To: GENOCEA BIOSCIENCES, INC.
Reel/Frame 027859/0709 →
Continuity (2)
Provisional Application 61434818 · Jan 20, 2011
Related Publication 20120189649A1 · Jul 26, 2012