IP Library › Granted Patent US 12,077,594
Granted Patent B2
US 12,077,594 · App. 18/006,525 · Granted Sep 3, 2024

IL2RG binding molecules and methods of use

Inventors: Robert Kastelein (Menlo Park, CA); Deepti Rokkam (Menlo Park, CA); Patrick J. Lupardus (Menlo Park, CA); Sandro Vivona (Menlo Park, CA)
Assignee: Synthekine, Inc.
C07K16/2866A61K45/06C07K2317/22C07K2317/24C07K2317/565C07K2317/569C07K2317/92C07K2319/00
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Quick Facts
Patent No.
US 12,077,594
App. No.
18/006,525
Granted
Sep 3, 2024
Kind
B2
Abstract

The present disclosure relates to biologically active molecules comprising a single domain antibody (sdAb) that specifically binds to the extracellular domain of human IL2Rg, compositions comprising such antibodies, and methods of use thereof.

Claims (266)

1. An IL2Rg binding molecule that specifically binds to the extracellular domain of IL2Rg, wherein the IL2Rg binding molecule comprises a single domain antibody (sdAb), and wherein the sdAb comprises a complementary determining region 1 (CDR1), a CDR2, and a CDR3 as shown in a row of the table below:

CDR1

CDR2

CDR3

FTFDDSDMG

TISSDGSTYYADSVKG

DFMIAIQAPGAGC

(SEQ ID NO: 2)

(SEQ ID NO: 3)

(SEQ ID NO: 4)

FSFSSYPMT

TIASDGGSTAYAASVEG

GYGDGTPA

(SEQ ID NO: 6)

(SEQ ID NO: 7)

(SEQ ID NO: 8)

FTFDDREMN

TISSDGSTYYADSVKG

DFMIAIQAPGAGC

(SEQ ID NO: 10)

(SEQ ID NO: 11)

(SEQ ID NO: 12)

FTFDDSDMG

TISSDGNTYYTDSVKG

EPRGYYSNYGGRREC

(SEQ ID NO: 14)

(SEQ ID NO: 15)

NY

(SEQ ID NO: 16)

FSFSSYPMT

TIASDGGSTAYAASVEG

GYGDGTPA

(SEQ ID NO: 18)

(SEQ ID NO: 19)

(SEQ ID NO: 20)

FTFSNAHMS

SIYSGGSTWYADSVKG

NRLHYYSDDDSL

(SEQ ID NO: 22)

(SEQ ID NO: 23)

(SEQ ID NO: 24)

FTFDDREMN

TISSDGSTYYADSVKG

DFMIAIQAPGAGC

(SEQ ID NO: 26)

(SEQ ID NO: 27)

(SEQ ID NO: 28)

YTFSSYCMG

ALGGGSTYYADSVKG

AWVACLEFGGSWYDL

(SEQ ID NO: 30)

(SEQ ID NO 31)

(SEQ ID NO 32)

ARYKH

FTFDDSDMG

TISSDGSTYYADSVKG

EPRGYYSNYGGRREC

(SEQ ID NO 34)

(SEQ ID NO 35)

NY

(SEQ ID NO 36)

SIYSSAYIG

GIYTRDGSTAYADSVKG

GRRTKSYVYIFRPEE

(SEQ ID NO 38)

(SEQ ID NO 39)

YNY

(SEQ ID NO 40)

FTFSSAHMS

SIYSGGGTFYADSVKG

NRLHYYSDDDSL

(SEQ ID NO 42)

(SEQ ID NO 43)

(SEQ ID NO 44)

FTFSNAHMS

SIYSGGSTWYADSVKG

NRLHYYSDDDSL

(SEQ ID NO 46)

(SEQ ID NO 47)

(SEQ ID NO 48)

FIFDDSDMG

TISSDGSTYYADSVKG

EPRGYYSNYGGRREC

(SEQ ID NO 50)

(SEQ ID NO 51)

NY

(SEQ ID NO 52)

FTADDSDMG

TISSDGSTYYADSVKG

EPRGYYSNYGGRREC

(SEQ ID NO 54)

(SEQ ID NO 55)

NY

(SEQ ID NO 56)

