IP Library › Granted Patent US 10,494,371
Granted Patent B2
US 10,494,371 · App. 15/870,557 · Granted Dec 3, 2019

Bromodomain inhibitors

Inventors: Michael John Bennett (San Diego, CA); Juan Manuel Betancort (San Diego, CA); Amogh Boloor (San Diego, CA); Stephen W. Kaldor (San Diego, CA); Jeffrey Alan Stafford (San Diego, CA); James Marvin Veal (Apex, NC)
Assignee: CELGENE QUANTICEL RESEARCH, INC.
C07D473/34C07D401/04C07D401/14C07D405/04C07D413/04C07D413/14C07D417/04C07D471/04C07D471/06C07D491/04C07D498/04
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Quick Facts
Patent No.
US 10,494,371
App. No.
15/870,557
Granted
Dec 3, 2019
Kind
B2
Abstract

The present invention relates to substituted heterocyclic derivative compounds, compositions comprising said compounds, and the use of said compounds and compositions for epigenetic regulation by inhibition of bromodomain-mediated recognition of acetyl lysine regions of proteins, such as histones. Said compositions and methods are useful for the treatment of cancer and neoplastic disease.

Claims (92)

1. A compound of Formula I, or a pharmaceutically acceptable salt thereof,

wherein,

X 2 is C—R 12 , in which R 12 is hydrogen, halogen, alkyl, or alkoxy;

X 5 is C—R 15 , in which R 15 is hydrogen, halogen, —CN, alkyl or alkoxy;

X 6 is C—R 16 , in which R 16 is hydrogen, halogen, or —W-X, wherein W is a bond, —O—, —S—, or —NH—, and X is alkyl, alkynyl, aryl, aralkyl, cycloalkyl, cycloalkylalkyl, cycloalkylalkynyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl;

Ring A is selected from the group consisting of:

wherein:

R 1 is hydrogen, alkyl, alkylsulfonyl, alkylsulfinyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl;

R 2 is alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

each R 3 is independently hydrogen, halogen, alkyl, alkoxy, alkoxyalkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

G is:

2. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein G is:

3. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein G is:

4. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein G is:

5. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein ring A is selected to provide one of:

6. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein ring A is selected to provide one of:

7. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein:

R 16 is hydrogen or —W—X, wherein W is —O—, —S— or —NH— and X is alkyl, alkynyl, aryl, aralkyl, cycloalkyl, cycloalkylalkyl, cycloalkylalkynyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl;

R 1 is hydrogen, alkyl, alkylsulfonyl, alkylsulfinyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

R 2 is alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl.

8. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein:

R 16 is —W—X, wherein W is —O— and X is alkyl aryl, cycloalkyl, or cycloalkylalkyl;

R 1 is hydrogen or alkyl; and

R 2 is alkyl.

9. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein R 16 is:

10. The compound of claim 1 , or a pharmaceutically acceptable salt thereof, wherein R 16 is:

11. A compound selected from one of the following:

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(3-fluorophenyl)methyl]-2-methylbenzimidazol-4-yl]ethanesulfonamide;

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(4-fluorophenyl)methyl]indazol-4-yl]ethanesulfonamide;

N-[2-cyclopropyl-7-(2-methyl-1-oxoisoquinolin-4-yl)-1,3-benzoxazol-5-yl]ethanesulfonamide;

4-[5-(cyclopropylmethoxy)-2-ethyl-1,1-dioxo-3H-1,2-benzothiazol-6-yl]-2-methylisoquinolin-1-one;

4-[5-(cyclopropylmethoxy)-1-methylsulfonyl-2,3-dihydroindol-6-yl]-2-methylisoquinolin-1-one;

4-[5-(cyclopropylmethoxy)-1-ethylsulfonyl-2,3-dihydroindol-6-yl]-2-methylisoquinolin-1-one;

N-[1-benzyl-6-(2-methyl-1-oxoisoquinolin-4-yl)indol-4-yl]methanesulfonamide;

N-[1-benzyl-6-(1,5-dimethyl-6-oxopyridin-3-yl)indol-4-yl]methanesulfonamide;

N-[1-benzyl-6-(1,5-dimethyl-6-oxopyridin-3-yl)-2,3-dihydroindol-4-yl]methanesulfonamide;

N-[1-benzyl-6-(2-methyl-1-oxoisoquinolin-4-yl)-2,3-dihydroindol-4-yl]methanesulfonamide;

N-[1-benzyl-6-(1,5-dimethyl-6-oxopyridin-3-yl)benzotriazol-4-yl]ethanesulfonamide N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(4-fluorophenyl)methyl]benzotriazol-4-yl]ethanesulfonamide;

4-[6-(cyclopropylmethoxy)-1-methyl-3-methyl sulfonylindazol-5-yl]-2-methylisoquinolin-1-one;

4-[6-(cyclopropylmethoxy)-3-ethyl sulfonyl-1 methylindazol-5-yl]-2-methylisoquinolin-1-one;

N-[1-benzyl-6-(1,5-dimethyl-6-oxopyridin-3-yl)benzimidazol-4-yl]methanesulfonamide

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(3-fluorophenyl)methyl]benzimidazol-4-yl]methanesulfonamide;

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(3-fluorophenyl)methyl]benzimidazol-4-yl]ethanesulfonamide;

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(3-fluorophenyl)methyl]-2-methylbenzimidazol-4-yl]methanesulfonamide;

