Information processing apparatus, information processing method, and information processing system
According to some aspects, a system that includes a flow cytometer and circuitry is provided. The flow cytometer is configured to generate data indicative of a pulse waveform corresponding to a fluorescence signal of a biological sample. The circuitry is configured to determine peak position information of the pulse waveform by identifying at least one peak of the pulse waveform and determine at least one biological characteristic of the biological sample based on the peak position information.
1. A system comprising:
a flow cytometer configured to generate data indicative of a pulse waveform corresponding to a fluorescence signal of a biological sample;
circuitry configured to:
determine peak position information of the pulse waveform by identifying at least one peak of the pulse waveform; and
determine at least one biological characteristic of the biological sample based on the peak position information.
2. The system of claim 1 , wherein determining the at least one biological characteristic includes comparing the peak position information to data relating pulse waveform information to different biological characteristics.
3. The system of claim 1 , wherein determining at least one biological characteristic includes identifying a location of at least one biological component within the biological sample.
4. The system of claim 3 , wherein the at least one biological component includes an antigen.
5. The system of claim 1 , wherein determining peak position information includes identifying a number of peaks, and determining at least one biological characteristic includes determining a number of locations of the at least one biological component within the biological sample based on the number of peaks.
6. The system of claim 1 , wherein determining peak position information includes:
determining a first time associated with a first peak of the pulse waveform and a second time associated with a second peak of the pulse waveform; and
determining a time difference between the first time associated with the first peak and the second time associated with the second peak.
7. The system of claim 6 , wherein determining at least one biological characteristic includes determining a distance between a first location of at least one biological component and a second location of the at least one biological component within the biological sample based on the time difference between the first time and the second time.
8. The system of claim 1 , wherein determining peak position information includes determining a peak area for the at least one peak of the pulse waveform.
9. The system of claim 8 , wherein determining at least one biological characteristic includes determining an amount of at least one biological component based on the peak area.
10. The system of claim 1 , wherein determining peak position information includes determining a maximum peak value for the at least one peak of the pulse waveform.
11. The system of claim 10 , wherein determining at least one biological characteristic includes determining an indication of a degree of localization of at least one biological component based on the maximum peak value.
12. The system of claim 1 , wherein the circuitry is further configured to generate an instruction to sort the biological sample based on the peak position information and transmit the instruction to the flow cytometer, wherein the flow cytometer sorts the biological sample in response to receiving the instruction.
13. The system of claim 1 , wherein the circuitry is further configured to generate an instruction to sort the biological sample based on the at least one biological characteristic and transmit the instruction to the flow cytometer, wherein the flow cytometer sorts the biological sample in response to receiving the instruction.
14. The system of claim 1 , wherein determining peak position information includes determining peak position information of the pulse waveform by comparing the pulse waveform to at least one shape model.
15. The system of claim 14 , wherein determining the peak position information of the pulse waveform includes selecting a shape model from among the at least one shape model by calculating a level by which the shape model fits the pulse waveform and calculating a regression curve of the pulse waveform and/or at least one parameter of the pulse waveform based on comparing the pulse waveform to the selected shape model.
16. The system of claim 1 , wherein the pulse waveform includes a plurality of peaks and the peak position information includes information for each of the plurality of peaks.
17. The system of claim 16 , wherein determining peak position information includes comparing a first intensity corresponding to a first peak of the plurality of peaks and a second intensity corresponding to a second peak of the plurality of peaks.
18. The system of claim 17 , wherein determining peak position information includes determining a time difference between a first peak of the plurality of peaks and a second peak of the plurality of peaks.
19. The system of claim 1 , wherein the data includes a first pulse waveform and a second pulse waveform, the first pulse waveform corresponds to data generated with a first wavelength range and the second pulse waveform corresponds to data generated with a second wavelength range, and wherein determining peak position information includes determining peak position information by comparing the first pulse waveform and the second pulse waveform.
20. The system of claim 19 , wherein determining peak position information includes identifying a peak in the second pulse waveform and identifying a peak in the first pulse waveform based on peak information for the peak in the second pulse waveform.
21. The system of claim 19 , wherein the first pulse waveform is indicative of data corresponding to a first fluorophore that specifically labels a part of the biological sample and the second waveform is indicative of data corresponding to a second fluorophore that nonspecifically labels the biological sample.
22. The system of claim 1 , wherein the circuitry is further configured to determine a base line for the pulse waveform and determining peak position information includes subtracting the base line from the pulse waveform.
23. The system of claim 22 , wherein acquiring a baseline for the pulse waveform includes applying a digital filter to the pulse waveform.
24. The system of claim 1 , wherein the biological sample is a cell, microorganism or a biological polymer.
25. A flow cytometer information processing method comprising:
determining peak position information of a pulse waveform corresponding to a fluorescence signal of a biological sample by identifying at least one peak of the pulse waveform; and
determining at least one biological characteristic of the biological sample based on the peak position information.
26. At least one non-transitory computer-readable storage medium storing computer-executable instructions that, when executed, perform a flow cytometer information processing method comprising:
determining peak position information of a pulse waveform corresponding to a fluorescence signal of a biological sample by identifying at least one peak of the pulse waveform; and
determining at least one biological characteristic of the biological sample based on the peak position information.