IP Library Granted Patent US 9,457,039
Granted Patent B2
US 9,457,039 · App. 14/436,687 · Granted Oct 4, 2016

2′-disubstituted nucleoside derivatives and methods of use thereof for the treatment of viral diseases

Inventors: Vinay Girijavallabhan (Whippany, NJ); Stephane Bogen (Somerset, NJ); Weidong Pan (Hillsborough, NJ); Qun Dang (Westfield, NJ); Ian Davies (Princeton, NJ)
Assignee: Merck Sharp & Dohme Corp.
A61K31/706A61K31/7056A61K38/21A61K45/06C07D487/04C07H7/06
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Quick Facts
Patent No.
US 9,457,039
App. No.
14/436,687
Granted
Oct 4, 2016
Kind
B2
Abstract

2′-disubstituted substituted nucleoside derivatives of formula (I) and pharmaceutically acceptable salts thereof are disclosed: (1), wherein A is N 3 or NH 2 and X, Y, R 1 , R 2 , R 3 , R 4 , R 5 and R 18 are as defined herein. Compositions comprising at least one 2′-disubstituted nucleoside derivative, and methods of using the 2′-disubstituted nucleoside derivatives for treating or preventing HCV infection in a patient are disclosed.

Claims (53)

1. A compound having the formula (I):

or a pharmaceutically acceptable salt thereof,

wherein:

A is —NH 2 ;

X is O, N, S or CH 2 ;

Y is N or —C(R 6 )—;

R 1 is H,

R 2 is H, —C(O)—(C 1 -C 6 alkyl) or

or R 1 and R 2 join to form a group having the formula:

R 3 is C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl or C 3 -C 7 cycloalkyl;

R 4 and R 5 are each independently selected from H, —OR 12 , —NHC(O)OR 12 , —NHC(O)N(R 12 ) 2 , —N(R 12 ) 2 and —NHC(O)R 12 ;

R 6 is H, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, halo, —OR 12 , —SR 12 , —N(R 12 ) 2 , C 3 -C 7 cycloalkyl, C 6 -C 10 aryl, 5- or 6-membered monocyclic heteroaryl or 9- or 10-membered bicyclic heteroaryl;

R 7 is H, C 6 -C 10 aryl, 5- or 6-membered monocyclic heteroaryl, 9- or 10-membered bicyclic heteroaryl, or —(C 1 -C 3 alkylene)-C(O)O—(C 1 -C 6 alkyl), wherein said C 6 -C 10 aryl group, said 5- or 6-membered monocyclic heteroaryl group and said 9- or 10-membered bicyclic heteroaryl group can be optionally substituted with R 13 ,

R 8 is H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, phenyl or benzyl, wherein said C 1 -C 6 alkyl can be optionally substituted with a group selected from halo, —OR 12 , —SR 12 , guanidino, —N(R 12 ) 2 , —C(O)OR 12 , —C(O)N(R 12 ) 2 , —NHC(O)R 12 , 5- or 6-membered monocyclic heteroaryl and 9- or 10-membered bicyclic heteroaryl, and wherein said phenyl group and said benzyl group can be optionally substituted with up to 2 groups, each independently selected from C 1 -C 6 alkyl, halo and —OR 12 ;

R 9 is H, C 1 -C 6 alkyl, C 3 -C 7 cycloalkyl, phenyl or benzyl, wherein said C 1 -C 6 alkyl can be optionally substituted with a group selected from halo, —OR 12 , —SR 12 , guanidino, —N(R 12 ) 2 , —C(O)OR 12 , —C(O)N(R 12 ) 2 , —NHC(O)R 12 , 5- or 6-membered monocyclic heteroaryl and 9- or 10-membered bicyclic heteroaryl, and wherein said phenyl group and said benzyl group can be optionally substituted with up to 2 groups, each independently selected from C 1 -C 6 alkyl, halo and —OR 12 ;

