White matter fibrography by synthetic magnetic resonance imaging
Methods of characterizing the brain of a subject, comprising: (a) performing a multispectral multislice magnetic resonance scan on the brain of a subject, (b) storing image data indicative of a plurality of magnetic resonance weightings of each of a plurality of slices of the brain of the subject to provide directly acquired images, (c) processing the directly acquired images to generate a plurality of quantitative maps of the brain indicative of a plurality of qMRI parameters of the subject, (d) constructing a plurality of magnetic resonance images indicative of white matter structure from the quantitative maps, and (e) generating a spatial entropy map of the brain of the subject from the plurality of magnetic resonance images; and/or generating a myelin water map of the brain of the subject from the plurality of magnetic resonance images.
1. A method of characterizing the brain of a subject, comprising:
(a) performing a multispectral multislice magnetic resonance scan on the brain of a subject,
(b) storing image data indicative of a plurality of magnetic resonance weightings of each of a plurality of slices of the brain of the subject to provide directly acquired images,
(c) processing the directly acquired images to generate a plurality of quantitative maps of the brain indicative of a plurality of qMRI parameters of the subject,
(d) constructing a plurality of magnetic resonance images indicative of white matter structure from the quantitative maps, and
(e) generating a spatial entropy map of the brain of the subject from the plurality of magnetic resonance images; and/or generating a myelin water map of the brain of the subject from the plurality of magnetic resonance images.
2. The method of claim 1 , wherein in e) only a spatial entropy map is generated.
3. The method of claim 1 , wherein in e) only a myelin water map is generated.
4. The method of claim 1 , wherein in e) both a spatial entropy map and a myelin water map are generated.
5. The method of claim 1 , wherein in e) the spatial entropy map is generated using an integer disk radius of from 3 to 5 pixels.
6. The method of claim 5 , wherein in e) the spatial entropy map is generated using a disk radius of 4.
7. The method of claim 1 , wherein in e) the spatial entropy map is generated using disk radius of from 3.5 to 4.5.
8. The method of claim 1 , wherein the multispectral multislice magnetic resonance scan of (a) comprises performing a 2D scan.
9. The method of claim 1 , wherein the multispectral multislice magnetic resonance scan of (a) comprises performing a 3D scan.
10. The method of claim 1 , wherein (b) comprises storing the directly acquired images.
11. The method of claim 1 , wherein (d) comprises performing a synthetic MRI scan.
12. The method of claim 1 , wherein the myelin water mapping in (e) comprises thresholding R1-weighted synthetic images to isolate large signal pixels, which correlate with short T1 components of the white matter.
13. The method of claim 1 , wherein the myelin water mapping in (e) comprises performing thresholding, binarization, and masking of a PD map to reveal the skeleton of the axon fiber network corresponding to the water trapping within the myelin sheath.
14. The method of claim 1 , wherein (e) comprises performing an algorithm selected from the group consisting of calculating anatomically localized spatial entropy measures, global spatial entropy measures, anatomically localized myelin water measures, and/or global myelin water measures.
15. A method of claim 1 , further comprising determining the total spatial entropy content of the brain of the subject.
16. The method of claim 15 , further comprising comparing the total entropy of the brain of the subject to a total entropy standard of a defined subject parameter.
17. The method of claim 16 , wherein the defined subject parameter is one or a combination of any two or more of age, gender, ethnicity, cognition status, state of physical health, and state of mental health.
18. The method of claim 17 , wherein the total entropy measured for the subject is higher than the total entropy standard for the defined subject parameter and the subject is determined to have a condition correlated to the parameter.
19. The method of claim 17 , wherein the total entropy measured for the subject is lower than the total entropy standard for the defined subject parameter and the subject is determined to not have a condition correlated to the parameter.