IP Library Granted Patent US 10,457,692
Granted Patent B2
US 10,457,692 · App. 16/195,983 · Granted Oct 29, 2019

Pyrimido-diazepinone compounds and methods of treating disorders

Inventors: Nathanael S. Gray (Boston, MA); David Waller (Somerville, MA); Hwan Guen Choi (Seoul, KR); Jinhua Wang (Boston, MA); Xianming Deng (Brookline, MA)
Assignee: DANA-FARBER CANCER INSTITUTE, INC.
C07D513/04C07D471/18C07D487/04C07D487/12C07D487/14C07D487/16C07D487/18C07D495/14C07D498/04C07D498/18C07F5/022
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 10,457,692
App. No.
16/195,983
Granted
Oct 29, 2019
Kind
B2
Abstract

The present invention relates to novel pyrimido-diazepinone compounds, methods of modulating protein kinases, including MPS1 (TTK), ERK5 (BMK1, MAPK7), LRKK2, EphA2, polo kinase 1, 2, 3, or 4, Ack1, Ack2, Abl, DCAMKL1, ABL1, Abl mutants, DCAMKL2, ARK5, BRK, MKNK2, FGFR4, TNK1, PLK1, ULK2, PLK4, PRKD1, PRKD2, PRKD3, ROS1, RPS6KA6, TAOK1, TAOK3, TNK2, Bcr-Abl, GAK, cSrc, TPR-Met, Tie2, MET, FGFR3, Aurora, Axl, Bmx, BTK, c-kit, CHK2, Flt3, MST2, p70S6K, PDGFR, PKB, PKC, Raf, ROCK-H, Rsk1, SGK, TrkA, TrkB and TrkC, and the use of such compounds in the treatment of various diseases, disorders or conditions.

Claims (45)

1. A compound of formula I:

or a pharmaceutically acceptable salt thereof, wherein,

A is a single bond or double bond;

R′ is H or alkyl;

L is absent, S, SO, SO 2 , or CO;

X is hydrogen;

R 1 is alkyl or alkenyl, each of which may be interrupted by 1 N atom, wherein R 1 may be optionally substituted; or R 1 is aryl, arylalkyl, heteroaryl, or carbocyclic, wherein R 1 may be optionally substituted;

R 2 is hydrogen, optionally substituted alkyl, or optionally substituted cycloalkyl; and

R 6 is hydrogen or optionally substituted alkyl.

2. The compound of claim 1 , wherein R 1 is phenyl or pyridyl, each of which may be optionally substituted

3. The compound of claim 1 ,

wherein R 2 is H, methyl, or ethyl;

wherein R 6 is H;

wherein X is H;

wherein R′ is H;

wherein L is absent; and

wherein A is a single bond.

4. The compound of claim 1 , wherein the compound is

5. A compound of formula V:

or a pharmaceutically acceptable salt thereof,

wherein,

X is hydrogen;

R′ is hydrogen;

R 2 is hydrogen or optionally substituted alkyl;

R 3 is —OH or O-(optionally substituted alkyl);

R 4 is hydrogen or optionally substituted alkyl; and

R 6 is hydrogen or optionally substituted alkyl;

wherein optional substituents are selected from the group consisting of:

—F, —Cl, —Br, —I,

—OH, protected hydroxy,

—NO 2 , —CN,

—NH 2 , protected amino, —NH—C 1 -C 12 -alkyl, —NH—C 2 -C 12 -alkenyl, —NH—C 2 -C 12 -alkenyl, —NH—C 3 -C 12 -cycloalkyl, —NH-aryl, —NH-heteroaryl, —NH-heterocycloalkyl, -dialkylamino, -diarylamino, -diheteroarylamino, —O-C 1 -C 12 -alkyl, -O-C 2 -C 12 -alkenyl, -O-C 2 -C 12 -alkenyl, -O-C 3 -C 12 -cycloalkyl, —O-aryl, —O-heteroaryl, -O-heterocycloalkyl,

