IP Library › Granted Patent US 12,358,905
Granted Patent B2
US 12,358,905 · App. 17/614,969 · Granted Jul 15, 2025

Methods for making thiazolypyrazole carboxylic acids and intermediates therefor

Inventors: Alan Cooper (Kenilworth, NJ); Paul O'Shea (Princeton, NJ); Narayanan Anantha (Greensboro, NC)
Assignee: Bantam Pharamceutical, LLC
C07D417/04
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Quick Facts
Patent No.
US 12,358,905
App. No.
17/614,969
Granted
Jul 15, 2025
Kind
B2
Abstract

This disclosure relates generally to improved methods of preparing pyrazolylthiazole-containing compounds and their intermediates.

Claims (123)

1. A method for preparing a halopyrazolylthiazole of formula (Ia)

wherein

X is a halogen;

L 1 is selected from the group consisting of a bond, —C(O)—, —S—, —S(O) 1-2 —, —O—, —NR 6 —, —C(O)NR 6 —, —NR 6 C(O)—, —C(S)NR 6 —, —NR 6 C(S)—, —C(O)O—, —OC(O)—, —C(O)S—, —SC(O)—, —C(S)O—, —OC(S)—, —C(S)S—, —SC(S)—, —S(O) 1-2 O—, —OS(O) 1-2 —, —S(O) 1-2 NR 6 — and —NR 6 S(O) 1-2 —;

R 1 is selected from the group consisting of C 1 -C 8 alkyl, C 1 -C 8 alkenyl and C 1 -C 8 alkynyl, each unsubstituted or fluorinated;

Q 1 is selected from the group consisting of —C(O)OR 2C , —C(O)NR 2B R 2C , —C(O)NR 2B S(O) 2 R 2C , —C(O)NR 2B S(O) 2 NR 2B R 2C , —S(O) 2 R 2C , —N(R 2B )S(O) 2 R 2C , —S(O) 2 NR 2B R 2C , and —C(O)NH—O(C 1 -C 3 alkyl), in which

each R 2B is independently selected from H and C 1 -C 3 alkyl, and

each R 2C is independently selected from C 1 -C 3 alkyl and a protecting group;

R 3 is phenyl or heteroaryl each (i) optionally substituted with a single substituent selected from -L 3C -(phenyl optionally substituted with 1-5 R 3D ), -L 3C -(heteroaryl optionally substituted with 1-5 R 3D ), -L 3C -(cycloalkyl optionally substituted with 1-5 R 3D ), -L 3C -(heterocycloalkyl optionally substituted with 1-5 R 3D ) and (ii) optionally substituted with 1-5 R 3E ,

in which

each L 3C is a bond, methylene, ethylene, —C(O)—, —S—, —S(O) 1-2 —, —O—, or —NR 3G —;

each R 3D is independently selected from oxo optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 3F , —SR 3F , —S(O) 1-2 R 3F , —OR 3F , —NR 3G R 3F , —C(O)R 3F , —C(O)NR 3G R 3F , —NR 3G C(O)R 3F , —C(S)NR 3G R 3F , —NR 3G C(S)R 3F , —C(O)OR 3F , —OC(O)R 3F , —C(O)SR 3F , —SC(O)R 3F , —C(S)OR 3F , —OC(S)R 3F , —C(S)SR 3F , —SC(S)R 3F , —S(O) 1-2 OR 3F , —OS(O) 1-2 R 3F , —S(O) 1-2 NR 3G R 3F , and —NR 3G S(O) 1-2 R 3F ;

each R 3E is independently selected from oxo, optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 3F , —SR 3F , —S(O) 1-2 R 3F , —OR 3F , —NR 3G R 3F , —C(O)R 3F , —C(O)NR 3G R 3F , —NR 3G C(O)R 3F , —C(S)NR 3G R 3F , —NR 3G C(S)R 3F , —C(O)OR 3F , —OC(O)R 3F , —C(O)SR 3F , —SC(O)R 3F , —C(S)OR 3F , —OC(S)R 3F , —C(S)SR 3F , —SC(S)R 3F , —S(O) 1-2 OR 3F , —OS(O) 1-2 R 3F , —S(O) 1-2 NR 3G R 3F , and —NR 3G S(O) 1-2 R 3F ;

each R 3F is independently selected from H, C 1 -C 3 alkyl and C 1 -C 3 fluoroalkyl and

each R 3G is independently selected from H, C 1 -C 3 alkyl, and C 1 -C 3 fluoroalkyl; and

