IP Library Granted Patent US 12,084,438
Granted Patent B2
US 12,084,438 · App. 16/907,622 · Granted Sep 10, 2024

GCN2 inhibitors and uses thereof

Inventors: Matthew Bleich (Brighton, MA); Jean-Damien Charrier (Wantage, GB); Huijun Dong (Arlington, MA); Steven Durrant (Abingdon, GB); Meredith Suzanne Eno (Brighton, MA); Gorka Etxebarria I Jardi (Abingdon, GB); Simon Everitt (Abingdon, GB); Damien Fraysse (Abingdon, GB); Ronald Knegtel (Abingdon, GB); Igor Mochalkin (Westford, MA); Kiri North (Abingdon, GB); Filippos Porichis (Melrose, MA); Hui Qiu (Acton, MA); Robert Pullin (Abingdon, GB); Pierre-Henri Storck (Abingdon, GB); Heather Clare Twin (Abingdon, GB); Yufang Xiao (Lexington, MA)
Assignees: Merck Patent GmbH; Vertex Pharmaceuticals Incorporated
C07D471/04C07D519/00A61P35/00
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,084,438
App. No.
16/907,622
Granted
Sep 10, 2024
Kind
B2
Abstract

The present invention provides compounds, compositions thereof, and methods of using the same.

Claims (51)

1. A compound of formula I:

or a pharmaceutically acceptable salt thereof, wherein:

Ring A is selected from a 4-8 membered saturated or partially unsaturated monocyclic carbocyclic ring, phenyl, an 8-10 membered bicyclic aromatic carbocyclic ring, a 4-8 membered partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur optionally fused to a 5-6 membered aromatic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 7-12 membered partially unsaturated spirocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 7-12 membered partially unsaturated bicyclic heterocyclic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 7-12 membered partially unsaturated bridged bicyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, an 8-10 membered bicyclic heteroaromatic ring having 1-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or

Het, wherein Het is a 5-8 membered saturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 7-12 membered saturated spirocyclic heterocyclic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 7-12 membered saturated bicyclic heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or a 7-12 membered saturated bridged bicyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur;

Ring B is

each R is independently hydrogen or an optionally substituted group selected from C 1-6 aliphatic, a 3-8 membered saturated or partially unsaturated monocyclic carbocyclic ring, phenyl, an 8-10 membered bicyclic aromatic carbocyclic ring, a 4-8 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 5-6 membered monocyclic heteroaromatic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-10 membered bicyclic heteroaromatic ring having 1-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur; or

two R groups are optionally taken together to form a bivalent C 2-4 alkylene chain;

two R groups are optionally taken together with their intervening atoms to form an optionally substituted 3-7 membered saturated or partially unsaturated monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen or sulfur;

each R′ is independently hydrogen or a C 1-3 aliphatic group optionally substituted with halogen;

each of R 1 is independently hydrogen, halogen, —NO 2 , —C(O)R, —C(O)NRS(O) 2 R, —C(O)N═S(O)R 2 , —NR 2 , —NRC(O)R, —NRC(O)NR 2 , —NRC(O)OR, —NRS(O) 2 R, —NRS(O) 2 NR 2 , —OR, —ON(R)SO 2 R, —P(O)R 2 , —SR, —S(O)R, —S(O) 2 R, —S(O)(NH)R, —S(O) 2 N(R) 2 , —S(NH 2 ) 2 (O)OH,—N═S(O)R 2 , —CH 3 , —CH 2 OH, —CH 2 NHSO 2 CH 3 , —CD 3 , or —CD 2 NRS(O) 2 R, or

each R 1 is independently hydrogen or an optionally substituted group selected from C 1-6 aliphatic, a 3-8 membered saturated or partially unsaturated monocyclic carbocyclic ring, phenyl, an 8-10 membered bicyclic aromatic carbocyclic ring, a 4-8 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-10 membered bicyclic heteroaromatic ring having 1-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur; or

two R 1 groups are optionally taken together with their intervening atoms to form an optionally substituted 3-7 membered saturated or partially unsaturated monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen or sulfur; or

two R 1 groups are optionally taken together to form —O or ═NH; or

two R 1 groups are optionally taken together to form a bivalent C 2-4 alkylene chain;

each of R 2 is independently hydrogen, halogen, —C(O)N(R′) 2 , —OR′, —N(R′) 2 , —S(O) 2 R, —S(O) 2 N(R) 2 , —O— phenyl, or an optionally substituted group selected from C 1-3 aliphatic, phenyl, 5-6 membered monocyclic heteroaromatic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or 4-8 membered saturated monocyclic heterocycle having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;

R 3 is hydrogen, halogen, —CN, —OR′, —N(R′) 2 , or an optionally substituted group selected from C 1-3 aliphatic, or a 5 membered monocyclic heteroaromatic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur;

R 4 is hydrogen, halogen, —CN, —OR, or an optionally substituted group selected from C 1-3 aliphatic, a 4-8 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or a 7-12 membered saturated or partially unsaturated spirocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur;

m is 0, 1, 2, 3, 4 or 5;

n is 0, 1, or 2;

p is 0 or 1; and

q is 0 or 1.

2. The compound of claim 1 , wherein Ring A is Het.

3. The compound of claim 2 , wherein Het is a 5-8 membered saturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, a 7-12 membered saturated spirocyclic heterocyclic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or a 7-12 membered saturated bicyclic heterocyclic ring having 1-3 heteroatoms independently selected from nitrogen, oxygen, or sulfur.