FTFSSAHMS

SIYSGGGTFYADSVKG

NRLHYYSDDDSL

(SEQ ID NO 58)

(SEQ ID NO 59)

(SEQ ID NO 60)

FTFSNAHMS

SIYSGGSTWYADSVKG

NRLHYYSDDDSL

(SEQ ID NO 62)

(SEQ ID NO 63)

(SEQ ID NO 64)

FTFSNAHMS

SIYSGGSTWYADSVKG

NRLHYYSDDDSL

(SEQ ID NO 66)

(SEQ ID NO 67)

(SEQ ID NO 68

FTFSSYPMT

TIASDGGSTAYAASVEG

GYGDGTPA

(SEQ ID NO 70)

(SEQ ID NO 71)

(SEQ ID NO 72)

FTFDDREMN

TISSDGSTYYADSVKG

DFMIAIQAPGAGC

(SEQ ID NO 74)

(SEQ ID NO 75)

(SEQ ID NO 76)

FTFDDSDMG

TISSDGSTYYADSVKG

EPRGYYSNYGGRREC

(SEQ ID NO 78)

(SEQ ID NO 79)

NY

(SEQ ID NO 80)

YTSCMG

TIYTRGRSIYYADSVKG

GGYSWSAGCEFNY

(SEQ ID NO 82)

(SEQ ID NO 83)

(SEQ ID NO 84)

FSFSSYPMT

TIASDGGSTAYAASVEG

GYGDGTPA

(SEQ ID NO 86)

(SEQ ID NO 87)

(SEQ ID NO 88)

FSFSSYPMT

TIASDGGSTAYAASVEG

GYGDGTPA

(SEQ ID NO 90)

(SEQ ID NO 91)

(SEQ ID NO 92).

2. The IL2Rg binding molecule of claim 1 , wherein the sdAb has at least 95% amino acid sequence identity to a polypeptide sequence of any one of SEQ ID NOS: 1, 5, 9, 13, 17, 21, 25, 29, 33, 37, 41, 45, 49, 53, 57, 61, 65, 69, 73, 77, 81, 85, or 89.

3. An IL2Rg binding molecule that specifically binds to the extracellular domain of IL2Rg, wherein the IL2Rg binding molecule comprises a single domain antibody (sdAb), and wherein the sdAb comprises a complementary determining region 1 (CDR1), a CDR2, and a CDR3 as shown in a row of the table below:

CDR1

CDR1

CDR2

CDR2

CDR3

CDR3

AA Seq

SEQ ID

AA Seq

SEQ ID

AA Seq

SEQ ID

STYANYLMG

121

AIYSGGGSTYYADSVKG

122

ASAVKGDKGDIVVVVTGTQRMEYDY

123

FTFDESVMS

125

IISSDDNTYYDDSVKG

126

RRRRPVYDSDYELRPRPLCGDFGV

127

LPFDEDDMG

129

SISSDGTAYYADSVKG

130

GVHRQFGGSSSCGDAFYGMDY

131

DVYGRNSMA

133

VGYSVVTTTYYADSVKG

134

DGNLWRGLRPSEYTY

135

FPYSRYCMG

137

AIEPDGSTSYADSVKG

138

DERCFYLKDYDLRRPAQYRY

139

FTFDESDMG

141

VITSDDNPYYDDSVKG

142

RSRQPVYSRDYELRPRPLCGDFGV

143

FTFDDFDMG

145

TISDDGSTYYADSVKG

146

EGALGSKTNCGWVGNFGY

147

FTFDDFDMG

149

TISDDGSTYYADSVKG

150

EGALGSKTNCGWVGNFGY

151

FTFDDFDMG

153

TISDDGSTYYADSVKG

154

EGALGSKTNCGWVGNFGY

155

FTFSDRDMG

157

TISDDGSTYYADSVKG

158

EGALGSKTNCGWVGNFGY

159

YGYNYIG

161

VIYIGGGDTYYADSVKG

162

RYCVGSVYACLRGGHDEYAH

163

YGYNYIG

165

VIYTGGGDTYYADSVKG

166

RYCVGSVYACLRGGHDEYAH

167

FTFDDFDMG

169

TISDDGSTYYANSVKG

170

EGALGSKTNCGWVGNFGY

171

FTFDDFDMG

173

TISDDGSTYYADSVKG

174

EGALGSKMNCGWVGNFGY

 175.