R 4 is selected from the group consisting of hydrogen, optionally substituted C 1 -C 8 alkyl, optionally-substituted C 1 -C 8 alkenyl and optionally substituted C 1 -C 8 alkynyl;

wherein

each R 6 is selected from the group consisting of hydrogen, C 1 -C 3 alkyl and —C(O)(C 1 -C 3 alkyl);

each optionally substituted alkyl, alkenyl and alkynyl is unsubstituted, fluorinated or substituted with one or two hydroxyl groups;

each cycloalkyl has 3-10 ring carbons and is saturated or partially unsaturated;

each heterocylcloalkyl has 3-10 ring members and 1-3 heteroatoms independently selected from nitrogen, oxygen and sulfur, and is saturated or partially unsaturated; and

each heteroaryl is a 5-6 membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen and sulfur,

the method comprising:

reacting a thiazolylhydrazine of formula (Ib)

wherein X, R 1 , and L 1 are as described for formula (Ia),

with a dione of formula (II)

wherein R 3 and R 4 are as described for formula (Ia),

optionally in a solvent, under conditions sufficient to form a hydrazone; and

contacting the hydrazone with an compound of formula X 1 —CH 2 -Q 1 wherein Q 1 is as described for formula (Ia), and X 1 is a halogen or a leaving group, to obtain the halopyrazolylthiazole of formula (Ia).

2. The method of claim 1 , wherein the hydrazone and the alkylhalogenide are reacted in presence of an inorganic iodide and a base.

3. The method of claim 2 , wherein the inorganic iodide is KI or NaI.

4. The method of claim 2 , wherein the amount of inorganic iodide at least 1 molar equivalent based on the amount of the thiazole.

5. The method of claim 2 , wherein the base is a carbonate.

6. A halopyrazolylthiazole of formula (Ia)

wherein

X is a halogen;

L 1 is selected from the group consisting of a bond, —C(O)—, —S—, —S(O) 1-2 —, —O—, —NR 6 —, —C(O)NR 6 —, —NR 6 C(O)—, —C(S)NR 6 —, —NR 6 C(S)—, —C(O)O—, —OC(O)—, —C(O)S—, —SC(O)—, —C(S)O—, —OC(S)—, —C(S)S—, —SC(S)—, —S(O) 1-2 O—, —OS(O) 1-2 —, —S(O) 1-2 NR 6 — and —NR 6 S(O) 1-2 —;

R 1 is selected from the group consisting of C 1 -C 8 alkyl, C 1 -C 8 alkenyl and C 1 -C 8 alkynyl, each unsubstituted or fluorinated;

Q 1 is selected from the group consisting of —C(O)OR 2C , —C(O)NR 2B R 2C , —C(O)NR 2B S(O) 2 R 2C , —C(O)NR 2B S(O) 2 NR 2B R 2C , —S(O) 2 R 2C , —N(R 2B )S(O) 2 R 2C , —S(O) 2 NR 2B R 2C , and —C(O)NH—O(C 1 -C 3 alkyl), in which

each R 2B is independently selected from H and C 1 -C 3 alkyl, and

each R 2C is independently selected from C 1 -C 3 alkyl and a protecting group;

