Bispecific antibodies and uses thereof
This disclosure relates to bispecific antibodies or antigen-binding fragments thereof, wherein the bispecific antibodies or antigen-binding fragments thereof specifically bind to two different antigens with different binding affinities.
1. A bispecific antibody or antigen-binding fragment thereof comprising
a first heavy chain variable region (VH1),
a second heavy chain variable region (VH2),
a first light chain variable region (VL1), and
a second light chain variable region (VL2),
wherein the first heavy chain variable region and the first light chain variable region associate with each other, forming a first antigen binding region that specifically binds to a first antigen, and
the second heavy chain variable region and the second light chain variable region associate with each other, forming a second antigen binding region that specifically binds to a second antigen,
wherein the first antigen is PD-L1, and the second antigen is CD55, and
(1) the VH1 comprises complementarity determining regions (CDRs) 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 41, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 42, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 43;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 47, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 48, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 49;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 53, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 54, and the VL1 CDR3 comprises the amino acid sequence of SEO ID NO: 55; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 53, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 54, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 55;
(2) the VH1 comprises CDRs 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 41, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 42, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 43;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 47, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 48, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 49;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 61; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 61;
(3) the VH1 comprises CDRs 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 44, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 45, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 46;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 50, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 51, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 52;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 56, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 57, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 58; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 56, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 57, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 58; or
(4) the VH1 comprises CDRs 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 44, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 45, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 46;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 50, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 51, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 52;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 61; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 61.
2. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein the first antigen binding region specifically binds to the first antigen with a binding affinity greater than 10 8 M −1 .
3. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein the bispecific antibody or the antigen-binding fragment thereof comprises a first heavy chain comprising the first heavy chain variable region, and a second heavy chain comprising the second heavy chain variable region, wherein the first heavy chain and the second heavy chain associate with each other by the knobs into holes approach.
4. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein the second antigen binding region specifically binds to the second antigen with a binding affinity less than 10 6 M −1 .
5. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein the binding affinity of the first antigen binding region when it binds to the first antigen is at least 100 times greater than the binding affinity of the second antigen binding region when it binds to the second antigen.
6. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein
the first heavy chain variable region (VH1) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 4 or SEQ ID NO: 12;
the second heavy chain variable region (VH2) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 5;
the first light chain variable region (VL1) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 6; and
the second light chain variable region (VL2) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 6.
7. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein
the first heavy chain variable region (VH1) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 4 or SEQ ID NO: 12;
the second heavy chain variable region (VH2) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 5;
the first light chain variable region (VL1) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 7; and
the second light chain variable region (VL2) comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 7.
8. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , comprising: a first polypeptide comprising the VH1, a second polypeptide comprising the VH2, a third polypeptide comprising the VL1, and a fourth polypeptide comprising the VL2, wherein
the first polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 65;
the second polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 66;
the third polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 67; and
the fourth polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 67.
9. An antibody or an antigen-binding fragment thereof that binds to PD-L1 and CD55, comprising
a first heavy chain variable region (VH1) comprising CDR1, CDR2, and CDR3, wherein the VH1 CDR1, VH1 CDR2, and VH1 CDR3 are identical to CDR1, CDR2, and CDR3 present in SEQ ID NO: 4 or 12, respectively;
a second heavy chain variable region (VH2) comprising CDR1, CDR2, and CDR3, wherein the VH2 CDR1, VH2 CDR2, and VH2 CDR3 are identical to CDR1, CDR2, and CDR3 present in SEQ ID NO: 5, respectively;
a first light chain variable region (VL1) comprising CDR1, CDR2, and CDR3, wherein the VL1 CDR1, VL1 CDR2, and VL1 CDR3 are identical to CDR1, CDR2, and CDR3 present in SEQ ID NO: 6 or 7, respectively; and
a second light chain variable region (VL2) comprising CDR1, CDR2, and CDR3, wherein the VL2 CDR1, VL2 CDR2, and VL2 CDR3 are identical to CDR1, CDR2, and CDR3 present in SEQ ID NO: 6 or 7, respectively.
10. The antibody or the antigen-binding fragment thereof of claim 9 , wherein the antibody or the antigen-binding fragment thereof is a bispecific antibody or antigen-binding fragment thereof.
11. The antibody or the antigen-binding fragment thereof of claim 9 , wherein
the VH1 comprises the amino acid sequence of SEQ ID NO: 4 or 12;
the VH2 comprise the amino acid sequence of SEQ ID NO: 5;
the VL1 comprise the amino acid sequence of SEQ ID NO: 6; and
the VL2 comprises the amino acid sequence of SEQ ID NO: 6.
12. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , comprising: a first polypeptide comprising the VH1, a second polypeptide comprising the VH2, a third polypeptide comprising the VL1, and a fourth polypeptide comprising the VL2, wherein
the first polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 65;
the second polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 66;
the third polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 68; and
the fourth polypeptide comprises an amino acid sequence that is at least 90% identical to SEQ ID NO: 68.
13. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein the binding affinity of the first antigen binding region when it binds to the first antigen is at least 1000 times greater than the binding affinity of the second antigen binding region when it binds to the second antigen.
14. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein the first light chain variable region and the second light chain variable region are identical.
15. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein according to Kabat definition, the VH1 comprises complementarity determining regions (CDRs) 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 41, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 42, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 43;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 47, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 48, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 49;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 53, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 54, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 55; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 53, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 54, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 55.
16. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein according to Kabat definition, the VH1 comprises complementarity determining regions (CDRs) 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 41, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 42, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 43;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 47, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 48, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 49;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 61; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 61.
17. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein according to Chothia definition, the VH1 comprises complementarity determining regions (CDRs) 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 44, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 45, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 46;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 50, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 51, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 52;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 56, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 57, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 58; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 56, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 57, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 58.
18. The bispecific antibody or the antigen-binding fragment thereof of claim 1 , wherein according to Chothia definition, the VH1 comprises complementarity determining regions (CDRs) 1, 2, and 3, wherein VH1 CDR1 comprises the amino acid sequence of SEQ ID NO: 44, the VH1 CDR2 comprises the amino acid sequence of SEQ ID NO: 45, and the VH1 CDR3 comprises the amino acid sequence of SEQ ID NO: 46;
the VH2 comprises CDRs 1, 2, and 3, wherein VH2 CDR1 comprises the amino acid sequence of SEQ ID NO: 50, the VH2 CDR2 comprises the amino acid sequence of SEQ ID NO: 51, and the VH2 CDR3 comprises the amino acid sequence of SEQ ID NO: 52;
the VL1 comprises CDRs 1, 2, and 3, wherein VL1 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL1 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL1 CDR3 comprises the amino acid sequence of SEQ ID NO: 61; and
the VL2 comprises CDRs 1, 2, and 3, wherein VL2 CDR1 comprises the amino acid sequence of SEQ ID NO: 59, the VL2 CDR2 comprises the amino acid sequence of SEQ ID NO: 60, and the VL2 CDR3 comprises the amino acid sequence of SEQ ID NO: 61.
19. The antibody or the antigen-binding fragment thereof of claim 9 , wherein
the VH1 comprises the amino acid sequence of SEQ ID NO: 4 or 12;
the VH2 comprise the amino acid sequence of SEQ ID NO: 5;
the VL1 comprise the amino acid sequence of SEQ ID NO: 7; and
the VL2 comprises the amino acid sequence of SEQ ID NO: 7.