IP Library › Granted Patent US 11,866,588
Granted Patent B2
US 11,866,588 · App. 16/448,186 · Granted Jan 9, 2024

Polymerizable near-IR dyes

Inventors: Soya Gamsey (San Francisco, CA); Alex Kutyavin (Lake Stevens, WA); Jacob William Clary (Moss Beach, CA)
Assignee: Profusa, Inc.
C09B69/105C09B23/0066C09B23/083C09B23/107C09K11/06C09K2211/1466
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Quick Facts
Patent No.
US 11,866,588
App. No.
16/448,186
Granted
Jan 9, 2024
Kind
B2
Abstract

The present invention is directed, in certain embodiments, to polymerizable near-IR dyes and polymers comprising said dyes as monomeric residues. In other embodiments, the present invention also relates to methods for the preparation of polymerizable near-IR dyes, and to the use of polymerizable near-IR dyes in the preparation of fluorescent polymers.

Claims (150)

1. A polymerizable near-IR dye having a structure according to formula (I):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

Z 1 is absent, O, NR Z1 , or S;

R Z1 is H, optionally substituted C 1 -C 10 alkyl, or optionally substituted C 2 -C 10 heteroalkyl;

X 1 is absent, optionally substituted C 6 -C 10 arylene, or optionally substituted C 1 -C 10 heteroarylene;

Z 2 is absent, NR X1 , O, S, NR X2 C(O), OC(O), SC(O), C(O)O, C(O)NR X3 , C(S)O, or C(O)S;

Z 3 is absent or H;

R X1 , R X2 , and R X3 are each independently H, optionally substituted C 1 -C 10 alkyl, or optionally substituted C 1 -C 10 heteroalkyl;

L 1 is absent, optionally substituted C 1 -C 30 alkylene, or optionally substituted C 1 -C 30 heteroalkylene;

Q 1 is NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ;

R Z3 is H, optionally substituted C 1 -C 10 alkyl, optionally substituted C 3 -C 10 cycloalkyl, optionally substituted C 1 -C 10 heteroalkyl, or optionally substituted C 1 -C 10 cycloheteroalkyl;

R Q1 is H, Me, Et, or n-Pr;

each of Y 1 and Y 4 , independently, is absent or optionally substituted C 1 -C 4 alkylene or optionally substituted C 2 -C 4 heteroalkylene;

each of Y 2 and Y 3 , independently, is absent or, together with the carbon atoms to which each is attached, form optionally substituted C 6 -C 10 aryl or optionally substituted C 2 -C 10 heteroaryl;

Y 5 is absent or N or CR 7 ;

R 7 is H, optionally substituted C 1 -C 10 alkyl, optionally substituted C 3 -C 10 cycloalkyl, optionally substituted C 1 -C 10 heteroalkyl, or optionally substituted C 1 -C 10 cycloheteroalkyl;

each of W 1 and W 2 , independently, is NR 2 , S, O, Se, or CR 3 R 4 ;

R 2 , R 3 , and R 4 are independently H, optionally substituted C 1 -C 30 alkyl, optionally substituted C 1 -C 30 heteroalkyl, or -L 2 -Q 2 ;

L 2 is optionally substituted C 1 -C 30 alkylene or optionally substituted C 1 -C 30 heteroalkylene;

Q 2 is H, C(R Q1 )CH 2 , C 6 H 4 CHCH 2 , NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ;

each of R 5 and R 6 , independently, is -L 3 -Q 3 , optionally substituted C 1 -C 30 alkyl, or optionally substituted C 6 -C 10 aryl;

L 3 is optionally substituted C 1 -C 30 alkylene or optionally substituted C 1 -C 30 heteroalkylene;

Q 3 is H, C(R Q1 )CH 2 , C 6 H 4 CHCH 2 , NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ; and

each k is independently 0 or 1.

2. The polymerizable near-IR dye of claim 1 wherein Z 1 is O.

3. The polymerizable near-IR dye of claim 1 , wherein the polymerizable near-IR dye has a structure according to formula (IA):

or a tautomer, salt, hydrate, or solvate thereof,

wherein

each R 3 is H, optionally substituted C 1 -C 30 alkyl, or optionally substituted C 1 -C 30 heteroalkyl; and

each R 4 is H, optionally substituted C 1 -C 30 alkyl, or optionally substituted C 1 -C 30 heteroalkyl.