R 3 is phenyl or heteroaryl each (i) optionally substituted with a single substituent selected from -L 3C -(phenyl optionally substituted with 1-5 R 3D ), -L 3C -(heteroaryl optionally substituted with 1-5 R 3D ), -L 3C -(cycloalkyl optionally substituted with 1-5 R 3D ), -L 3C -(heterocycloalkyl optionally substituted with 1-5 R 3D ) and (ii) optionally substituted with 1-5 R 3E ,

in which

each L 3C is a bond, methylene, ethylene, —C(O)—, —S—, —S(O) 1-2 —, —O—, or —NR 3G —;

each R 3D is independently selected from oxo optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 3F , —SR 3F , —S(O) 1-2 R 3F , —OR 3F , —NR 3G R 3F , —C(O)R 3F , —C(O)NR 3G R 3F , —NR 3G C(O)R 3F , —C(S)NR 3G R 3F , —NR 3G C(S)R 3F , —C(O)OR 3F , —OC(O)R 3F , —C(O)SR 3F , —SC(O)R 3F , —C(S)OR 3F , —OC(S)R 3F , —C(S)SR 3F , —SC(S)R 3F , —S(O) 1-2 OR 3F , —OS(O) 1-2 R 3F , —S(O) 1-2 NR 3G R 3F , and —NR 3G S(O) 1-2 R 3F ;

each R 3E is independently selected from oxo, optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 3F , —SR 3F , —S(O) 1-2 R 3F , —OR 3F , —NR 3G R 3F , —C(O)R 3F , —C(O)NR 3G R 3F , —NR 3G C(O)R 3F , —C(S)NR 3G R 3F , —NR 3G C(S)R 3F , —C(O)OR 3F , —OC(O)R 3F , —C(O)SR 3F , —SC(O)R 3F , —C(S)OR 3F , —OC(S)R 3F , —C(S)SR 3F , —SC(S)R 3F , —S(O) 1-2 OR 3F , —OS(O) 1-2 R 3F , —S(O) 1-2 NR 3G R 3F , and —NR 3G S(O) 1-2 R 3F ;

each R 3F is independently selected from H, C 1 -C 3 alkyl and C 1 -C 3 fluoroalkyl and

each R 3G is independently selected from H, C 1 -C 3 alkyl, and C 1 -C 3 fluoroalkyl; and

R 4 is selected from the group consisting of hydrogen, optionally substituted C 1 -C 8 alkyl,

optionally-substituted C 1 -C 8 alkenyl and optionally substituted C 1 -C 8 alkynyl;

wherein

each R 6 is selected from the group consisting of hydrogen, C 1 -C 3 alkyl and —C(O)(C 1 -C 3 alkyl);

each optionally substituted alkyl, alkenyl and alkynyl is unsubstituted, fluorinated or substituted with one or two hydroxyl groups;

each cycloalkyl has 3-10 ring carbons and is saturated or partially unsaturated;

each heterocylcloalkyl has 3-10 ring members and 1-3 heteroatoms independently selected from nitrogen, oxygen and sulfur, and is saturated or partially unsaturated; and

each heteroaryl is a 5-6 membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen and sulfur.

7. The compound of claim 6 , wherein X is Cl or Br.

8. The compound of claim 6 , wherein the halopyrazolylthiazole of formula (Ia) is C 1 -C 3 alkyl 1-(4-halo-5-(isopropylthio)thiazol-2-yl)-4-(3-fluorophenyl)-3-methyl-1H-pyrazole-5-carboxylate.

9. A method for preparing a compound of formula (I)

optionally in the form of a pharmaceutically acceptable salt or N-oxide, and/or a solvate or hydrate, wherein

L 1 is selected from the group consisting of a bond, —C(O)—, —S—, —S(O) 1-2 —, —O—, —NR 6 —, —C(O)NR 6 —, —NR 6 C(O)—, —C(S)NR 6 —, —NR 6 C(S)—, —C(O)O—, —OC(O)—, —C(O)S—, —SC(O)—, —C(S)O—, —OC(S)—, —C(S)S—, —SC(S)—, —S(O) 1-2 O—, —OS(O) 1-2 —, —S(O) 1-2 NR 6 — and —NR 6 S(O) 1-2 —;

R 1 is selected from the group consisting of C 1 -C 8 alkyl, C 1 -C 8 alkenyl and C 1 -C 8 alkynyl, each unsubstituted or fluorinated;

Q is selected from the group consisting of —C(O)OR 2A , —C(O)NR 2B R 2A , —C(O)NR 2B S(O) 2 R 2A , —C(O)NR 2B S(O) 2 NR 2B R 2A , —S(O) 2 R 2A , —N(R 2B )S(O) 2 R 2A , —S(O) 2 NR 2B R 2A , and —C(O)NH—O(C 1 -C 3 alkyl), in which

each R 2A is independently selected from H, C 1 -C 3 alkyl, and a protecting group, and

each R 2B is independently selected from H and C 1 -C 3 alkyl;