R 10 is H, C 1 -C 20 alkyl, C 2 -C 20 alkenyl, —(C 1 -C 3 alkylene) m -(C 3 -C 7 cycloalkyl), —(C 1 -C 3 alkylene) m -(C 6 -C 10 aryl) or —(C 1 -C 3 alkylene) m -adamantyl, wherein said C 1 -C 20 alkyl group, said C 2 -C 20 alkenyl group, said C 6 -C 10 aryl group and said adamantyl group can be optionally substituted with up to three groups, each independently selected from halo, —OR 12 , —C(O)OR 12 , CN, NO 2 , C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, C 3 -C 7 cycloalkyl, C 6 -C 10 aryl, 5- or 6-membered monocyclic heteroaryl, 9- or 10-membered bicyclic heteroaryl, —N(R 12 ) 2 , —C(O)N(R 12 ) 2 —SR 12 , —S(O)R 12 , —S(O) 2 R 12 , —S(O) 2 N(R 12 ) 2 , —NHC(O)R 12 , —NHC(O)OR 12 and —NHC(O)N(R 12 ) 2 ;

R 11 is H, C 1 -C 20 alkyl, C 2 -C 20 alkenyl, —(C 1 -C 3 alkylene) m -(C 3 -C 7 cycloalkyl), C 3 -C 7 cycloalkyl, —(C 1 -C 3 alkylene) m -C 6 -C 10 aryl or —(C 1 -C 3 alkylene) m -adamantyl, 5- or 6-membered monocyclic heteroaryl, 9- or 10-membered bicyclic heteroaryl, wherein said C 1 -C 20 alkyl group, said C 2 -C 20 alkenyl group, said C 6 -C 10 aryl group, said adamantyl group, said 5- or 6-membered monocyclic heteroaryl group and said 9- or 10-membered bicyclic heteroaryl group can be optionally substituted with up to five groups, each independently selected from C 1 -C 6 alkyl, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, C 3 -C 7 cycloalkyl, C 6 -C 10 aryl, 5- or 6-membered monocyclic heteroaryl, 9- or 10-membered bicyclic heteroaryl, halo, —OR 12 , —SR 12 , —S(O)R 12 , —S(O) 2 R 12 , —S(O) 2 N(R 12 ) 2 , C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —O—(C 1 -C 6 haloalkyl), —CN, —NO 2 , —N(R 12 ) 2 , —C(O)OR 12 , —C(O)N(R 12 ) 2 and —NHC(O)R 12 , —NHC(O)OR 12 and —NHC(O)N(R 12 ) 2 ;

each occurrence of R 12 is independently H, C 1 -C 10 alkyl, C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —(C 1 -C 3 alkylene) m -(C 3 -C 7 cycloalkyl) m -(C 1 -C 3 alkylene) m -(C 6 -C 10 aryl), —(C 1 -C 3 alkylene) m -(4 to 7-membered heterocycloalkyl), —(C 1 -C 3 alkylene) m -(5- or 6-membered monocyclic heteroaryl) or —(C 1 -C 3 alkylene) m -(9- or 10-membered bicyclic heteroaryl), wherein said C 3 -C 7 cycloalkyl group, said C 6 -C 10 aryl group, said 4 to 7-membered heterocycloalkyl group, said -5- or 6-membered monocyclic heteroaryl group or said 9- or 10-membered bicyclic heteroaryl group can be optionally substituted with R 16 ;

R 13 represents from one to five substituent groups, each independently selected from C 1 -C 6 alkyl, halo, —OR 12 , —SR 12 , C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —O—(C 1 -C 6 haloalkyl), —CN, —NO 2 , —N(R 12 ) 2 , —C(O)OR 12 , —C(O)N(R 12 ) 2 and —NHC(O)R 12 , or any two R 13 groups on adjacent ring carbon atoms can combine to form —O—R 14 —O—;

R 14 is [C(R 15 ) 2 ] n —;

each occurrence of e is independently H or C 1 -C 6 alkyl;