4. The polymerizable near-IR dye of claim 3 , wherein each R 3 and R 4 is, independently, C 1 -C 5 alkyl optionally substituted with SO 3 H or B(OH) 2 .

5. The polymerizable near-IR dye of claim 1 , wherein the polymerizable near-IR dye has a structure according to formula (IB):

or a tautomer, salt, hydrate, or solvate thereof,

wherein

Y 2 , together with the carbon atoms to which it is attached, form optionally substituted C 6 -C 10 arylene or optionally substituted C 2 -C 10 heteroarylene; and

Y 3 , together with the carbon atoms to which it is attached, form optionally substituted C 6 -C 10 arylene or optionally substituted C 2 -C 10 heteroarylene.

6. The polymerizable near-IR dye of claim 1 , wherein the polymerizable near-IR dye has a structure according to formula (IC):

or a tautomer, salt, hydrate, or solvate thereof,

wherein each of R 8 -R 15 is, independently, H, SO 3 H, B(OH) 2 , optionally substituted amino, optionally substituted C 1 -C 10 alkyl, optionally substituted C 6 -C 10 aryl, optionally substituted ester, optionally substituted C 1 -C 10 alkoxy, optionally substituted C 6 -C 10 aryloxy, optionally substituted C 6 -C 10 thioalkyl, optionally substituted C 6 -C 10 thioaryl, optionally substituted C 1 -C 10 heteroalkyl, optionally substituted C 2 -C 10 heteroaryl, optionally substituted C 2 -C 10 heteroalkoxy, optionally substituted C 2 -C 10 heteroaryloxy, nitro, azido, carboxy, hydroxy; or, any two R 8 -R 15 in the ortho position to each other, together with the carbon atoms to which each is attached, form an optionally substituted phenyl ring.

7. The polymerizable near-IR dye of claim 6 , wherein the polymerizable near-IR dye has a structure according to formula (ID):

or a tautomer, salt, hydrate, or solvate thereof.

8. The polymerizable near-IR dye of claim 6 , wherein the polymerizable near-IR dye has a structure according to formula (IE):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

each of Y 6 , Y 7 , Y 8 , and Y 9 , is, independently, N or CR 16 ; and

R 16 is H, SO 3 H, B(OH) 2 , optionally substituted amino, optionally substituted C 1 -C 10 alkyl, optionally substituted C 6 -C 10 aryl, optionally substituted ester, optionally substituted C 1 -C 10 alkoxy, optionally substituted C 6 -C 10 aryloxy, optionally substituted C 6 -C 10 thioalkyl, optionally substituted C 6 -C 10 thioaryl, optionally substituted C 1 -C 10 heteroalkyl, optionally substituted C 2 -C 10 heteroaryl, optionally substituted C 2 -C 10 heteroalkoxy, optionally substituted C 2 -C 10 heteroaryloxy, nitro, azido, carboxy, or hydroxy.

9. The polymerizable near-IR dye of claim 6 , wherein the polymerizable near-IR dye has a structure according to formula (IF):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

Y 10 is O, S, or NR Z3 ,

Y 6 is N or CR 16 ; and

R 16 is H, SO 3 H, B(OH) 2 , optionally substituted amino, optionally substituted C 1 -C 10 alkyl, optionally substituted C 6 -C 10 aryl, optionally substituted ester, optionally substituted C 1 -C 10 alkoxy, optionally substituted C 6 -C 10 aryloxy, optionally substituted C 6 -C 10 thioalkyl, optionally substituted C 6 -C 10 thioaryl, optionally substituted C 1 -C 10 heteroalkyl, optionally substituted C 2 -C 10 heteroaryl, optionally substituted C 2 -C 10 heteroalkoxy, optionally substituted C 2 -C 10 heteroaryloxy, nitro, azido, carboxy, or hydroxy.