R 3 is phenyl or heteroaryl each (i) optionally substituted with a single substituent selected from -L 3C -(phenyl optionally substituted with 1-5 R 3D ), -L 3C -(heteroaryl optionally substituted with 1-5 R 3D ), -L 3C -(cycloalkyl optionally substituted with 1-5 R 3D ), -L 3C -(heterocycloalkyl optionally substituted with 1-5 R 3D ) and (ii) optionally substituted with 1-5 R 3E ,

in which

each L 3C is a bond, methylene, ethylene, —C(O)—, —S—, —S(O) 1-2 —, —O—, or —NR 3G —;

each R 3D is independently selected from oxo optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 3F , —SR 3F , —S(O) 1-2 R 3F , —OR 3F , —NR 3G R 3F , —C(O)R 3F , —C(O)NR 3G R 3F , —NR 3G C(O)R 3F , —C(S)NR 3G R 3F , —NR 3G C(S)R 3F , —C(O)OR 3F , —OC(O)R 3F , —C(O)SR 3F , —SC(O)R 3F , —C(S)OR 3F , —OC(S)R 3F , —C(S)SR 3F , —SC(S)R 3F , —S(O) 1-2 OR 3F , —OS(O) 1-2 R 3F , —S(O) 1-2 NR 3G R 3F , and —NR 3G S(O) 1-2 R 3F ;

each R 3E is independently selected from oxo, optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 3F , —SR 3F , —S(O) 1-2 R 3F , —OR 3F , —NR 3G R 3F , —C(O)R 3F , —C(O)NR 3G R 3F , —NR 3G C(O)R 3F , —C(S)NR 3G R 3F , —NR 3G C(S)R 3F , —C(O)OR 3F , —OC(O)R 3F , —C(O)SR 3F , —SC(O)R 3F , —C(S)OR 3F , —OC(S)R 3F , —C(S)SR 3F , —SC(S)R 3F , —S(O) 1-2 OR 3F , —OS(O) 1-2 R 3F , —S(O) 1-2 NR 3G R 3F , and —NR 3G S(O) 1-2 R 3F ;

each R 3F is independently selected from H, C 1 -C 3 alkyl and C 1 -C 3 fluoroalkyl and

each R 3G is independently selected from H, C 1 -C 3 alkyl, and C 1 -C 3 fluoroalkyl;

R 4 is selected from the group consisting of hydrogen, optionally substituted C 1 -C 8 alkyl, optionally-substituted C 1 -C 8 alkenyl and optionally substituted C 1 -C 8 alkynyl; and

R 5 is phenyl, heteroaryl, cycloalkyl or heterocycloalkyl, each optionally substituted with 1-5 R 5E ,

in which

each R 5E is independently selected from oxo, optionally-substituted C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —CN, —SF 5 , —N 3 , —C(O)R 5F SR 5F , —S(O) 1-2 R 5F , —OR 5F , —NR 5G R 5F , —C(O)R 5F , —C(O)NR 5G R 5F , —NR 5G C(O)R 5F , —C(S)NR 5G R 5F , —NR 5G C(S)R 5F , —C(O)OR 5F , —OC(O)R 5F , —C(O)SR 5F , —SC(O)R 5F , —C(S)OR 5F , —OC(S)R 5F , SC(S)SR 5F , SC(S)R 5F , —S(O) 1-2 OR 5F , —OS(O) 1-2 R 5F , —S(O) 1-2 NR 5G R 5F , and —NR 5G S(O) 1-2 R 5F ;

each R 5F is independently selected from H, C 1 -C 3 alkyl and C 1 -C 3 fluoroalkyl and

each R 5G is independently selected from H and C 1 -C 3 alkyl;

wherein

each R 6 is selected from the group consisting of hydrogen, C 1 -C 3 alkyl and —C(O)(C 1 -C 3 alkyl);

