Process for making arylomycin ring analogs
Methods for making an arylomycin ring of formula t or salts or solvates thereof, wherein R, R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , R 7 , R 8 , R 9 , R 5 , R 10 and Pg 1 are as defined herein.
1. A method of making an arylomycin ring of formula o:
or a salt or solvate thereof,
wherein:
R is: hydrogen; or C 1-4 alkyl;
R 1 , R 2 , R 3 , R 4 , R 5 and R 6 each independently is: hydrogen; C 1-4 alkyl; halo-C 1-4 alkyl; halo; amino; amino-C 1-4 alkyl; hydroxy; hydroxy-C 1-6 alkyl; cyano; cyano-C 1-6 alkyl; or nitro, wherein the amino and hydroxyl moieties may each optionally include a protecting group;
R 7 is: hydrogen; or C 1-4 alkyl;
R 8 is: hydrogen; C 1-4 alkyl; halo-C 1-4 alkyl; halo; amino; amino-C 1-4 alkyl; hydroxy; hydroxy-C 1-6 alkyl; cyano; or cyano-C 1-6 alkyl, wherein the amino and hydroxyl moieties may each optionally include a protecting group;
Pg 1 is an optional amine protecting group; and
Pg 2 is an optional hydroxyl protecting group;
the method comprising:
reacting a phenyl boronate compound of formula l:
or a salt or solvate thereof,
wherein:
R a is: hydrogen; or C 1-4 alkyl; and may be the same or different on each occurrence, or two R a groups may form a C 2-6 alkylene that, together with the atoms to which they are attached, may form a five- or six-membered ring; and
R, R 4 , R 5 , R 6 , R 7 , R 8 , Pg 1 and Pg 2 are as defined in the arylomycin ring of formula o;
with a phenyl halide compound of formula e:
or a salt or solvate thereof,
wherein:
Y is halogen; and
R 1 , R 2 , R 3 , and Pg 1 are as defined in the arylomycin ring of formula o;
in the presence of chloro(crotyl)(tri-tert-butylphosphine)palladium(II), and after said reacting removing one amine protecting group Pg 1 , to form a compound of formula y:
or a salt or solvate thereof,
wherein:
R, R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , R 7 , R 8 , Pg 1 , and Pg 2 are as defined in the arylomycin ring of formula o; and
cyclizing the compound of formula y, or a salt or solvate thereof, by forming an amide bond to make the arylomycin ring of formula o, or a salt or solvate thereof.
2. The method of claim 1 , further comprising reacting a compound of formula k:
or a salt or solvate thereof,
wherein:
Y, R, R 4 , R 5 , R 6 , R 7 , R 8 , Pg 1 , and Pg 2 are as defined in claim 1 ;
with a boronating agent to form the compound of formula l, or a salt or solvate thereof.
3. The method of claim 2 , further comprising:
reacting a compound of formula h:
or a salt or solvate thereof,
wherein:
Y, R, R 4 , R 5 , R 6 , and R 7 are as defined in claim 1 ;
with an amino acid of formula i:
or a salt or solvate thereof,
wherein:
R 8 and Pg 1 are as defined in claim 1 ;
to form a compound of formula j:
or a salt or solvate thereof,
wherein:
Y, R, R 4 , R 5 , R 6 , R 7 , R 8 , and Pg 1 are as defined in claim 1 ; and
introducing a hydroxyl protecting group Pg 2 to the compound of formula j, or a salt or solvate thereof, to form the compound of formula k, or a salt or solvate thereof.
4. The method of claim 3 , further comprising:
esterifying a compound of formula g:
or a salt or solvate thereof,
wherein:
Y, R 4 , R 5 , R 6 , and R 7 are as defined in claim 1 ;
to form the compound of formula h, or a salt or solvate thereof.
5. The method of claim 4 , further comprising:
halogenating a compound of formula f:
or a salt or solvate thereof,
wherein:
R 4 , R 5 , R 6 , and R 7 are as defined in claim 1 ;
to form the compound of formula g, or a salt or solvate thereof.
6. The method of claim 1 , further comprising:
reducing a compound of formula d:
or a salt or solvate thereof,
wherein:
Y, R 1 , R 2 , R 3 , and Pg 1 are as defined in claim 1 ;
to form the compound of formula e, or a salt or solvate thereof.
7. The method of claim 6 , further comprising:
reacting a compound of formula c:
or a salt or solvate thereof,
wherein:
Y, R 1 , R 2 , R 3 , and Pg 1 are as defined in claim 1 ;
with trioxane to form the compound of formula d, or a salt or solvate thereof.
8. The method of claim 7 , further comprising:
halogenating a compound of formula a:
or a salt or solvate thereof,
wherein:
R 1 , R 2 , and R 3 are as defined in claim 1 ;
to form a compound of formula b:
or a salt or solvate thereof,
wherein:
Y, R 1 , R 2 , and R 3 are as defined in claim 1 ; and
introducing an amine protecting group Pg 1 to the compound of formula b, or a salt or solvate thereof, to form the compound of formula c, or a salt or solvate thereof.