10. The polymerizable near-IR dye of claim 6 , wherein the polymerizable near-IR dye has a structure according to formula (IG):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

Y 10 is O, S, or NR Z3 ,

Y 6 is N or CR 16 ; and

R 16 is H, SO 3 H, B(OH) 2 , optionally substituted amino, optionally substituted C 1 -C 10 alkyl, optionally substituted C 6 -C 10 aryl, optionally substituted ester, optionally substituted C 1 -C 10 alkoxy, optionally substituted C 6 -C 10 aryloxy, optionally substituted C 6 -C 10 thioalkyl, optionally substituted C 6 -C 10 thioaryl, optionally substituted C 1 -C 10 heteroalkyl, optionally substituted C 2 -C 10 heteroaryl, optionally substituted C 2 -C 10 heteroalkoxy, optionally substituted C 2 -C 10 heteroaryloxy, nitro, azido, carboxy, or hydroxy.

11. The polymerizable near-IR dye of claim 1 , wherein the polymerizable near-IR dye is:

12. A polymer having a structure according to formula (II):

or a tautomer, salt, hydrate, or solvate thereof,

the polymer comprising a polymerizable near-IR dye and a monomer;

wherein:

Z 1 is absent, O, NR Z1 , or S;

R Z1 is H, optionally substituted C 1 -C 10 alkyl, or optionally substituted C 2 -C 10 heteroalkyl;

X 1 is absent, optionally substituted C 6 -C 10 arylene, or optionally substituted C 1 -C 10 heteroarylene;

Z 2 is absent, NR X1 , O, S, NR X2 C(O), OC(O), SC(O), C(O)O, C(O)NR X3 , C(S)O, or C(O)S;

Z 3 is absent or H;

R X1 , R X2 , and R X3 are each independently H, optionally substituted C 1 -C 10 alkyl, or optionally substituted C 1 -C 10 heteroalkyl;

L 1 is absent, optionally substituted C 1 -C 30 alkylene, or optionally substituted C 1 -C 30 heteroalkylene;

Q 1 is NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ;

R Z3 is H, optionally substituted C 1 -C 10 alkyl, optionally substituted C 3 -C 10 cycloalkyl, optionally substituted C 1 -C 10 heteroalkyl, or optionally substituted C 1 -C 10 cycloheteroalkyl;

R Q1 is H, Me, Et, or n-Pr;

each of Y 1 and Y 4 , independently, is absent or optionally substituted C 1 -C 4 alkylene or optionally substituted C 2 -C 4 heteroalkylene;

each of Y 2 and Y 3 , independently, is absent or, together with the carbon atoms to which each is attached, form optionally substituted C 6 -C 10 aryl or optionally substituted C 2 -C 10 heteroaryl;

Y 5 is absent or N or CR 7 ;

R 7 is H, optionally substituted C 1 -C 10 alkyl, optionally substituted C 3 -C 10 cycloalkyl, optionally substituted C 1 -C 10 heteroalkyl, or optionally substituted C 1 -C 10 cycloheteroalkyl;

each of W 1 and W 2 , independently, is NR 2 , S, O, Se, or CR 3 R 4 ;

R 2 , R 3 , and R 4 are independently H, optionally substituted C 1 -C 30 alkyl, optionally substituted C 1 -C 30 heteroalkyl, or -L 2 -Q 2 ;

L 2 is optionally substituted C 1 -C 30 alkylene or optionally substituted C 1 -C 30 heteroalkylene;

Q 2 is H, C(R Q1 )CH 2 , C 6 H 4 CHCH 2 , NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ;

each of R 5 and R 6 , independently, is -L 3 -Q 3 , optionally substituted C 1 -C 30 alkyl, or optionally substituted C 6 -C 10 aryl;

L 3 is optionally substituted C 1 -C 30 alkylene or optionally substituted C 1 -C 30 heteroalkylene;

Q 3 is H, C(R Q1 )CH 2 , C 6 H 4 CHCH 2 , NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ; and

each k is independently 0 or 1;

wherein, the group Q 1 is linked to a group J, and

J is at least one monomer comprising HEMA (hydroxyethyl methacrylate), DMA (N,N-Dimethylacrylamide), HPA (Hydroxypropyl acrylate), methyl methacrylate, acrylamide, PEGMA (polyethyleneglycol methacrylate), methacrylic acid, hydroxyethyl acrylate, N-vinyl pyrrolidone, methacryloylaminopropyl trimethylammonium chloride, diallyl dimethyl ammonium chloride, vinyl benzyl trimethyl ammonium chloride, or sodium sulfopropyl methacrylate.

