Integrated microfluidic radioassay and imaging platform for small sample analysis
An immunocapture-based in vitro kinase assay on an integrated polydimethylsiloxane (PDMS) microfluidics platform that can reproducibly measure kinase activity from as few as 3,000 cells is described. For this platform, the standard radiometric 32 P-ATP labeled phosphate transfer assay was adopted. Implementation on a microfluidic device required the development of methods for repeated trapping and mixing of solid-phase affinity micro beads. A solid state beta-particle camera imbedded directly below the microfluidic device was used to provide real-time quantitative detection of the signal from this and other microfluidic radio bioassays. The integrated device can measure ABL protein kinase activity from BCR-ABL positive leukemia patient samples, and can measure the small molecule phosphorylation such as phosphorylation of the deoxycytidine analog 18 F-FAC by deoxycytidine kinase (dCK) isolated from cell lysates.
1. An apparatus for performing a microfluidic radioactivity based assay, comprising:
a microfluidic chip with a microchannel system and at least one reaction element adapted to capture radioactively labeled molecules, the reaction element comprising:
a plurality of reaction columns retaining surface functionalized beads fluidly connected to the microchannel system of the microchip; and
a circulation chamber fluidic circuit fluidly connected to an entry port and to an exit port of each reaction column; and
a solid state radiation detector coupled to the microfluidic chip;
wherein radiation emitted from said microfluidic chip is detected; and
wherein said functionalized beads can be removed from the reaction column to the circulation chamber through the exit port, mixed and returned to the reaction column through the column entry port.
2. An apparatus as recited in claim 1 , wherein said
surface functionalized beads retained in the plurality of reaction columns comprise affinity beads.
3. An apparatus as recited in claim 1 , wherein said surface functionalized beads are functionalized with a coating of a plurality of enzyme specific antibodies, and wherein enzymes disposed in a liquid flowing through the reaction column bind to the antibodies on the surface of the beads.
4. An apparatus as recited in claim 3 , wherein said surface functionalized beads comprise Protein G polystyrene beads functionalized with a coating of kinase specific antibodies.
5. An apparatus as recited in claim 1 , wherein said microchannel system further comprises:
at least one second reaction element within a flow path of the first reaction element.
6. An apparatus as recited in claim 5 , wherein said second reaction element comprises:
at least one second reaction column retaining affinity beads fluidly connected to the first reaction column; and
wherein reaction substrates released from the first reaction column are captured by the second reaction column.
7. An apparatus as recited in claim 5 , wherein said second reaction element comprises:
at least one second reaction column retaining surface functionalized beads fluidly connected to the first reaction column;
wherein reaction substrates released from the first reaction column are captured by the second reaction column.
8. An apparatus as recited in claim 1 , wherein said radiation detector comprises:
a position sensitive avalanche photodiode (PSAPD)-based solid state beta camera;
wherein beta radiation emissions from the microfluidic chip are detected and quantified by the camera.
9. An apparatus as recited in claim 8 , wherein said radiation detector further comprises:
an aluminated Mylar film on a top surface of said radiation detector; and
a Mylar sheet coupled to said aluminated Mylar film and said microfluidic chip disposed on a top surface of said Mylar sheet;
wherein the radiation detector is shielded from visible light by the aluminated Mylar film and Mylar sheet.
10. An apparatus for performing a microfluidic radioactivity based assay, comprising:
a microfluidic chip comprising:
a microchannel system;
a plurality of reaction columns configured to retain surface functionalized beads and adapted to capture radioactively labeled molecules and fluidly connected to the microchannel system;
at least one mixing chamber fluidly connected to each of said reaction columns with at least two ports, said mixing chamber configured to receive, mix and recycle said surface functionalized beads to said reaction columns;
a fluidic control system configured to control a fluid flow and a flow of surface functionalized beads through the microchannel system, mixing chambers and reaction columns; and
a solid state radiation detector coupled to the microfluidic chip;
wherein radiation emitted from said microfluidic chip is detected.
11. An apparatus as recited in claim 10 , wherein said radiation detector comprises:
a position sensitive avalanche photodiode (PSAPD)-based solid state beta camera;
wherein beta radiation emissions from the microfluidic chip are detected and quantified by the camera.
12. An apparatus as recited in claim 11 , wherein said radiation detector further comprises:
an aluminated Mylar film on a top surface of said radiation detector; and
a Mylar sheet coupled to said aluminated Mylar film and said microfluidic chip disposed on a top surface of said Mylar sheet;
wherein the radiation detector is shielded from visible light by the aluminated Mylar film and Mylar sheet.
13. An apparatus as recited in claim 10 , wherein said surface functionalized beads are functionalized with a coating of a plurality of enzyme specific antibodies, wherein enzymes disposed in a liquid flow through the reaction column bind to the antibodies on the surface of the beads.
14. An apparatus as recited in claim 10 , wherein said surface functionalized beads comprise Protein G polystyrene beads functionalized with a coating of a plurality of a kinase specific antibody.
15. An apparatus as recited in claim 10 , wherein said reaction columns comprise:
a first reaction column fluidly connected to a second reaction column,
wherein an output from the first reaction column flows through the second reaction column.
16. An apparatus for performing a microfluidic kinase radioactivity based assay, comprising:
a microfluidic chip comprising:
a microchannel system;
a plurality of first reaction columns fluidly connected to the microchannel system configured to retain surface functionalized beads coated with a kinase specific antibody and adapted to allow kinase reactions with at least one radioactive substrate;
a circulation chamber fluidic circuit fluidly connected to an entry port and to an exit port of each first reaction column, wherein a fluid comprising said surface functionalized beads flowing from the exit port of the first reaction column is circulated through the circulation chamber and back into a reaction element through the entry port of the first reaction column;
a second reaction column adapted to capture radioactively labeled molecules, said second column fluidly connected to at least one first reaction column;
a fluidic control system configured to control fluid flow through the microchannel system, circulation chamber and first and second reaction columns; and
a solid state radiation detector coupled to the microfluidic chip;
wherein kinases from a sample cell lysate bind to the kinase specific antibodies of the functionalized beads of the reaction columns and are captured;
wherein the captured kinases react with at least one radioactive substrate to produce a radioactive reaction product; and
wherein radiation emitted from said microfluidic chip is detected.
17. An apparatus as recited in claim 16 , wherein said second reaction column is configured to retain solid state anion exchange beads.
18. An apparatus as recited in claim 16 , wherein said kinase is a protein kinase.
19. An apparatus as recited in claim 16 , wherein cycles of bead trapping, release and resuspension permit bead washing and solution exchanges to be performed within the first reaction column.
20. An apparatus as recited in claim 16 , further comprising:
a computer and programming operably coupled to the fluidic control system and the radiation detector;
wherein the control of timing and sequence of fluid flow through the microfluidic chip are controlled by computer programming; and
wherein radiation detection is controlled and recorded.