Lysosome-cleavable linker
The present invention relates to a linker for forming conjugates of a protein or peptide with a therapeutically active agent and which comprise a thiomaleamic acid moiety that is susceptible to cleavage under the pH conditions prevalent in the lysosome.
1. A compound of formula (Ia), (Ib) or (Ic)
wherein:
R 1 is an antibody or antibody fragment, wherein said antibody or antibody fragment is capable of binding to an antigen;
R 2 is a therapeutically active agent;
R 3 is a linker moiety or a bond; and
R 4 is a hydrogen or halogen atom or a C 1-20 alkyl, C 2-20 alkenyl or C 2-20 alkynyl group, which group is unsubstituted or substituted by one or more substituents selected from halogen atoms and sulfonic acid groups, and in which (a) 0, 1 or 2 carbon atoms are replaced by groups selected from C 6-10 arylene, 5- to 10-membered heteroarylene, C 3-7 carbocyclylene and 5- to 10-membered heterocyclylene groups, and (b) 0, 1 or 2 —CH 2 — groups are replaced by groups selected from —O—, —S—, —S—S—, —C(O)— and —N(C 1-6 alkyl)- groups, wherein:
(i) said arylene, heteroarylene, carbocyclylene and heterocyclylene groups are unsubstituted or substituted by one or more substituents selected from halogen atoms and C 1-6 alkyl, C 1-6 alkoxy, C 1-6 alkylthiol, —N(C 1-6 alkyl)(C 1-6 alkyl), nitro and sulfonic acid groups; and
(ii) 0, 1 or 2 carbon atoms in said carbocyclylene and heterocyclylene groups are replaced by —C(O)— groups;
R 1 being linked to the 2-position of the moiety of formula (Ia) via a first sulfur atom attached to the 2-position of the moiety of formula (Ia); R 1 being linked to the 3-position of the moiety of formula (Ib) via a first sulfur atom attached to the 3-position of the moiety of formula (Ib); and R 1 being linked to the 2-position of the moiety of formula (Ic) via a first sulfur atom attached to the 2-position of the moiety of formula (Ic) and R 1 being linked to the 3-position of the moiety of formula (Ic) via a second sulfur atom attached to the 3-position of the moiety of formula (Ic).
2. A compound according to claim 1 , wherein said first sulfur atom is the sulfur atom of a first cysteine residue in R 1 .
3. A compound according to claim 2 , which is a compound of formula (Ic) and wherein said second sulfur atom is the sulfur atom of a second cysteine residue in R 1 .
4. A compound according to claim 3 , wherein said first sulfur atom and said second sulfur atom are attached to one another via a disulfide bridge —S—S— when the protein or peptide is in isolated form.
5. A compound according to claim 1 , wherein R 1 is capable of specific binding to a target cell.
6. A compound according to claim 5 , wherein R 1 is capable of specific binding to a cancer cell.
7. A compound according to claim 1 , wherein said antibody or antibody fragment is capable of specific binding to an antigen selected from MY9, B4, EpCAM, CD2, CD3, CD4, CD5, CD6, CD11, CD19, CD20, CD22, CD25, CD26, CD30, CD33, CD37, CD38, CD40, CD44, CD56, CD64, CD70, CD74, CD79, CD105, CD138, CD205, CD227, EphA receptors, EphB receptors, EGFR, EGFRvIII, HER2, HER3, BCMA, PSMA, Lewis Y, mesothelin, cripto, alpha(v)beta3, alpha(v)beta5, alpha(v) beta6 integrin, C242, CA125, GPNMB, ED-B, TMEFF2, FAP, TAG-72, GD2, CAIX and 5T4.
8. A compound according to claim 1 , wherein R 2 has greater therapeutic activity following hydrolysis of the compound of formula (Ia), (Ib) or (Ic) than when it forms part of the compound of formula (Ia), (Ib) or (Icy.
9. A compound according to claim 1 , wherein R 2 is a cytotoxic agent.
10. A compound according to claim 1 , wherein R 2 is selected from anthracyclines, auristatins, maytansinoids, calicheamicins, taxanes, benzodiazepines and duocarmycins.