—C(O)—C 1 -C 12 -alkyl, —C(O)—C 2 -C 12 -alkenyl, —C(O)—C 2 -C 12 -alkenyl, —C(O)—C 3 -C 12 -cycloalkyl, —C(O)-aryl, —C(O)-heteroaryl, —C(O)-heterocycloalkyl, —CONH 2 , —CONH—C 1 -C 12 -alkyl, —CONH—C 2 -C 12 -alkenyl, —CONH—C 2 -C 12 -alkenyl, —CONH—C 3 -C 12 -cycloalkyl, —CONH-aryl, —CONH-heteroaryl, —CONH-heterocycloalkyl, —OCO 2 —C 1 -C 12 -alkyl, —OCO 2 —C 2 -C 12 -alkenyl, —OCO 2 —C 2 -C 12 -alkenyl, —OCO 2 -C 3 -C 12 -cycloalkyl, —OCO 2 -aryl, —OCO 2 -heteroaryl, —OCO 2 -heterocycloalkyl, —OCONH 2 , —OCONH—C 1 -C 12 -alkyl, —OCONH—C 2 -C 12 -alkenyl, —OCONH—C 2 -C 12 -alkenyl, —OCONH—C 3 -C 12 -cycloalkyl, —OCONH-aryl, —OCONH— heteroaryl, —OCONH— heterocycloalkyl, —NHC(O)—C 1 -C 12 -alkyl, —NHC(O)—C 2 -C 12 -alkenyl, —NHC(O)—C 2 -C 12 -alkenyl, —NHC(O)—C 3 -C 12 -cycloalkyl, —NHC(O)-aryl, —NHC(O)-heteroaryl, —NHC(O)-heterocycloalkyl, —NHCO 2 —C 1 -C 12 -alkyl, —NHCO 2 —C 2 -C 12 -alkenyl, —NHCO 2 —C 2 -C 12 -alkenyl, —NHCO 2 —C 3 -C 12 -cycloalkyl, —NHCO 2 -aryl, —NHCO 2 -heteroaryl, —NHCO 2 -heterocycloalkyl, —NHC(O)NH 2 , —NHC(O)NH—C 1 -C 12 -alkyl, —NHC(O)NH—C 2 -C 12 -alkenyl, —NHC(O)NH—C 2 -C 12 -alkenyl, —NHC(O)NH—C 3 -C 12 -cycloalkyl, —NHC(O)NH-aryl, —NHC(O)NH-heteroaryl, —NHC(O)NH-heterocycloalkyl, NHC(S)NH 2 , —NHC(S)NH—C 1 -C 12 -alkyl, —NHC(S)NH—C 2 -C 12 -alkenyl, —NHC(S)NH—C 2 -C 12 -alkenyl, —NHC(S)NH—C 3 -C 12 -cycloalkyl, —NHC(S)NH-aryl, —NHC(S)NH-heteroaryl, —NHC(S)NH-heterocycloalkyl, —NHC(NH)NH 2 , —NHC(NH)NH—C 1 -C 12 -alkyl, —NHC(NH)NH—C 2 -C 12 -alkenyl, —NHC(NH)NH—C 2 -C 12 -alkenyl, —NHC(NH)NH—C 3 -C 12 -cycloalkyl, —NHC(NH)NH-aryl, —NHC(NH)NH-heteroaryl, —NHC(NH)NH-heterocycloalkyl, —NHC(NH)—C 1 -C 12 -alkyl, —NHC(NH)—C 2 -C 12 -alkenyl, —NHC(NH)—C 2 -C 12 -alkenyl, —NHC(NH)—C 3 -C 12 -cycloalkyl, —NHC(NH)-aryl, —NHC(NH)-heteroaryl, —NHC(NH)-heterocycloalkyl, —C(NH)NH—C 1 -C 12 -alkyl, —C(NH)NH—C 2 -C 12 -alkenyl, —C(NH)NH—C 2 -C 12 -alkenyl, -C(NH)NH—C 3 -C 12 -cycloalkyl, —C(NH)NH-aryl, —C(NH)NH-heteroaryl, —C(NH)NH— heterocycloalkyl, —S(O)—C 1 -C 12 -alkyl, —S(O)—C 2 -C 12 -alkenyl, —S(O)—C 2 -C 12 -alkenyl, —S(O)—C 3 -C 12 -cycloalkyl, —S(O)-aryl, —S(O)-heteroaryl, —S(O)-heterocycloalkyl-SO 2 NH 2 , -SO 2 NH—C 1 -C 12 -alkyl, -SO 2 NH—C 2 -C 12 -alkenyl, -SO 2 NH—C 2 -C 12 -alkenyl, -SO 2 NH—C 3 -C 12 -cycloalkyl, -SO 2 NH-aryl, -SO 2 NH-heteroaryl, -SO 2 NH-heterocycloalkyl, —NHSO 2 -C 1 -C 12 -alkyl, —NHSO 2 -C 2 -C 12 -alkenyl, —NHSO 2 -C 2 -C 12 -alkenyl, —NHSO 2 -C 3 -C 12 -cycloalkyl, —NHSO 2 -aryl, —NHSO 2 -heteroaryl, —NHSO 2 -heterocycloalkyl, -CH 2 NH 2 , -CH 2 SO 2 CH 3 , -aryl, -arylalkyl, -heteroaryl, -heteroarylalkyl, -heterocycloalkyl, —C 3 -C 12 -cycloalkyl, polyalkoxyalkyl, polyalkoxy, -methoxymethoxy, -methoxyethoxy, -SH, -S-C 1 -C 12 -alkyl, -S-C 2 -C 12 -alkenyl, -S-C 2 -C 12 -alkenyl, -S-C 3 -C 12 -cycloalkyl, —S-aryl, —S-heteroaryl, —S-heterocycloalkyl, and methylthiomethyl.

6. The compound of claim 5 ,

wherein R 2 is H, methyl, or ethyl;

wherein R 6 is H;

wherein R 3 is —OCH 3 or —OCH 2 CH 3 ; and

wherein R 4 is methyl or ethyl.

7. The compound of claim 6 , wherein R 2 is methyl, R 6 is hydrogen, R 1 is hydrogen, R 3 is OCH 3 and R 4 is methyl.

8. The compound of claim 6 , wherein R 2 is methyl, R 6 is hydrogen, R 1 is hydrogen, R 3 is —OCH 2 CH 3 and R 4 is methyl.

9. A pharmaceutical composition comprising a compound of claim 1 or a pharmaceutically acceptable salt thereof, together with a pharmaceutically acceptable carrier.

10. A pharmaceutical composition comprising a compound of claim 5 or a pharmaceutically acceptable salt thereof, together with a pharmaceutically acceptable carrier.

11. The compound of claim 2 , wherein R 1 is substituted with 0-4 substituents, selected from N(R A )(R A ), C(O)NH(R A ), alkoxy, alkylhalo,

each of which may be further substituted, wherein each R A is independently alkyl.

12. The compound of claim 11 , wherein R 1 is substituted with 0-4 substituents, selected from OMe, OEt, CF 3 ,

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 21, 2018
From: GRAY, NATHANAEL S.; WALLER, DAVID; CHOI, HWAN GUEN; WANG, JINHUA; DENG, XIANMING
To: DANA-FARBER CANCER INSTITUTE, INC.
Reel/Frame 047559/0715 →
Continuity (4)
Continuation 15581702 · Apr 28, 2017
Division 14775897
Provisional Application 61802075 · Mar 15, 2013
Related Publication 20190084998A1 · Mar 21, 2019