IP Library › Granted Patent US 11,932,635
Granted Patent B2
US 11,932,635 · App. 18/059,232 · Granted Mar 19, 2024

CRBN ligands and uses thereof

Inventors: Nello Mainolfi (Belmont, MA); Nan Ji (Arlington, MA); Arthur F. Kluge (Gainesville, FL)
Assignee: Kymera Therapeutics, Inc.
C07D417/04C07D211/88C07D239/22C07D401/04C07D401/12C07D401/14C07D403/04C07D403/06C07D413/04C07D413/14C07D471/04C07D487/04
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Quick Facts
Patent No.
US 11,932,635
App. No.
18/059,232
Granted
Mar 19, 2024
Kind
B2
Abstract

The present invention provides compounds, compositions thereof, and methods of using the same for the inhibition of CRBN, and the treatment of CRBN-mediated disorders.

Claims (112)

1. A method of treating a CRBN-mediated disorder, disease, or condition in a patient comprising administering to said patient a compound of Formula I-b or I-k′:

or a pharmaceutically acceptable salt thereof, wherein:

X 3 is a bivalent moiety selected from a —C(R 1 )F—, —CF 2 —, and —C(R′) 2 —;

L is —S—;

each R 1 is independently hydrogen, halogen, —CN, —OR, —SR, —S(O)R, —S(O) 2 R, —N(R) 2 , —P(O)(OR) 2 , —P(O)(NR 2 )OR, —P(O)(NR 2 ) 2 , —Si(OH)R 2 , —Si(OH) 2 R, or an optionally substituted C 1-4 aliphatic; or

two R 1 groups on the same carbon are optionally taken together with their intervening atoms to form a 3-6 membered spiro fused ring or a 4-7 membered heterocyclic ring having 1-2 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur;

two R 1 groups on adjacent carbon atoms are optionally taken together with their intervening atoms to form a 3-7 membered saturated, partially unsaturated, carbocyclic ring or heterocyclic ring having 1-3 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, or a 7-13 membered saturated, partially unsaturated, bridged heterocyclic ring, or a spiro heterocyclic ring having 1-3 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur;

each R is independently hydrogen or an optionally substituted group selected from C 1-6 aliphatic, phenyl, a 4-7 membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, a 5-6 membered heteroaryl ring having 1-4 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, a 7-13 membered saturated, partially unsaturated, bridged heterocyclic ring, or a spiro heterocyclic ring having 1-3 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur, and a 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur; or

two R groups on the same nitrogen are optionally taken together with their intervening atoms to form a 4-8 membered saturated, partially unsaturated, or heteroaryl monocyclic ring having 0-1 heteroatom, in addition to the nitrogen, independently selected from boron, nitrogen, oxygen, silicon, and sulfur, or a 7-13 membered saturated, partially unsaturated, bridged heterocyclic ring, or a spiro heterocyclic ring having 0-2 heteroatoms, in addition to the nitrogen, independently selected from boron, nitrogen, oxygen, silicon, and sulfur;

each R 2 is independently hydrogen, halogen, —CN, —NO 2 , —OR, —SR, —NR 2 , —Si(OH) 2 R, —Si(OH)(R) 2 , —Si(R) 3 , —S(O) 2 R, —S(O) 2 NR 2 —S(O)R, —C(O)R, —C(O)OR, —C(O)NR 2 , —C(O)N(R)OR, —OC(O)R, —OC(O)NR 2 , —N(R)C(O)OR, —N(R)C(O)R, —N(R)C(O)NR 2 , —N(R)S(O) 2 R, —N(R)S(O) 2 NR 2 , —P(O)(OR) 2 , —P(O)(NR 2 )OR, —P(O)(NR 2 ) 2 , optionally substituted C 1-6 aliphatic, optionally substituted phenyl, optionally substituted 4-7 membered saturated or partially unsaturated heterocyclic ring having 1-3 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, optionally substituted 5-6 membered heteroaryl ring having 1-4 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, optionally substituted 7-13 membered saturated, partially unsaturated, bridged heterocyclic ring, or a spiro heterocyclic ring having 1-3 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur, or a 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur;

