Patient-specific cortical surface tessellation into dipole patches
A method ( 26 ) that tessellates a cortical surface of a brain with a plurality of dipole patches, wherein a quantity of the plurality of dipole patches is variable and dependent upon a head size.
1. A method, comprising:
receiving magnetic resonance imaging data;
segmenting the magnetic resonance imaging data, the segmenting comprising tissue segmentation of a cortical surface of a cortex;
tessellating the segmented cortical surface with a plurality of dipole patches, wherein a quantity of the plurality of dipole patches is variable and dependent upon a head size;
receiving a volumetric bitmask of the cortex, wherein each voxel of a plurality of voxels is labeled according to a tissue type;
providing a triangular mesh representation of the segmented cortical surface based on the volumetric bitmask; and
providing, for display, an image of a head or a portion thereof according to the tessellation.
2. The method of the claim 1 , wherein the cortical surface consists of a gray matter surface of the cortex.
3. A non-transitory computer readable medium including instructions that when executed by one or more processors cause the one or more processors to perform the method of claim 2 .
4. The method of claim 1 , further comprising:
providing a high resolution triangular mesh containing triangles with uniform edge length by re-meshing the triangular mesh representation; and
providing a simplified triangular mesh representation by applying a topology preserving, mesh decimation algorithm to the high resolution triangular mesh representation.
5. The method of claim 4 , wherein the topology preserving, mesh decimation algorithm preserves cortical folding and geometry of the segmented cortex.
6. The method of claim 4 , further comprising obtaining the plurality of dipole patches by:
associating each triangle from the high resolution triangular mesh representation to its closest triangle from the simplified triangular mesh representation, wherein a final quantity of the plurality of dipole patches equals a quantity of triangles of the simplified triangular mesh representation.
7. The method of claim 4 , wherein each dipole patch center is determined by:
determining a center of mass of all triangles of the high resolution triangular mesh representation associated with a particular one of the closest triangles, wherein a center of a high resolution mesh triangle closest to the center of mass is selected as the dipole patch center;
wherein a normal of the dipole patch corresponds to an average of all normals of the triangles of the high resolution triangular mesh representation.
8. A non-transitory computer readable medium including instructions that when executed by one or more processors cause the one or more processors to perform the method of claim 4 .
9. The method of claim 1 , wherein the triangular mesh representation of the segmented cortical surface is based on application of a marching cubes algorithm to the bitmask.
10. The method of claim 1 , wherein each of the plurality of dipole patches comprises properties that are used as boundary conditions in a forward model used in electrical source imaging.
11. The method of claim 1 , wherein the properties include a patch center, a patch normal, and surface triangles associated with each of the plurality of dipole patches.
12. The method of claim 1 , further comprising:
registering electrode positions on the head;
predicting electrical activity of the head based on the tessellated image;
recording electroencephalography signals from the head; and
based on the recording, predicting a source of targeted brain activity.
13. The method of claim 1 , further comprising displaying the image of the head or the portion thereof according to the tessellation, where the displayed image further comprises a visual representation of one or any combination of a patch center, a patch normal, or a cortical source.
14. A non-transitory computer readable medium including instructions that when executed by one or more processors cause the one or more processors to perform the method of claim 1 .
15. An apparatus, comprising:
a memory comprising instructions; and
one or more processors that, when the one or more processors execute the instructions, are caused to:
receive magnetic resonance imaging data;
segment the magnetic resonance imaging data, the segmenting comprising tissue segmentation of a cortical surface of a cortex;
tessellate the segmented cortical surface with a plurality of dipole patches, wherein a quantity of the plurality of dipole patches is variable and dependent upon a head size;
provide a triangular mesh representation of the segmented cortical surface based on a volumetric bitmask of the cortex, wherein the volumetric bitmask includes a plurality of voxels labeled according to a tissue type; and
provide, for display, an image of a head or a portion thereof according to the tessellation.
16. A system comprising the apparatus of claim 15 , and further comprising:
a magnetic resonance imaging system configured to scan a head of the subject and provide the magnetic resonance imaging data to the one or more processors of the apparatus;
a plurality of electroencephalography electrodes configured to sense the electroencephalography signals;
wherein the one or more processors of the apparatus are configured to receive the electroencephalography signals measured by the electroencephalography electrodes positioned on a scalp of a subject.
17. The system of claim 16 , further comprising a display device coupled to the apparatus, the display device configured to display the image of the head or the portion thereof according to the tessellation.
18. The system of claim 17 , where the displayed image further comprises a visual representation of one or any combination of a patch center, a patch normal, or a cortical source.
19. The apparatus of claim 15 , wherein the instructions further cause the one or more processors to receive the volumetric bitmask of the cortex.
20. The apparatus of claim 15 , wherein the instructions further cause the one or more processors to:
provide a high resolution triangular mesh containing triangles with uniform edge length by re-meshing the triangular mesh representation; and
provide a simplified triangular mesh representation by applying a topology preserving, mesh decimation algorithm to the high resolution triangular mesh representation.