4. The IL2Rg binding molecule of claim 3 , wherein the sdAb has at least 95% amino acid sequence identity to a polypeptide sequence of any one of SEQ ID NOS: 116, 120, 124, 128, 132, 136, 140, 144, 148, 152, 156, 160, 164 168, or 172.

5. The IL2Rg binding molecule of claim 1 , wherein the sdAb is humanized or otherwise comprises CDRs grafted onto a heterologous framework.

6. The IL2Rg binding molecule of claim 1 , further comprising one or more of a labeling agent, an imaging agent, and a therapeutic agent.

7. A method for isolating, depleting, or enriching IL2Rg+ cells in a biological sample, comprising contacting the biological sample with the IL2Rg binding molecule of claim 1 .

8. A nucleic acid sequence encoding the IL2Rg binding molecule of claim 1 .

9. A recombinant viral or non-viral vector comprising a nucleic acid of claim 8 .

10. A host cell comprising a nucleic acid of claim 8 .

11. A pharmaceutical formulations comprising the viral or non-viral vector of claim 9 .

12. A kit comprising the IL2Rg binding molecule of claim 1 .

13. The IL2Rg binding molecule of claim 1 , wherein the sdAb comprises the CDR1, the CDR2, and the CDR3 of SEQ ID NOS:86, 87, and 88, respectively.

14. The IL2Rg binding molecule of claim 13 , wherein the sdAb has at least 95% amino acid sequence identity to a polypeptide sequence of SEQ ID NO:85.

15. The IL2Rg binding molecule of claim 1 , wherein the sdAb comprises the CDR1, the CDR2, and the CDR3 of SEQ ID NOS:74, 75, and 76, respectively.

16. The IL2Rg binding molecule of claim 15 , wherein the sdAb has at least 95% amino acid sequence identity to a polypeptide sequence of SEQ ID NO:73.

17. The IL2Rg binding molecule of claim 1 , wherein the sdAb comprises the CDR1, the CDR2, and the CDR3 of SEQ ID NOS:78, 79, and 80, respectively.

18. The IL2Rg binding molecule of claim 17 , wherein the sdAb has at least 95% amino acid sequence identity to a polypeptide sequence of SEQ ID NO:77.

19. The nucleic acid sequence of claim 8 , encoding the IL2Rg binding molecule comprising the sdAb having the CDR1, the CDR2, and the CDR3 of SEQ ID NOS:86, 87, and 88, respectively.

20. The nucleic acid sequence of claim 8 , encoding the IL2Rg binding molecule comprising the sdAb having the CDR1, the CDR2, and the CDR3 of SEQ ID NOS:74, 75, and 76, respectively.

21. The nucleic acid sequence of claim 8 , encoding the IL2Rg binding molecule comprising the sdAb having the CDR1, the CDR2, and the CDR3 of SEQ ID NOS:78, 79, and 80, respectively.

22. The IL2Rg binding molecule of claim 1 , wherein the sdAb is linked to a second binding molecule that specifically binds to the extracellular domain of a second cell surface molecule.

Assignments (2)
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE NAME FROM INC., SYNTHEKINE TO SYNTHEKINE, INC PREVIOUSLY RECORDED AT REEL: 062954 FRAME: 0159. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Nov 28, 2023
From: KASTELEIN, ROBERT; ROKKAM, DEEPTI; LUPARDUS, PATRICK J.; VIVONA, SANDRO
To: SYNTHEKINE, INC.
Reel/Frame 065693/0406 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 12, 2023
From: KASTELEIN, ROBERT; ROKKAM, DEEPTI; LUPARDUS, PATRICK J.; VIVONA, SANDRO
To: INC., SYNTHEKINE
Reel/Frame 062954/0159 →
Continuity (6)
Provisional Application 63136098 · Jan 11, 2021
Provisional Application 63135884 · Jan 11, 2021
Provisional Application 63136095 · Jan 11, 2021
Provisional Application 63078745 · Sep 15, 2020
Provisional Application 63061562 · Aug 5, 2020
Related Publication 20230272089A1 · Aug 31, 2023
Cited By (1)
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