13. The polymer claim 12 , wherein the polymer has a structure according to formula (IIA):

or a tautomer, salt, hydrate, or solvate thereof,

wherein

each R 3 is H, optionally substituted C 1 -C 30 alkyl, or optionally substituted C 1 -C 30 heteroalkyl; and

each R 4 is H, optionally substituted C 1 -C 30 alkyl, or optionally substituted C 1 -C 30 heteroalkyl.

14. The polymer of claim 12 , wherein the polymer has a structure according to formula (IIB):

or a tautomer, salt, hydrate, or solvate thereof,

wherein

Y 2 , together with the carbon atoms to which it is attached, form optionally substituted C 6 -C 10 arylene or optionally substituted C 2 -C 10 heteroarylene; and

Y 3 , together with the carbon atoms to which it is attached, form optionally substituted C 6 -C 10 arylene or optionally substituted C 2 -C 10 heteroarylene.

15. The polymer of claim 12 , wherein the polymerizable near-IR dye has a structure according to formula (IID):

or a tautomer, salt, hydrate, or solvate thereof,

wherein each of R 1 , R 9 , R 12 , and R 13 is, independently, H, SO 3 H, B(OH) 2 , optionally substituted amino, optionally substituted C 1 -C 10 alkyl, optionally substituted C 6 -C 10 aryl, optionally substituted ester, optionally substituted C 1 -C 10 alkoxy, optionally substituted C 6 -C 10 aryloxy, optionally substituted C 6 -C 10 thioalkyl, optionally substituted C 6 -C 10 thioaryl, optionally substituted C 1 -C 10 heteroalkyl, optionally substituted C 2 -C 10 heteroaryl, optionally substituted C 2 -C 10 heteroalkoxy, optionally substituted C 2 -C 10 heteroaryloxy, nitro, azido, carboxy, hydroxy; or, R 8 and R 9 or R 12 and R 13 are, independently, together with the carbon atoms to which each is attached, form an optionally substituted phenyl ring.

16. The polymer of claim 15 , wherein the polymer has a structure according to formula (IIE):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

each of Y 6 , Y 7 , Y 8 , and Y 9 is, independently, N or CR 16 ; and

R 16 is H, SO 3 H, B(OH) 2 , optionally substituted amino, optionally substituted C 1 -C 10 alkyl, optionally substituted C 6 -C 10 aryl, optionally substituted ester, optionally substituted C 1 -C 10 alkoxy, optionally substituted C 6 -C 10 aryloxy, optionally substituted C 6 -C 10 thioalkyl, optionally substituted C 6 -C 10 thioaryl, optionally substituted C 1 -C 10 heteroalkyl, optionally substituted C 2 -C 10 heteroaryl, optionally substituted C 2 -C 10 heteroalkoxy, optionally substituted C 2 -C 10 heteroaryloxy, nitro, azido, carboxy, or hydroxy.

17. The polymer of claim 16 , wherein the polymer has a structure according to formula (IIF):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

Y 6 is CR 16 ;

Y 10 is O, S, or NR Z3 ; and

R 16 is H.

18. The polymer of claim 17 , wherein R Q1 is methyl.

19. A polymer comprising a polymerizable near-IR dye and a monomer, said polymer having a repeating unit according to formula (III):

wherein:

each D 1 and D 2 is independently a residue of a polymerizable near-IR dye, wherein said polymerizable near-IR dye has a structure according to formula (I):

or a tautomer, salt, hydrate, or solvate thereof,

wherein:

Z 1 is absent, O, NR Z1 , or S;

R Z1 is H, optionally substituted C 1 -C 10 alkyl, or optionally substituted C 2 -C 10 heteroalkyl;

X 1 is absent, optionally substituted C 6 -C 10 arylene, or optionally substituted C 1 -C 10 heteroarylene;