Ring B is selected from a 3 to 7-membered saturated or partially unsaturated carbocyclic ring, phenyl, 8-10 membered bicyclic carbocyclic aromatic ring, 4-7 membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, 5-6 membered heteroaryl ring having 1-4 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur, 7-13 membered saturated, partially unsaturated, bridged heterocyclic ring, or a spiro heterocyclic ring having 1-3 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur, or a 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur; wherein Ring B is optionally further substituted with 1-2 oxo groups;

m is 0, 1, 2, 3, or 4; and

n is 0, 1, 2, 3, or 4; provided that the compound is other than the following, or a pharmaceutically acceptable salt thereof:

2. The method of claim 1 , wherein the CRBN-mediated disorder, disease, or condition is selected from proliferative disorders, neurological disorders and disorders associated with transplantation.

3. The method of claim 2 , wherein the proliferative disorder is a hematological cancer.

4. The method of claim 2 , wherein the proliferative disorder is a leukemia.

5. The method of claim 4 , wherein the leukemia is selected from acute leukemia, acute lymphoblastic leukemia (ALL), chronic lymphocytic leukemia (CLL), acute myelogenous leukemia, acute myeloid leukemia (AML), adult acute basophilic leukemia, adult acute eosinophilic leukemia, adult acute megakaryoblastic leukemia, adult acute minimally differentiated myeloid leukemia, adult acute monoblastic leukemia, adult acute monocytic leukemia, adult acute myeloblastic leukemia with maturation, adult acute myeloblastic leukemia without maturation, adult acute myeloid leukemia with abnormalities, adult acute myelomonocytic leukemia, adult erythroleukemia, adult pure erythroid leukemia, secondary acute myeloid leukemia, untreated adult acute myeloid leukemia, adult acute myeloid leukemia in remission, adult acute promyelocytic leukemia with PML-RARA, alkylating agent-related acute myeloid leukemia, prolymphocytic leukemia, and chronic myelomonocytic leukemia.

6. The method of claim 2 , wherein the proliferative disorder is a lymphoma.

7. The method of claim 6 , wherein the lymphoma is selected from adult grade III lymphomatoid granulomatosis, adult nasal type extranodal NK/T-cell lymphoma, anaplastic large cell lymphoma, angioimmunoblastic T-cell lymphoma, cutaneous B-Cell non-Hodgkin lymphoma, extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue, hepatosplenic T-cell lymphoma, intraocular lymphoma, lymphomatous involvement of non-cutaneous extranodal site, mature T-cell and NK-cell non-Hodgkin lymphoma, nodal marginal zone lymphoma, post-transplant lymphoproliferative disorder, recurrent adult Burkitt lymphoma, recurrent adult diffuse large cell lymphoma, recurrent adult diffuse mixed cell lymphoma, recurrent adult diffuse small cleaved cell lymphoma, recurrent adult grade III lymphomatoid granulomatosis, recurrent adult immunoblastic lymphoma, recurrent adult lymphoblastic lymphoma, recurrent adult T-cell leukemia/lymphoma, recurrent cutaneous T-cell non-Hodgkin lymphoma, recurrent grade 1 follicular lymphoma, recurrent grade 2 follicular lymphoma, recurrent grade 3 follicular lymphoma, recurrent mantle cell lymphoma, recurrent marginal zone lymphoma, recurrent mycosis fungoides and Sezary syndrome, recurrent small lymphocytic lymphoma, refractory chronic lymphocytic leukemia, refractory hairy cell leukemia, Richter syndrome, small intestinal lymphoma, splenic marginal zone lymphoma, T-cell large granular lymphocyte leukemia, testicular lymphoma, Waldenstrom macroglobulinemia, adult T-cell leukemia-lymphoma, peripheral T-cell lymphoma, B-cell lymphoma, Hodgkin's disease, cutaneous T-cell lymphoma, diffuse large B-cell lymphoma, MALT lymphoma, mantle cell lymphoma, non-Hodgkins lymphoma, central nervous system lymphoma, refractory primary-cutaneous large B-cell lymphoma (Leg-type), relapsed or refractory chronic lymphocytic leukemia, refractory anemia, refractory anemia with excess blasts, refractory anemia with ringed sideroblasts, refractory cytopenia with multilineage dysplasia, and secondary myelodysplastic syndromes.