R 16 represents from one to five substituent groups, each independently selected from C 1 -C 6 alkyl, C 2 -C 6 alkenyl, C 2 -C 6 alkynyl, halo, —OR 17 , —SR 17 , C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —O—(C 1 -C 6 haloalkyl), —CN, —NO 2 , —N(R 17 ) 2 , —C(O)OR 17 , —C(O)N(R 17 ) 2 and —NHC(O)R 17 ;

each occurrence of R 17 is independently H, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, C 1 -C 6 hydroxyalkyl, —(C 1 -C 3 alkylene) m -(C 3 -C 7 cycloalkyl) m -(C 1 -C 3 alkylene) m -(C 6 -C 10 aryl), —(C 1 -C 3 alkylene) m -(4 to 7-membered heterocycloalkyl), —(C 1 -C 3 alkylene) m -(5- or 6-membered monocyclic heteroaryl) or —(C 1 -C 3 alkylene) m -(9- or 10-membered bicyclic heteroaryl);

R 18 is H, C 1 -C 6 alkyl, —O(C 1 -C 6 alkyl), C 1 -C 6 alkynyl, C 1 -C 6 alkenyl, or CN; and

each occurrence of m is independently 0 or 1, and

each occurrence of n is independently 1, 2, or 3.

2. The compound of claim 1 , wherein X is O.

3. The compound of claim 2 , wherein R 3 is methyl.

4. The compound of claim 1 having the formula:

or a pharmaceutically acceptable salt thereof,

wherein:

R 1 is H,

R 2 is H, or R 1 and R 2 join to form a group having the formula:

R 4 is H, OH or —N(R 12 ) 2 ;

R 5 is H or NH 2 ,

R 18 is H, —CN or —OCH 3 ;

R 7 is —(C 1 -C 3 alkylene)-C(O)O—(C 1 -C 6 alkyl) or phenyl, wherein said phenyl group can be optionally substituted with a halo group;

R 8 and R 9 are each independently H or C 1 -C 6 alkyl;

R 10 is C 1 -C 6 alkyl; and

R 11 is C 1 -C 6 alkyl or C 3 -C 7 cycloalkyl.

5. The compound of claim 4 , wherein R 1 is:

6. The compound of claim 4 , wherein R 1 and R 2 join to form a group having the formula:

7. The compound of claim 5 , wherein R 1 is:

8. The compound of claim 6 , wherein R 1 and R 2 join to form a group having the structure:

9. The compound of claim 4 , wherein Y is N or CH, R 4 is NH 2 and R 5 is H.

10. The compound of claim 1 having the structure:

or a pharmaceutically acceptable salt thereof.

11. A pharmaceutical composition comprising an effective amount of the compound of claim 1 or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier.

12. The pharmaceutical composition according to claim 11 , further comprising a second therapeutic agent selected from the group consisting of HCV antiviral agents, immunomodulators, and anti-infective agents.

13. The pharmaceutical composition according to claim 12 , further comprising a third therapeutic agent selected from the group consisting of HCV protease inhibitors, HCV NS5A inhibitors and HCV NS5B polymerase inhibitors.

14. A method of treating a patient infected with HCV comprising the step of administering an amount of (i) the compound according to claim 1 , or a pharmaceutically acceptable salt thereof, or (ii) a pharmaceutical composition comprising said compound and a pharmaceutically acceptable carrier effective to treat infection by HCV in said patient.

15. The method according to claim 14 , further comprising the step of administering pegylated-interferon alpha and an HCV protease inhibitor to said patient.

16. The method according to claim 14 further comprising the step of administering ribavirin to said patient.

Assignments (2)
MERGER Recorded Aug 8, 2022
From: MERCK SHARP & DOHME CORP.
To: MERCK SHARP & DOHME LLC
Reel/Frame 061102/0145 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 5, 2015
From: GIRIJAVALLABHAN, VINAY; BOGEN, STEPHANE; PAN, WEIDONG; DANG, QUN; DAVIES, IAN
To: MERCK SHARP & DOHME CORP.
Reel/Frame 035566/0207 →
Continuity (2)
Provisional Application 61715017 · Oct 17, 2012
Related Publication 20160045526A1 · Feb 18, 2016