11. A compound according to claim 1 , wherein R 1 is an antibody or antibody fragment that is capable of specific binding to a cancer cell and R 2 is a cytotoxic agent.
12. A compound according to claim 1 , wherein the compound of formula (Ia), (Ib) or (Ic) is capable of hydrolyzing at a pH of from 4 to 5 to release a fragment of the formula H 2 N—R 3 —R 2 .
13. A compound according to claim 1 , wherein R 3 is a linker moiety that is capable of hydrolyzing to release the therapeutically active agent.
14. A compound according to claim 1 , wherein R 3 is a linker moiety that is a C 1-20 alkylene group, a C 2-20 alkenylene group or a C 2-20 alkynylene group, which is unsubstituted or substituted by one or more substituents selected from halogen atoms and sulfonic acid groups, and in which (a) 0, 1 or 2 carbon atoms are replaced by groups selected from C 6-10 arylene, 5- to 10-membered heteroarylene, C 3-7 carbocyclylene and 5- to 10-membered heterocyclylene groups, and (b) 0, 1 or 2 —CH 2 — groups are replaced by groups selected from —O—, —S—, —S—S—, —C(O)—, —NH—, —N(C 1-6 alkyl)-, —O—C(O)—, —O—C(O)—NH—, —NH—C(O)— and —NH—C(O)—O— groups, wherein:
(i) said arylene, heteroarylene, carbocyclylene and heterocyclylene groups are unsubstituted or substituted by one or more substituents selected from halogen atoms and nitro, carboxyl, cyano, acyl, acylamino, carboxamide, sulfonamide, trifluoromethyl, phosphate, C 1-6 alkyl, C 6-10 aryl, 5- to 10-membered heteroaryl, C 3-7 carbocyclyl, 5- to 10-membered heterocyclyl, —OR x , —SR x , —N(R x )(R y ) and —SO 2 —R x groups, wherein R x and R y are independently selected from hydrogen atoms and C 1-6 alkyl and C 6-10 aryl groups; and
(ii) 0, 1 or 2 carbon atoms in said carbocyclylene and heterocyclylene groups are replaced by —C(O)— groups.
15. A compound according to claim 1 , wherein R 3 is a linker moiety containing a phenylene group attached to the nitrogen atom at the 5-position in the compound of formula (Ia), (Ib) or (Ic), said phenylene group being unsubstituted or substituted by one or more substituents selected from halogen atoms and nitro, carboxyl, cyano, acyl, acylamino, carboxamide, sulfonamide, trifluoromethyl, phosphate, C 1-6 alkyl, C 6-10 aryl, 5- to 10-membered heteroaryl, C 3-7 carbocyclyl, 5- to 10-membered heterocyclyl, —OR x , —SR X , —N(R x )(R y ) and —SO 2 —R x groups, wherein R x and R y are independently selected from hydrogen atoms and C 1-6 alkyl and C 6-10 aryl groups.
16. A compound according to claim 1 , wherein R 3 is a linker moiety that, together with the group R 2 , comprises a carbamate moiety of formula —O—C(O)—N(H)— or —N(H)—C(O)—O—.
17. A compound according to claim 1 , wherein R 3 is a linker moiety of formula -[A]-[B]-[C]-, wherein:
[A] is a phenylene group that is unsubstituted or substituted by one or more substituents selected from halogen atoms and nitro, carboxyl, cyano, acyl, acylamino, carboxamide, sulfonamide, trifluoromethyl, phosphate, C 1-6 alkyl, C 6-10 aryl, 5- to 10-membered heteroaryl, C 3-7 carbocyclyl, 5- to 10-membered heterocyclyl, —OR x , —SR X , —N(R x )(R y ) and —SO 2 —R x groups, wherein R x and R y are independently selected from hydrogen atoms and C 1-6 alkyl and C 6-10 aryl groups;
[B] is a bond or a C 1-6 alkyl group; and
[C] is a group of formula —O—C(O)—NH—, —O—C(O)—, —N(H)—C(O)—O— or —N(H)—C(O)—, such that the fragment —[C]—[R 2 ]— is attached to the fragment -[A]-[B]- via a carbamate moiety of formula —O—C(O)—N(H)— or —N(H)—C(O)—O—.
