Mucus analysis for animal health assessments
The present teachings generally include techniques for characterizing the health of an animal (e.g., gastrointestinal health) using image analysis (e.g., of a sample of an exudate such as mucus) as a complement, alternative, or a replacement to traditional laboratory analyses of biological specimens. The present teachings may further include techniques for personalizing a health and wellness plan (including, but not limited to, a dietary supplement such as a customized formula based on a health assessment), where such a plan may be based on one or more of the health characterization techniques described herein. The present teachings may also or instead include techniques or plans for continuous care for an animal, e.g., by executing health characterization and heath planning techniques in a cyclical fashion. A personalized supplement system (e.g., using a personalized supplement, personalized dosing device, and personalized packaging) may also or instead be created using the present teachings.
1. A method of analyzing an image of a biological sample to provide a health assessment of an animal, the method comprising:
receiving an image of a biological sample containing mucus from a camera of a smartphone;
identifying and extracting one or more regions of interest within the image for further analysis;
applying a model to the one or more regions of interest to identify one or more conditions of mucus therein, the model trained using a plurality of images having varying conditions of mucus, wherein output of the model includes at least a grade corresponding to an amount of mucus present in the one or more regions of interest;
based at least in part on the output of the model, predicting a health characteristic of an animal from which the biological sample originated without laboratory analysis of the biological sample; and
presenting the health characteristic to a user associated with the animal.
2. The method of claim 1 , further comprising providing a treatment for the animal in view of the health characteristic.
3. The method of claim 2 , wherein the treatment includes a customized health plan for the animal.
4. The method of claim 3 , wherein the customized health plan includes one or more of a behavioral change and a dietary change.
5. The method of claim 3 , wherein the customized health plan includes a recommendation regarding one or more of diet, sleep, exercise, and an activity.
6. The method of claim 2 , wherein the treatment includes one or more of a food, a supplement, and a medicine.
7. The method of claim 2 , wherein the treatment includes a personalized dietary supplement for the animal.
8. The method of claim 7 , wherein the personalized dietary supplement includes a predetermined amount of one or more of a probiotic, a prebiotic, a digestive enzyme, an anti-inflammatory, a natural extract, a vitamin, a mineral, an amino acid, a short-chain fatty acid, an oil, and a formulating agent.
9. The method of claim 1 , further comprising providing a report for the animal that includes the health characteristic.
10. The method of claim 1 , wherein a descriptor is provided to the user accompanying the health characteristic.
11. The method of claim 1 , wherein an alert is provided to the user in view of the health characteristic.
12. The method of claim 1 , wherein the grade identifies the amount of mucus as one of absent, low, or high.
13. The method of claim 1 , wherein output of the model further includes one or more labels corresponding to at least one of: an opacity of mucus present in the one or more regions of interest, a thickness of mucus present in the one or more regions of interest, a surface area occupied by mucus in the one or more regions of interest, a color of mucus present in the one or more regions of interest, an estimate of microbial content of mucus present in the one or more regions of interest, an estimate of a level of one or more of bacteria and cortisol in the animal, and detection of one or more of blood and a pathogen.
14. The method of claim 1 , wherein the model is a convolutional neural network (CNN) model.
15. The method of claim 1 , wherein the biological sample includes a stool sample, the method further comprising calculating one or more of a geometric attribute, a texture attribute, and a color attribute within the one or more regions of interest to identify one or more features of the stool sample.
16. The method of claim 15 , further comprising applying a second model to the one or more features of the stool sample, the second model predicting a second health characteristic of the animal based on the one or more features.
17. The method of claim 16 , further comprising providing a treatment in view of a combination of the health characteristic and the second health characteristic.
18. The method of claim 1 , wherein the grade corresponding to the amount of mucus present in the one or more regions of interest is based at least in part on a percentage of coverage of mucus on the one or more regions of interest as deduced by the model.
19. A computer program product for analyzing an image of a biological sample to provide a health assessment of an animal, the computer program product comprising computer executable code embodied in a non-transitory computer readable medium that, when executing on one or more computing devices, performs the steps of:
receiving an image of a biological sample containing mucus from a camera of a smartphone;
identifying and extracting one or more regions of interest within the image for further analysis;
applying a model to the one or more regions of interest to identify one or more conditions of mucus therein, the model trained using a plurality of images having varying conditions of mucus, wherein output of the model includes at least a grade corresponding to an amount of mucus present in the one or more regions of interest;
based at least in part on the output of the model, predicting a health characteristic of an animal from which the biological sample originated without laboratory analysis of the biological sample; and
presenting the health characteristic to a user associated with the animal.
20. A system for analyzing an image of a biological sample to provide a health assessment of an animal, the system comprising:
a data network;
a smartphone coupled to the data network; and
a remote computing resource coupled to the data network and accessible to the smartphone through the data network, the remote computing resource including a processor and a memory, the memory storing code executable by the processor to perform the steps of:
receiving an image taken from a camera of the smartphone over the data network, the image including a biological sample containing mucus;
identifying and extracting one or more regions of interest within the image for further analysis;
applying a model to the one or more regions of interest to identify one or more conditions of mucus therein, the model trained using a plurality of images having varying conditions of mucus, wherein output of the model includes at least a grade corresponding to an amount of mucus present in the one or more regions of interest;
based at least in part on the output of the model, predicting a health characteristic of an animal from which the biological sample originated without laboratory analysis of the biological sample; and
presenting the health characteristic on the smartphone.