Z 2 is absent, NR X1 , O, S, NR X2 C(O), OC(O), SC(O), C(O)O, C(O)NR X3 , C(S)O, or C(O)S;

Z 3 is absent or H;

R X1 , R X2 , and R X3 are each independently H, optionally substituted C 1 -C 10 alkyl, or optionally substituted C 1 -C 10 heteroalkyl;

L 1 is absent, optionally substituted C 1 -C 30 alkylene, or optionally substituted C 1 -C 30 heteroalkylene;

Q 1 is NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ;

R Z3 is H, optionally substituted C 1 -C 10 alkyl, optionally substituted C 3 -C 10 cycloalkyl, optionally substituted C 1 -C 10 heteroalkyl, or optionally substituted C 1 -C 10 cycloheteroalkyl;

R Q1 is H, Me, Et, or n-Pr;

each of Y 1 and Y 4 , independently, is absent or optionally substituted C 1 -C 4 alkylene or optionally substituted C 2 -C 4 heteroalkylene;

each of Y 2 and Y 3 , independently, is absent or, together with the carbon atoms to which each is attached, form optionally substituted C 6 -C 10 aryl or optionally substituted C 2 -C 10 heteroaryl;

Y 5 is absent or N or CR 7 ;

R 7 is H, optionally substituted C 1 -C 10 alkyl, optionally substituted C 3 -C 10 cycloalkyl, optionally substituted C 1 -C 10 heteroalkyl, or optionally substituted C 1 -C 10 cycloheteroalkyl;

each of W 1 and W 2 , independently, is NR 2 , S, O, Se, or CR 3 R 4 ;

R 2 , R 3 , and R 4 are independently H, optionally substituted C 1 -C 30 alkyl, optionally substituted C 1 -C 30 heteroalkyl, or -L 2 -Q 2 ;

L 2 is optionally substituted C 1 -C 30 alkylene or optionally substituted C 1 -C 30 heteroalkylene;

Q 2 is H, C(R Q1 )CH 2 , C 6 H 4 CHCH 2 , NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ;

each of R 5 and R 6 , independently, is -L 3 -Q 3 , optionally substituted C 1 -C 30 alkyl, or optionally substituted C 6 -C 10 aryl;

L 3 is optionally substituted C 1 -C 30 alkylene or optionally substituted C 1 -C 30 heteroalkylene;

Q 3 is H, C(R Q1 )CH 2 , C 6 H 4 CHCH 2 , NR Z3 C(O)C(R Q1 )CH 2 , OC(O)C(R Q1 )CH 2 , or SC(O)C(R Q1 )CH 2 ; and

each k is independently 0 or 1;

with the proviso that

each J 1 and J 2 is a residue of HEMA (hydroxyethyl methacrylate), DMA (N,N-Dimethylacrylamide), HPA (Hydroxypropyl acrylate), methyl methacrylate, acrylamide, PEGMA (polyethyleneglycol methacrylate), methacrylic acid, hydroxyethyl acrylate, N-vinyl pyrrolidone, methacryloylaminopropyl trimethylammonium chloride, diallyl dimethyl ammonium chloride, vinyl benzyl trimethyl ammonium chloride, or sodium sulfopropyl methacrylate,

wherein:

D 1 and D 2 can be the same or different;

J 1 and J 2 can be the same or different;

m is an integer from 1 to 100;

n is an integer from 0 to 100;

a is an integer from 0 to 100; and

z is an integer from 0 to 100.

20. The polymer of claim 19 wherein the polymerizable near-IR dye is:

Assignments (2)
LIEN Recorded Jul 21, 2025
From: PROFUSA, INC.
To: ASCENT PARTNERS FUND, LLC
Reel/Frame 071773/0828 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 24, 2020
From: GAMSEY, SOYA; KUTYAVIN, ALEX; CLARY, JACOB WILLIAM
To: PROFUSA, INC.
Reel/Frame 052203/0022 →
Continuity (3)
Continuation PCTUS2017067847 · Dec 21, 2017
Provisional Application 62437599 · Dec 21, 2016
Related Publication 20200140690A1 · May 7, 2020
Cited By (1)
US 12,285,250