IP Library › Granted Patent US 10,227,350
Granted Patent B2
US 10,227,350 · App. 15/711,902 · Granted Mar 12, 2019

Phosphatidylinositol 3-kinase inhibitors

Inventors: Jayaraman Chandrasekhar (Redmond, WA); Leena Patel (Seattle, WA); Stephane Perreault (Brier, WA); Gary Phillips (Issaquah, WA); Nicholas Alexander Till (Bainbridge Island, WA); Jennifer Anne Treiberg (Redmond, WA)
Assignee: Gilead Sciences, Inc.
C07D487/04A61K31/4184A61K31/4196A61K31/4409A61K31/4709A61K31/506A61K31/519C07D401/14C07D403/14C07D413/14C07D417/14C07D487/02
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Quick Facts
Patent No.
US 10,227,350
App. No.
15/711,902
Granted
Mar 12, 2019
Kind
B2
Abstract

The present application provides the compounds of formula I or pharmaceutically acceptable salts, isomers, tautomer, or a mixture thereof, wherein s, t, n, R 1 , R 2 , R 3 , R 4 , R 5 , and R 6 are as described herein.

Claims (185)

1. A compound having the structure of formula (I):

wherein n is 1, 2, 3 or 4;

s is 1 or 2;

t is 1 or 2;

each R 1 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 100 ;

R 2 is selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R, —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 101 ;

R 3 is selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —N(R a )C(O)NR a R b , —OC(O)NR a R b , —NR a S(O) 2 NR a R b , —NR a S(O) 2 R a , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 102 ;

R 4 is a 5-10 membered heteroaryl;

wherein said 5-10 membered heteroaryl is optionally substituted with one to four R 103 ;

each R 5 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —N(R a )C(O)NR a R b , —OC(O)NR a R b , —NR a S(O) 2 NR a R b , —NR a S(O) 2 R a , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 104 ;

each R 6 is independently hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl or C 2-6 alkynyl;

each R a and R b is independently selected from hydrogen, C 1-6 alkyl, C 2-6 alkenyl and C 2-6 alkynyl;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, is optionally substituted with one to four R 200 ;

each R 100 , R 101 , R 102 , R 103 and R 104 is independently selected from hydrogen, halo, cyano, hydroxy, amino, oxo, thioxo, vinyl, —C(O)R c , —C(O)OR c , —C(O)NR c R d , —N(R c )C(O)R d , —N(R a )C(O)NR a R b , —OC(O)NR a R b , —NR a S(O) 2 NR a R b , —NR a S(O) 2 R a , —S(O)NR c R d , —S(O) 2 NR c R d , —S(O)R g , —S(O) 2 R g , —NR c R d , —OR c , —SR d , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 201 ;

each R c and R d is independently selected from hydrogen, C 6-10 aryl, C 1-6 alkyl, C 2-6 alkenyl and C 2-6 alkynyl;

each R 200 and R 201 is independently selected from hydrogen, halo, cyano, hydroxy, amino, oxo, thioxo, vinyl, —C(O)R e , —C(O)OR e , —C(O)NR e R f , —N(R e )C(O)R f , —S(O)NR e R f , —S(O) 2 NR e R f , —S(O)R g , —S(O) 2 R g , —NR e R f , —OR e , —SR e , C 1-6 alkyl, C 2-6 alkenyl and C 2-6 alkynyl;

each R e and R f is independently selected from hydrogen, C 1-6 alkyl, C 2-6 alkenyl and C 2-6 alkynyl;

each R g is independently selected from C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 200 ;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

2. The compound of claim 1 having the structure of formula IA:

wherein n, s, t, R 1 , R 2 , R 4 , R 5 and R 6 are as defined in claim 1 ;