8. The method of claim 2 , wherein the neurological disorder is Alzheimer's disease.

9. The method of claim 2 , wherein the disorder associated with transplantation is graft-versus-host disease.

10. The method of claim 1 , wherein R 1 is selected from hydrogen, halogen, —CN, —OR, —N(R) 2 , and C 1-4 alkyl.

11. The method of claim 1 , wherein R 2 is selected from hydrogen, halogen, —CN, —NO 2 , —OR, —SR, —N(R) 2 , —C(O)R, —N(R)C(O)R, —C(O)OR, —C(O)NR 2 , —C(O)N(R)OR, —OC(O)R, —OC(O)NR 2 , —N(R)C(O) OR, —N(R)C(O)NR 2 , —N(R)S(O) 2 R, optionally substituted C 1-6 aliphatic, optionally substituted phenyl, an optionally substituted 4-7 membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur, or an optionally substituted 5-6 membered heteroaryl ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, and sulfur.

12. The method of claim 1 , wherein R 2 is an optionally substituted C 1-6 aliphatic.

13. The method of claim 1 , wherein R 2 is an optionally substituted phenyl.

14. The method of claim 1 , wherein Ring B is a 4-7 membered saturated or partially unsaturated heterocyclic ring having 1-2 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur.

15. The method of claim 1 , wherein Ring B is a 5-6 membered heteroaryl ring having 1-4 heteroatoms independently selected from boron, nitrogen, oxygen, silicon, and sulfur.

16. The method of claim 1 , wherein Ring B is a 7-13 membered saturated, partially unsaturated, bridged heterocyclic ring, or a spiro heterocyclic ring having 1-3 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur.

17. The method of claim 1 , wherein Ring B is an 8-10 membered bicyclic heteroaryl ring having 1-4 heteroatoms, independently selected from boron, nitrogen, oxygen, silicon, and sulfur.

18. The method of claim 1 , wherein Ring B is an 8-10 membered bicyclic carbocyclic aromatic ring.

19. The compound of claim 1 , wherein

is selected from

triazolyl,

20. The method of claim 1 , wherein said compound is selected from the following:

I-4

I-5

I-6

I-9

I-10

I-11

I-12

I-13

I-14

I-15

I-16

I-17

I-58

I-60

I-61

I-62

I-63

I-66

I-67

I-68

I-69

I-70

I-72

I-73

I-74

I-75

I-79

I-80

I-83

I-84

I-85

I-86

I-87

I-89

I-90

I-92

I-93

I-94

I-95

I-96

I-97

I-98

I-99

I-100

I-101

I-102

I-104

I-105

I-108

I-109

I-110

I-111

I-112

I-113

I-114

I-116

I-117

I-120

I-121

I-122

I-123

I-126

I-127

I-130

I-131

I-132

I-133

I-134

I-135

I-136

I-137

I-138

I-139

I-140

I-141

I-142

or a pharmaceutically acceptable salt thereof.

21. The method of claim 1 , wherein the compound is administered in a pharmaceutical composition comprising a pharmaceutically acceptable carrier, adjuvant, or vehicle.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 1, 2023
From: MAINOLFI, NELLO; JI, NAN; KLUGE, ARTHUR F.
To: KYMERA THERAPEUTICS, INC.
Reel/Frame 062843/0078 →
Continuity (3)
Division 16961362
Provisional Application 62616713 · Jan 12, 2018
Related Publication 20230234950A1 · Jul 27, 2023
Cited By (1)
US 12,540,127