Proteins binding HER2, NKG2D and CD16
Multi-specific binding proteins that bind HER2, the NKG2D receptor, and CD 16 are described, as well as pharmaceutical compositions and therapeutic methods useful for the treatment of cancer.
1. A protein comprising:
(a) a first antigen-binding site that binds NKG2D;
(b) a second antigen-binding site that binds HER2; and
(c) a first antibody Fc domain of human IgG1 or a portion thereof and a second antibody Fc domain of human IgG1 or a portion thereof that together are sufficient to bind CD16, wherein the first antibody Fc domain or the portion thereof and the second antibody Fc domain or the portion thereof comprise different amino acid mutations to promote heterodimerization,
wherein the first antigen-binding site comprises a heavy chain variable domain comprising the amino acid sequence of SEQ ID NO:1 and a light chain variable domain comprising the amino acid sequence of SEQ ID NO:2.
2. The protein of claim 1 , wherein the first antigen-binding site binds to NKG2D in humans and non-human primates.
3. The protein according to claim 1 , wherein the second antigen-binding site comprises a heavy chain variable domain and a light chain variable domain.
4. The protein according to claim 3 , wherein the heavy chain variable domain and the light chain variable domain of the second antigen-binding site are present on the same polypeptide.
5. The protein according to claim 1 , wherein the second antigen-binding site comprises:
a heavy chain CDR1 sequence identical to the amino acid sequence of SEQ ID NO:50;
a heavy chain CDR2 sequence identical to the amino acid sequence of SEQ ID NO:51;
a heavy chain CDR3 sequence identical to the amino acid sequence of SEQ ID NO:52;
a light chain CDR1 sequence identical to the amino acid sequence of SEQ ID NO:54;
a light chain CDR2 sequence identical to the amino acid sequence of SEQ ID NO:55; and
a light chain CDR3 sequence identical to the amino acid sequence of SEQ ID NO:56.
6. The protein according to claim 5 , wherein the second antigen-binding site comprises a heavy chain variable domain comprising an amino acid sequence at least 90% identical to SEQ ID NO:49 and a light chain variable domain comprising an amino acid sequence at least 90% identical to SEQ ID NO:53.
7. The protein according to claim 1 , wherein the second antigen-binding site comprises:
a heavy chain CDR1 sequence identical to the amino acid sequence of SEQ ID NO:77;
a heavy chain CDR2 sequence identical to the amino acid sequence of SEQ ID NO:78;
a heavy chain CDR3 sequence identical to the amino acid sequence of SEQ ID NO:79;
a light chain CDR1 sequence identical to the amino acid sequence of SEQ ID NO:80;
a light chain CDR2 sequence identical to the amino acid sequence of SEQ ID NO:81; and
a light chain CDR3 sequence identical to the amino acid sequence of SEQ ID NO:82.
8. The protein according to claim 7 , wherein the second antigen-binding site comprises a heavy chain variable domain comprising an amino acid sequence at least 90% identical to SEQ ID NO:57 and a light chain variable domain comprising an amino acid sequence at least 90% identical to SEQ ID NO:58.
9. The protein according to claim 1 , wherein the first and second antibody Fc domains or the portions thereof each comprise hinge and CH2 domains.
10. The protein according to claim 9 , wherein the first and second antibody Fc domains or the portions thereof each comprise an amino acid sequence at least 90% identical to amino acids 234-332 of a human IgG1 antibody.
11. The protein according to claim 9 , wherein the first and second antibody Fc domains each comprise an amino acid sequence at least 90% identical to the Fc domain of human IgG1, and the amino acid mutations to promote heterodimerization comprise one or more mutations at Q347, Y349, T350, L351, S354, E356, E357, K360, Q362, S364, T366, L368, K370, N390, K392, T394, D399, S400, D401, F405, Y407, K409, T411, and/or K439, numbered according to the EU index as in Kabat.
12. A formulation comprising a protein according to claim 1 and a pharmaceutically acceptable carrier.
13. A cell comprising one or more nucleic acids encoding a protein according to claim 1 .
14. The protein according to claim 1 , wherein the second antigen-binding site comprises:
a heavy chain CDR1 sequence identical to the amino acid sequence of SEQ ID NO:83;
a heavy chain CDR2 sequence identical to the amino acid sequence of SEQ ID NO:84;
a heavy chain CDR3 sequence identical to the amino acid sequence of SEQ ID NO:85;
a light chain CDR1 sequence identical to the amino acid sequence of SEQ ID NO:86;
a light chain CDR2 sequence identical to the amino acid sequence of SEQ ID NO:87; and
a light chain CDR3 sequence identical to the amino acid sequence of SEQ ID NO:88.
15. The protein according to claim 14 , wherein the second antigen-binding site comprises a heavy chain variable domain comprising an amino acid sequence at least 90% identical to SEQ ID NO:59 and a light chain variable domain comprising an amino acid sequence at least 90% identical to SEQ ID NO:60.