X 1 is N or C;

each X 2 , X 3 , X 4 and X 5 is independently selected from S, O, CR 10 and NR 11 ;

wherein each R 10 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

wherein each C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl and 4-10 membered heterocyclyl is optionally substituted with one to four R 201 ;

wherein each R 11 is independently selected from absent, hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

or one R 10 and one R 11 group, together with the atoms to which they are attached form a five, six or seven membered fused, or bridged ring;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

3. The compound of claim 1 , wherein R 3 is selected from:

wherein t is 1 or 2;

wherein each R 13 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

4. The compound of claim 1 having the structure of formula IB:

wherein each R 13 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

5. The compound of claim 1 having the structure of formula IC:

wherein each R 13 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

6. The compound of claim 2 having the structure of formula ID:

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

7. The compound of claim 1 having the structure of formula IE:

wherein each R 13 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

8. The compound of claim 3 having the structure of formula IF:

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

9. The compound of claim 2 having the structure of formula IG:

or a pharmaceutically acceptable salt thereof; wherein the atropisomer of formula IE or a pharmaceutically acceptable salt thereof, is present in excess of its corresponding enantiomer or a pharmaceutically acceptable salt thereof.

10. The compound of claim 3 having the structure of formula IH:

wherein each R 13 is independently selected from hydrogen, halo, cyano, hydroxy, amino, —C(O)R a , —C(O)OR b , —C(O)NR a R b , —N(R a )C(O)R b , —S(O)NR a R b , —S(O) 2 NR a R b , —S(O)R g , —S(O) 2 R g , —NR a R b , —OR a , —SR b , C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 3-8 cycloalkyl, C 6-10 aryl, 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, and 4-10 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

11. The compound of claim 3 having the structure of formula IJ:

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

12. The compound of claim 1 , wherein R 4 is selected from the group consisting of:

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

13. The compound of claim 1 , wherein R 1 is selected from hydrogen, fluoro, chloro, bromo, iodo, methyl, ethyl, propyl, butyl, fluoromethyl, difluoromethyl, trifluoromethyl, fluoroethyl, difluoroethyl and trifluoroethyl; or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

14. The compound of claim 1 , wherein R 2 is C 1-6 alkyl, C 3-8 cycloalkyl, 5-6 membered heteroaryl containing 1 to 3 heteroatoms selected from the group consisting of N, O, and S, and 4-6 membered heterocyclyl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S; wherein each C 1-6 alkyl, C 3-8 cycloalkyl, 5-6 membered heteroaryl and 4-6 membered heterocyclyl is optionally substituted with one to four R 101 ;

or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

15. The compound of claim 1 , wherein R 3 is selected from 5-10 membered heteroaryl containing 1 to 4 heteroatoms selected from the group consisting of N, O, and S, —C(O)OH, and —C(O)NH 2 ; or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

16. The compound of claim 1 , wherein R 5 is selected from hydrogen, methyl, ethyl, trifluoromethyl, carboxamide, cyano, piperazinyl, cyclopropyl, phenyl and triazolyl; or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

17. The compound of claim 1 , wherein the compound is selected from:

Example

Structure

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or a pharmaceutically acceptable salt, isomer, or a mixture thereof.

18. A pharmaceutical composition comprising the compound according to claim 1 , or a pharmaceutically acceptable salt, isomer, or a mixture thereof, and at least one pharmaceutically acceptable vehicle.

19. A tablet comprising the compound of claim 1 , or a pharmaceutically acceptable salt, isomer, or a mixture thereof, and a pharmaceutically acceptable carrier.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 6, 2017
From: CHANDRASEKHAR, JAYARAMAN; PATEL, LEENA; PERREAULT, STEPHANE; PHILLIPS, GARY; TILL, NICHOLAS ALEXANDER; TREIBERG, JENNIFER ANNE
To: GILEAD SCIENCES, INC.
Reel/Frame 043806/0344 →
Continuity (2)
Provisional Application 62398789 · Sep 23, 2016
Related Publication 20180086768A1 · Mar 29, 2018
Cited By (3)
US 12,590,298 US 12,612,385 US 12,628,858