4. The compound of claim 1 , wherein each of R 1 is independently hydrogen, halogen, —C(O)R, —C(O)NRS(O) 2 R, —C(O)N═S(O)R 2 , —NR 2 , —NRC(O)R, —NRC(O)NR 2 , —NRC(O)OR, —NRS(O) 2 R, —NRS(O) 2 NR 2 , —OR, —ON(R)SO 2 R, —P(O)R 2 , —SR, —S(O)R, —S(O) 2 R, —S(O)(NH)R, —S(O) 2 N(R) 2 , —S(NH 2 ) 2 (O)OH, —N═S(O)R 2 , —CH 3 , —CH 2 OH, —CH 2 NHSO 2 CH 3 , —CD 3 , or —CD 2 NRS(O) 2 R, or each R 1 is independently hydrogen or an optionally substituted group selected from C 1-6 aliphatic, a 3-8 membered saturated or partially unsaturated monocyclic carbocyclic ring, phenyl, an 8-10 membered bicyclic aromatic carbocyclic ring, a 4-8 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or an 8-10 membered bicyclic heteroaromatic ring having 1-5 heteroatoms independently selected from nitrogen, oxygen, or sulfur; or

two R 1 groups are optionally taken together to form a bivalent C 2-4 alkylene chain; or

two R 1 groups are optionally taken together with their intervening atoms to form an optionally substituted 3-7 membered saturated or partially unsaturated monocyclic ring having 0-4 heteroatoms independently selected from nitrogen, oxygen or sulfur.

5. The compound of claim 1 , wherein each of R 2 is independently hydrogen, halogen, —C(O)N(R′) 2 , —OR′, —N(R′) 2 , or an optionally substituted group selected from C 1-3 aliphatic, or a 5-6 membered monocyclic heteroaromatic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.

6. The compound of claim 1 , wherein R 3 is hydrogen, halogen, —CN, —OR′, —N(R′) 2 , or an optionally substituted group selected from C 1-3 aliphatic, or a 5 membered monocyclic heteroaromatic ring having 1-4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.

7. The compound of claim 1 , wherein R 4 is hydrogen, halogen, —CN, —OR, or an optionally substituted group selected from C 1-3 aliphatic, a 4-8 membered saturated or partially unsaturated monocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or a 7-12 membered saturated or partially unsaturated spirocyclic heterocyclic ring having 1-2 heteroatoms independently selected from nitrogen, oxygen, or sulfur.

8. The compound of claim 1 , which is a compound of one of formulae IV-a, IV-b, or IV-c:

or a pharmaceutically acceptable salt thereof.

9. The compound of claim 1 , which is a compound of one of formulae XIII-a, XIII-b, or XIII-c:

or a pharmaceutically acceptable salt thereof.

10. The compound of claim 1 , which is a compound of one of formulae XIV-a, XIV-b, or XIV-c:

or a pharmaceutically acceptable salt thereof.

11. The compound of claim 1 , which is a compound of one of formulae XV-a, XV-b, or XV-c:

or a pharmaceutically acceptable salt thereof.

12. The compound of claim 1 , wherein m is 1, 2, 3, 4 or 5.

13. A pharmaceutical composition comprising the compound according to claim 1 , or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier, adjuvant, or vehicle.

14. The compound of claim 1 , wherein Ring A is

15. The compound of claim 1 , wherein Ring A is

16. The compound of claim 1 , wherein Ring A is

17. The compound of claim 1 , wherein R 1 is

18. The compound of claim 1 , wherein R 1 is

19. The compound of claim 1 , wherein R 1 is

20. The compound of claim 1 , wherein R 1 is

21. The compound of claim 1 , wherein R 2 is fluoro, chloro, bromo, methyl, ethyl, —CF 3 ,

22. The compound of claim 1 , wherein R 4 is fluoro, chloro, methyl, —CF 3 , —OH,

23. The compound of claim 1 , wherein n is 1.

24. The compound of claim 1 , wherein p is 0.

25. The compound of claim 1 , wherein q is 0.

Assignments (4)
CORRECTIVE ASSIGNMENT TO CORRECT THE DOC DATE OF ASSIGNOR MATTHEW BLEICH FROM 03/01/2019 TO 03/06/2019 AND THE DOCKET NUMBER FROM 394927-019USD1 (174701) TO 394927-019USC1 (174701) PREVIOUSLY RECORDED ON REEL 53008 FRAME 459. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Jul 3, 2024
From: BLEICH, MATTHEW; DONG, HUIJUN; ENO, MEREDITH SUZANNE; MOCHALKIN, IGOR; PORICHIS, FILIPPOS; QIU, HUI; XIAO, YUFANG
To: MERCK PATENT GMBH
Reel/Frame 068106/0992 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 23, 2020
From: VERTEX PHARMACEUTICALS (EUROPE) LIMITED
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 053008/0343 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 23, 2020
From: CHARRIER, JEAN-DAMIEN; DURRANT, STEVEN; JARDI, GORKA ETXEBARRIA I; EVERITT, SIMON; FRAYSSE, DAMIEN; KNEGTEL, RONALD; NORTH, KIRI; PULLIN, ROBERT; STORCK, PIERRE-HENRI; TWIN, HEATHER CLARE
To: VERTEX PHARMACEUTICALS (EUROPE) LIMITED
Reel/Frame 053008/0408 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 23, 2020
From: BLEICH, MATTHEW; DONG, HUIJUN; ENO, MEREDITH SUZANNE; MOCHALKIN, IGOR; PORICHIS, FILIPPOS; QIU, HUI; XIAO, YUFANG
To: MERCK PATENT GMBH
Reel/Frame 053008/0459 →
Continuity (3)
Continuation 16260019 · Jan 28, 2019
Provisional Application 62623312 · Jan 29, 2018
Related Publication 20210040083A1 · Feb 11, 2021