IP Library › Granted Patent US 12,269,831
Granted Patent B2
US 12,269,831 · App. 17/395,838 · Granted Apr 8, 2025

Modulators of cystic fibrosis transmembrane conductance regulator

Inventors: Jeremy J. Clemens (San Diego, CA); Brett C. Bookser (San Diego, CA); Thomas Cleveland (San Marcos, CA); Timothy R. Coon (Carlsbad, CA); Michel Gallant (Pierrefonds, CA); Peter Diederik Jan Grootenhuis (Del Mar, CA); Sara Sabina Hadida Ruah (La Jolla, CA); Julie Laterreur (San Diego, CA); Vito Melillo (Escondido, CA); Mark Thomas Miller (Rancho Santa Fe, CA); Prasuna Paraselli (San Diego, CA); Yeeman K. Ramtohul (Pierrefonds, CA); Thumkunta Jagadeeswar Reddy (Pierrefonds, CA); Claudio Sturino (Ile Bizard, CA); Lino Valdez (San Diego, CA); Jinglan Zhou (San Diego, CA); Minson Baek (San Diego, CA); William Schulz Bechara (Laval, CA)
Assignee: Vertex Pharmaceuticals Incorporated
C07D498/18A61K45/06
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Quick Facts
Patent No.
US 12,269,831
App. No.
17/395,838
Granted
Apr 8, 2025
Kind
B2
Abstract

This disclosure provides modulators of Cystic Fibrosis Transmembrane Conductance Regulator (CFTR), pharmaceutical compositions containing at least one such modulator, methods of treatment of cystic fibrosis using such modulators and pharmaceutical compositions, and processes for making such modulators.

Claims (202)

1. A compound selected from compounds of Formula I:

and deuterated derivatives and pharmaceutically acceptable salts thereof, wherein:

X is selected from —O—, —S—, —SO—, and —SO 2 —;

each Y is independently selected from —C(R Y ) 2 —, —O—, —CO—, and

each R Y is independently selected from hydrogen, halogen, C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from hydroxy and Q), C 3 -C 8 cycloalkyl, C 6 -C 10 aryl, 5- to 10-membered heteroaryl, —OR Y1 , —CO 2 R Y1 , —COR Y1 , —CON(R Y1 ) 2 , and —N(R Y1 ) 2 ; or two instances of R Y on the same atom may be taken together to form a ring selected from C 3 -C 8 cycloalkyl and 3- to 6-membered heterocyclyl; or two instances of R Y , one of which is on a first atom and the second of which is on an adjacent second atom, may be replaced with a pi bond between the first and second atom;

each R Y1 is independently selected from hydrogen and C 1 -C 6 alkyl, or two instances of R Y1 bonded to the same nitrogen taken together form a 3- to 6-membered heterocyclyl;

Ring B is selected from:

C 6 -C 10 aryl (optionally substituted with 1-3 groups independently selected from halogen, C 1 -C 6 alkyl, and C 1 -C 6 alkoxy),

C 3 -C 8 cycloalkyl,

5- to 10-membered heteroaryl, and

3- to 6-membered heterocyclyl (optionally substituted with 1-3 groups independently selected from C 1 -C 6 alkyl);

each Q is independently selected from:

C 1 -C 6 alkyl optionally substituted with 1-3 groups independently selected from:

halogen,

oxo,

C 6 -C 10 aryl (optionally substituted with 1-3 groups independently selected from halogen and —OCF 3 ), and

C 3 -C 8 cycloalkyl,

C 3 -C 8 cycloalkyl optionally substituted with 1-3 groups independently selected from:

halogen,

CN,

C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from halogen, —NH 2 , and —NHCOMe),

C 1 -C 6 alkoxy,

C 6 -C 10 aryl (optionally substituted with 1-3 groups independently selected from C 1 -C 6 alkyl), and

C 3 -C 8 cycloalkyl,

C 6 -C 10 aryl optionally substituted with 1-3 groups independently selected from:

halogen,

CN,

C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from halogen and hydroxy),

C 1 -C 6 alkoxy optionally substituted with 1-4 groups independently selected from:

halogen,

C 3 -C 8 cycloalkyl (optionally substituted with CF 3 ),

C 3 -C 8 cycloalkyl (optionally substituted with 1-3 groups independently selected from halogen, CF 3 , OCF 3 , and C 1 -C 6 alkyl), and

