Non-peptidic cell-penetrating motifs
Disclosed are compounds that can penetrate the mitochondrial membrane and that are able to deliver cargo (e.g., therapeutic agents) specifically to the mitochondria.
1. A compound having a structure according to Formula III:
wherein:
A is a non-peptidic multivalent moiety, wherein A is selected from the group consisting of:
(a) a carbocyclyl;
(b) a heterocyclyl;
(c) an amino acid;
(d) an aryl;
(e) a heteroaryl;
(f) nitrogen;
(g) a non-peptidic moiety comprising aspartic acid, glutamic acid, or lysine, or combinations thereof;
(h) a carbohydrate;
(i) a sugar alcohol; and
(j) a polymeric alcohol;
each X is independently a first bonding group that links R 1 to A, wherein X is a divalent group;
each Y is a second bonding group that links A to a guanidine or guanidinium group; wherein
guanidine or guanidinium group refers to the structure
each Z is independently a lone pair, H, halogen, CN, NO 2 , NH 2 , or alkyl;
each R 1 is independently a hydrophobic amino acid residue, or analog thereof, having an aromatic side chain;
each R 2 is independently absent or a moiety comprising hydrophobic residue;
each R 3 is independently a cargo moiety;
each m is independently an integer from 0 to 10;
each n is independently an integer from 0 to 6;
each p is 1 to 3;
q is 2 to 7; and
s is an integer from 1 to 3.
2. The compound of claim 1 , wherein A is an aryl or heteroaryl.
3. The compound of claim 1 , wherein A is nitrogen.
4. The compound of claim 1 , wherein X comprises a bonding group selected from
wherein each a is independently number from 0 to 10.
5. The compound of claim 1 , wherein Y is selected from N, S,
wherein each b is independently a number from 0 to 10.
6. The compound of claim 1 , wherein R 2 is independently selected from the group consisting of:
(a) a moiety comprising an aryl or heteroaryl moiety and
(b) an amino acid residue or analog thereof, having an aromatic side chain.
7. The compound of claim 1 , wherein R 1 and R2, if present, is independently an amino acid selected from the group consisting of phenylalanine, tryptophan, naphthylalanine, phenylglycine, homophenylalanine, tyrosine, cyclohexylglycine, piperidine-2-carboxylic acid, cyclohexylalanine, 3-(3-benzothienyl)-alanine, 3-(2-quinolyl)-alanine, O-benzylserine, 3-(4-(benzyloxy)phenyl)-alanine, S-(4-methylbenzyl)cysteine, N-(naphthalen-2-yl)glutamine, and 3-(1,1′-biphenyl-4-yl)-alanine, each of which is optionally substituted with one or more substituents.
8. The compound of claim 1 , wherein n is 1, 2, or 3; wherein m is 3, 4, 5, 6, or 7; and wherein p is 2 or 3.
9. The compound of claim 1 , wherein Y is N and p is 2.
10. The compound of claim 1 , wherein q is 2 or 3.
11. The compound of claim 1 , wherein s is 1.
12. A compound having a structure according to Formula IV:
wherein:
A is a non-peptidic multivalent moiety;
each X is independently a first bonding group that links R 1 to A, wherein X is a divalent group;
each Z is independently a lone pair, H, halogen, CN, NO 2 , NH 2 , or alkyl;
each R 1 is independently a hydrophobic amino acid residue, or analog thereof, having an aromatic side chain;
each R 2 is independently absent or a moiety comprising hydrophobic residue;
each R 3 is independently a cargo moiety;
each m is independently an integer from 0 to 10; and
each n is independently an integer from 0 to 6.
13. The compound of claim 12 , wherein A is an aryl, heteroaryl, or nitrogen.
14. A compound having the structure of:
wherein:
each Z is independently a lone pair, H, halogen, CN, NO 2 , NH 2 , or alkyl;
each R 2 is independently absent or a moiety comprising hydrophobic residue; and
each R 3 is independently a cargo moiety.
15. The compound of claim 1 , wherein the cargo moiety comprises a therapeutic agent.
16. A pharmaceutical composition comprising a compound of claim 1 .
17. The compound of claim 1 , wherein R 1 is a D-amino acid residue.