18. A compound according to claim 17 , wherein R 3 is a linker moiety of formula
19. A compound according to claim 1 , wherein R 3 is a bond and wherein the compound of formula (Ia), (Ib) or (Ic) is capable of hydrolyzing at a pH of from 4 to 5 to release a fragment of formula H 2 N—R 2 .
20. A compound according to claim 1 , wherein the compound of formula (Ia), (Ib) or (Ic) is not capable of hydrolyzing to release the therapeutically active agent or a fragment of formula H 2 N—R 3 —R 2 or H 2 N—R 2 at a pH of 7 or higher.
21. A compound according to claim 1 , wherein R 4 is a hydrogen or halogen atom or an unsubstituted C 1-6 alkyl, C 2-6 alkenyl or C 2-6 alkynyl group, in which (a) 0 or 1 carbon atom is replaced by a group selected from phenylene, 5- to 6-membered heteroarylene, C 5-6 carbocyclylene and 5- to 6-membered heterocyclylene groups, wherein said phenylene, heteroarylene, carbocyclylene and heterocyclylene groups are unsubstituted or substituted by one or two substituents selected from halogen atoms and C 1-4 alkyl and C 1-4 alkoxy groups, and (b) 0, 1 or 2 —CH 2 — groups are replaced by groups selected from —O—, —S— and —C(O)— groups.
22. A compound according to claim 21 , wherein R 4 is a hydrogen atom or an unsubstituted C 1-6 alkyl group.
23. A pharmaceutical composition comprising:
(i) a compound of formula (Ia), (Ib) or (Ic)
wherein:
R 1 is an antibody or antibody fragment, wherein said antibody or antibody fragment is capable of binding to an antigen;
R 2 is a therapeutically active agent;
R 3 is a linker moiety or a bond; and
R 4 is a hydrogen or halogen atom or a C 1-20 alkyl, C 2-20 alkenyl or C 2-20 alkynyl group, which group is unsubstituted or substituted by one or more substituents selected from halogen atoms and sulfonic acid groups, and in which (a) 0, 1 or 2 carbon atoms are replaced by groups selected from C 6-10 arylene, 5- to 10-membered heteroarylene, C 3-7 carbocyclylene and 5- to 10-membered heterocyclylene groups, and (b) 0, 1 or 2 —CH 2 — groups are replaced by groups selected from —O—, —S—, —S—S—, —C(O)— and —N(C 1-6 alkyl)- groups, wherein:
(i) said arylene, heteroarylene, carbocyclylene and heterocyclylene groups are unsubstituted or substituted by one or more substituents selected from halogen atoms and C 1-6 alkyl, C 1-6 alkoxy, C 1-6 alkylthiol, —N(C 1-6 alkyl)(C 1-6 alkyl), nitro and sulfonic acid groups; and
(ii) 0, 1 or 2 carbon atoms in said carbocyclylene and heterocyclylene groups are replaced by —C(O)— groups;
R 1 being linked to the 2-position of the moiety of formula (Ia) via a first sulfur atom attached to the 2-position of the moiety of formula (Ia); R 1 being linked to the 3-position of the moiety of formula (Ib) via a first sulfur atom attached to the 3-position of the moiety of formula (Ib); and R 1 being linked to the 2-position of the moiety of formula (Ic) via a first sulfur atom attached to the 2-position of the moiety of formula (Ic) and R 1 being linked to the 3-position of the moiety of formula (Ic) via a second sulfur atom attached to the 3-position of the moiety of formula (Ic); and
(ii) a pharmaceutically acceptable diluent or carrier.
24. A method of ameliorating or reducing the incidence of cancer in a subject, which method comprises the administration to the said subject of an effective amount of a compound of claim 1 .