C 6 -C 10 aryl,

5- to 10-membered heteroaryl optionally substituted with 1-3 groups independently selected from:

halogen,

C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from halogen),

C 3 -C 8 cycloalkyl (optionally substituted with 1-3 CF 3 groups), and

3- to 10-membered heterocyclyl,

3- to 10-membered heterocyclyl optionally substituted with 1-3 groups independently selected from:

C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from oxo and C 3 -C 8 cycloalkyl), and

oxo;

each R 1 is independently selected from halogen, C 1 -C 6 alkyl (optionally substituted with 1-6 groups independently selected from halogen and hydroxy), —OR 2 , —N(R 2 ) 2 , —CO 2 R 2 , —CO—N(R 2 ) 2 , —CN, phenyl, benzyl, C 1 -C 6 alkoxy, C 3 -C 8 cycloalkyl, 5- to 6-membered heteroaryl, 3- to 6-membered heterocyclyl, —SO 2 R 2 , —SR 2 , —SOR 2 , —PO(OR 2 ) 2 , and —PO(R 2 ) 2 ;

each R 2 is independently selected from hydrogen, C 1 -C 6 alkyl (optionally substituted with 1-6 groups independently selected from halogen), and C 6 -C 10 aryl (optionally substituted with C 1 -C 6 alkoxy, which is optionally substituted with 1-6 groups independently selected from halogen);

Z is selected from

wherein Ring C is selected from C 6 -C 10 aryl and 5- to 10-membered heteroaryl;

R Z1 is selected from hydrogen, —CN, C 1 -C 6 alkyl (optionally substituted with 1-6 groups independently selected from halogen or 1-3 hydroxy), 3- to 6-membered heterocyclyl, 3- to 6-membered cycloalkyl, 5- to 6-membered aryl, and 5- to 6-membered heteroaryl;

R Z2 is selected from hydrogen, halogen, and hydroxy, or R Z1 and R Z2 taken together form a group selected from oxo and ═N—OH;

each R Z3 is independently selected from hydroxy, C 1 -C 6 alkoxy, C 1 -C 6 alkyl, C 1 -C 6 haloalkyl, and C 6 -C 10 aryl; or two instances of R Z3 are taken together to form a 3- to 6-membered heterocyclyl;

n is selected from 4, 5, 6, 7, and 8; and

m is selected from 0, 1, 2, and 3.

2. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein X is —O—.

3. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each R Y is independently selected from hydrogen, halogen, C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from hydroxy and Q), C 3 -C 8 cycloalkyl, and —OR Y1 .

4. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein —OR Y1 is —OH.

5. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each Q is independently selected from:

C 3 -C 8 cycloalkyl,

C 6 -C 10 aryl optionally substituted with 1-3 groups independently selected from halogen and C 1 -C 6 alkyl.

6. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each Q is independently selected from:

7. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each R Y is independently selected from: hydrogen, fluorine,

8. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein Ring B is selected from C 3 -C 8 cycloalkyl and phenyl optionally substituted with 1-3 groups independently selected from halogen.

9. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein Ring B is selected from:

10. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein n is selected from 4, 5, and 6.

11. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein —(Y) n — is a group selected from:

12. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each R 1 is independently selected from C 1 -C 6 alkyl (optionally substituted with 1-6 groups independently selected from halogen and hydroxy), —N(R 2 ) 2 , and —CO 2 R 2 .

13. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each R 2 is independently selected from hydrogen and C 1 -C 6 alkyl.

14. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each R 1 is independently selected from —CF 3 , —NH 2 , —NH(CH 2 CH 3 ), CO 2 H, and CH 2 OH.

15. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein Z is selected from

16. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein the group:

is selected from:

17. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein the group:

is selected from:

18. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein R Z1 is selected from hydrogen and C 1 -C 6 alkyl (optionally substituted with 1-3 groups selected from halogen).

19. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein R Z1 is selected from hydrogen and —CF 3 .

20. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein R Z2 is hydroxy.

21. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein Z is selected from:

22. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein m is selected from 1 and 2.

23. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein:

X is —O—;

each Y is independently selected from —C(R Y ) 2 —, —O—, and

each R Y is independently selected from hydrogen and C 1 -C 6 alkyl (optionally substituted with 1-3 groups independently selected from hydroxy and Q);

Ring B is selected from C 3 -C 8 cycloalkyl groups:

each Q is independently selected from: C 3 -C 8 cycloalkyl and C 6 -C 10 aryl optionally substituted with 1-3 groups independently selected from halogen and C 1 -C 6 alkyl,

each R 1 is independently selected from C 1 -C 6 alkyl (optionally substituted with 1-6 groups independently selected from halogen) and —NH 2 ;

Z is

R Z1 is selected from C 1 -C 6 alkyl (optionally substituted with 1-6 groups independently selected from halogen);

R Z2 is hydroxy;

n is selected from 5 and 6; and

m is 2.

24. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each Q is independently selected from:

25. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein each R Y is independently selected from: hydrogen,

26. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein Ring B is

27. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein —(Y) n — is a group selected from:

28. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein R Z1 is —CF 3 .

29. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein n is 5.

30. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein n is 6.

31. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 , wherein the compound is selected from:

Comp. No.

Structure

1

2

3

4

5

6

7

8

9

10

11

12

13

14

15

16

17

18

19

20

21

22

23

24

25

26

27

28

29

30

31

32

33

34

35

36

37

38

39

40

41

42

43

44

45

46

47

48

49

50

51

52

53

54

55

56

57

58

59

60

61

62

63

64

65

66

67

68

69

70

71

72

73

74

75

76

77

pharmaceutically acceptable salts thereof, and deuterated derivatives of any of the foregoing.

32. The compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 31 , wherein the compound is selected from:

Comp. No.

Structure

5

11

14

36

37

47

49

50

52

59

61

63

64

pharmaceutically acceptable salts thereof, and deuterated derivatives of any of the foregoing.

33. A pharmaceutical composition comprising a compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 and a pharmaceutically acceptable carrier.

34. The pharmaceutical composition according to claim 33 , further comprising one or more additional therapeutic agent(s).

35. A method of treating cystic fibrosis, comprising administering an effective amount of the compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 1 .

36. The method according to claim 35 , further comprising administering one or more additional therapeutic agent(s).

37. A compound of the formula:

a deuterated derivative thereof, or a pharmaceutically acceptable salt of any of the foregoing.

38. A pharmaceutical composition comprising the compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 37 , and a pharmaceutically acceptable carrier.

39. The pharmaceutical composition according to claim 38 , further comprising one or more additional therapeutic agent(s).

40. A method of treating cystic fibrosis, comprising administering an effective amount of the compound, deuterated derivative, or pharmaceutically acceptable salt according to claim 37 .

41. The method according to claim 40 , further comprising administering one or more additional therapeutic agent(s).

Assignments (13)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 23, 2023
From: VALDEZ, LINO
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062778/0593 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: VERTEX PHARMACEUTICALS (CANADA) INCORPORATED
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062771/0532 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: GALLANT, MICHEL
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062771/0568 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: CLEVELAND, THOMAS; COON, TIMOTHY R.; HADIDA RUAH, SARA SABINA; MILLER, MARK THOMAS; ZHOU, JINGLAN
To: VERTEX PHARMACEUTICALS (SAN DIEGO) LLC
Reel/Frame 062771/0604 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: GROOTENHUIS, PETER
To: VERTEX PHARMACEUTICALS (SAN DIEGO) LLC
Reel/Frame 062771/0623 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: CLEMENS, JEREMY J.
To: VERTEX PHARMACEUTICALS (SAN DIEGO) LLC
Reel/Frame 062771/0667 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: VERTEX PHARMACEUTICALS (SAN DIEGO) LLC
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062771/0514 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: RAMTOHUL, YEEMAN K.
To: VERTEX PHARMACEUTICALS (CANADA) INCORPORATED
Reel/Frame 062771/0710 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: STURINO, CLAUDIO
To: VERTEX PHARMACEUTICALS (CANADA) INCORPORATED
Reel/Frame 062771/0739 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: REDDY, THUMKUNTA JAGADEESWAR
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062771/0764 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: BOOKSER, BRETT C.
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062771/0775 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: MELILLO, VITO; PARASELLI, PRASUNA
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 062771/0792 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 22, 2023
From: LATERREUR, JULIE
To: VERTEX PHARMACEUTICALS (CANADA) INCORPORATED
Reel/Frame 062771/0685 →
Continuity (2)
Provisional Application 63063194 · Aug 7, 2020
Related Publication 20220041621A1 · Feb 10, 2022
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