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-1-[(4-fluorophenyl)methyl]-2-methylbenzimidazol-4-yl]methanesulfonamide;

N-[1-[(2,4-difluorophenyl)methyl]-6-(1,5-dimethyl-6-oxopyridin-3-yl)benzimidazol-4-yl]ethanesulfonamide;

N-[1-benzyl-6-(1,5-dimethyl-6-oxopyridin-3-yl)indazol-4-yl]ethanesulfonamide;

N-[6-(1,5-dimethyl-6-oxopyridin-3-yl)-2-methyl-1-(1-phenylethyl)benzimidazol-4-yl]methanesulfonamide;

4-[7-(cyclopropylmethoxy)-4-ethylsulfonyl-2,3-dihydro-1,4-benzoxazin-6-yl]-2-methylisoquinolin-1-one;

N-[1-(cyclopropylmethyl)-6-(1,5-dimethyl-6-oxopyridin-3-yl)-2-ethoxybenzimidazol-4-yl]methanesulfonamide;

N-[1-(cyclopropylmethyl)-6-(1,5-dimethyl-6-oxopyridin-3-yl)-2-methoxybenzimidazol-4-yl]methanesulfonamide;

N-[1-(cyclopropylmethyl)-6-(1,5-dimethyl-6-oxopyridin-3-yl)-2-(trifluoromethyl)benzimidazol-4-yl]methanesulfonamide;

or a pharmaceutical salt of any of these compounds.

12. A pharmaceutical composition comprising the compound of claim 1 or 11 .

13. An oral dosage form comprising the pharmaceutical composition of claim 12 .

14. A medicament comprising the pharmaceutical composition of claim 12 for use in the treatment of cancer or other neoplastic disease.

15. A method of modulating the epigenetic status of a cell comprising contacting the cell with the compound of claim 1 .

16. A method for inhibiting the activity of a bromodomain-containing protein in a biological sample comprising contacting the biological sample with the compound of claim 1 .

17. A method for treating cancer or neoplastic disease in a subject in need of such treatment comprising administering to the subject a therapeutically effective amount of a compound of claim 1 .

18. A compound of Formula II, or a pharmaceutically acceptable salt thereof,

wherein,

X 2 is C—R 12 , wherein R 12 is hydrogen, halogen, alkyl, or alkoxy;

X 3 is C—R 13 , wherein R 13 is —Y—Z, in which

Y is a bond, —CH 2 —, or —CH(C 1 -C 4 alkyl)-;

Z is —SO 2 R b , —N(R a )SO 2 R b , —SO 2 N(R a ) 2 , —N(R a )SO 2 N(R a ) 2 , —CON(R a ) 2 , —N(R a )CO 2 R a , —N(R a )CON(R a ) 2 , —N(R a )COR a , —OC(O)N(R a ) 2 , —OSO 2 N(R a ) 2 , or —N(R a )SO 3 R b ;

each R a is independently selected from hydrogen, alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

R b is selected from alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl;

X 6 is C—R 16 , wherein R 16 is hydrogen, halogen, or —W—X, wherein W is a bond, —O—, —S—, or —NH—, and X is alkyl, alkynyl, aryl, aralkyl, cycloalkyl, cycloalkylalkyl, cycloalkylalkynyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl;

Ring B is selected to provide one of:

and wherein:

R 1 is hydrogen, alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

each R 3 is independently hydrogen, halogen, alkyl, alkylsulfonyl, alkylsulfinyl, alkoxy, alkoxyalkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

G is:

19. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein G is:

20. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein G is:

21. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein G is:

22. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein ring B is selected to provide one of the following:

23. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein ring B is selected to provide one of the following:

24. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein:

R 13 is —Y—Z, in which Y is a bond or —CH 2 —, Z is —SO 2 R b , —N(R a )SO 2 R b , or —SO 2 N(R a ) 2 , each R a is independently hydrogen, alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl, and R b is alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl;

R 1 is hydrogen, alkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl; and

R 3 is hydrogen, halogen, alkyl, alkylsulfonyl, alkylsulfinyl, alkoxy, alkoxyalkyl, cycloalkyl, cycloalkylalkyl, aryl, aralkyl, heterocyclyl, heterocyclylalkyl, heteroaryl, or heteroarylalkyl.

25. The compound of claim 18 , or a pharmaceutically acceptable salt thereof, wherein:

R 13 is —Y—Z, in which Y is a bond or —CH 2 —, Z is —SO 2 R b or —N(R a )SO 2 R b , each R a is independently hydrogen or alkyl, and R b is alkyl;

R 1 is alkyl, cycloalkylalkyl, or aralkyl; and

R 3 is hydrogen, halogen, alkyl, or alkoxy.

26. A pharmaceutical composition comprising the compound of claim 18 .

27. An oral dosage form comprising the pharmaceutical composition of claim 26 .

28. A medicament comprising the pharmaceutical composition of claim 26 for use in the treatment of cancer or other neoplastic disease.

29. A method of modulating the epigenetic status of a cell comprising contacting the cell with the compound of claim 18 .

30. A method for inhibiting the activity of a bromodomain-containing protein in a biological sample comprising contacting the biological sample with the compound of claim 18 .

31. A method for treating cancer or neoplastic disease in a subject in need of such treatment comprising administering to the subject a therapeutically effective amount of a compound of claim 18 .

Continuity (3)
Division 15130503 · Apr 15, 2016
Provisional Application 62148098 · Apr 15, 2015
Related Publication 20180134710A1 · May 17, 2018