each optionally substituted alkyl, alkenyl and alkynyl is unsubstituted, fluorinated or substituted with one or two hydroxyl groups;

each cycloalkyl has 3-10 ring carbons and is saturated or partially unsaturated;

each heterocylcloalkyl has 3-10 ring members and 1-3 heteroatoms independently selected from nitrogen, oxygen and sulfur, and is saturated or partially unsaturated;

each heteroaryl is a 5-6 membered monocyclic heteroaryl ring having 1-3 heteroatoms independently selected from nitrogen, oxygen and sulfur,

the method comprising:

coupling a halopyrazolylthiazole of formula (Ia)

wherein X is a halogen (e.g., Cl, Br or I);

Q 1 is selected from the group consisting of —C(O)OR 2C , —C(O)NR 2B R 2C , —C(O)NR 2B S(O) 2 R 2C , —C(O)NR 2B S(O) 2 NR 2B R 2C , —S(O) 2 R 2C , —N(R 2B )S(O) 2 R 2C , —S(O) 2 NR 2B R 2C , and —C(O)NH—O(C 1 -C 3 alkyl), in which

each R 2B is independently selected from H and C 1 -C 3 alkyl, and

each R 2C is independently selected from C 1 -C 3 alkyl and a protecting group;

and L 1 , R 1 , R 3 , and R 4 are as described for formula (I),

with an organoboron comprising R 5 moiety to obtain the compound of formula (I).

10. The method of claim 9 , wherein the organoboron is an boronic acid or boronic ester having R 5 substituted on the boron atom.

11. The method of claim 10 , wherein the organoboron has the formula:

wherein

R 5 is as described for formula (I), and

Y 1 and Y 2 are independently hydroxy or C 1 -C 4 alkoxy, or Y 1 and Y 2 together with B atom form a 5- or 6-membered ring having one or two oxygens in the ring bound to the boron.

12. The method of claim 10 , wherein the halopyrazolylthiazole of formula (Ia) and the organoboron are coupled in presence of a palladium catalyst and a base.

13. The method of claim 10 , wherein the compound of formula (I) is

14. A method for preparing a thiazolylhydrazine of formula (Ib)

wherein

X is a halogen;

L 1 is selected from the group consisting of a bond, —C(O)—, —S—, —S(O) 1-2 —, —O—, —NR 6 —, —C(O)NR 6 —, —NR 6 C(O)—, —C(S)NR 6 —, —NR 6 C(S)—, —C(O)O—, —OC(O)—, —C(O)S—, —SC(O)—, —C(S)O—, —OC(S)—, —C(S)S—, —SC(S)—, —S(O) 1-2 O—, —OS(O) 1-2 —, —S(O) 1-2 NR 6 — and —NR 6 S(O) 1-2 —;

R 1 is selected from the group consisting of C 1 -C 8 alkyl, C 1 -C 8 alkenyl and C 1 -C 8 alkynyl, each unsubstituted or fluorinated;

wherein

each R 6 is selected from the group consisting of hydrogen, C 1 -C 3 alkyl and —C(O)(C 1 -C 3 alkyl);

the method comprising:

reacting a dihalothiazole of formula

wherein X, R 1 , and L 1 are as described for formula (Ib), and X a is halogen, optionally in a solvent, with an aqueous solution of hydrazine to obtain a crude product; and

crystallizing the crude product from a hydrocarbon solvent to obtain the thiazolylhydrazine of formula (Ib).

15. The method of claim 14 , wherein X a is chloro or bromo.

16. The method of claim 1 , wherein

R 1 is unsubstituted C 1 -C 5 alkyl or fluorinated C 1 -C 5 alkyl;

L 1 is —S—;

R 3 is optionally substituted with 1-5 R 3E , in which each R 3E is independently selected from C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —OR 3F , and —NR 3G R 3F ; or wherein R 3E is independently selected from halogen, —OR 3F , and —NR 3G R 3F ;

R 4 is hydrogen or unsubstituted C 1 -C 6 alkyl;

R 5 is partially unsaturated cycloalkyl or phenyl, each optionally substituted with 1-5 R 5E ; and

Q 1 is —C(O)OR 2C .

17. The method of claim 1 , wherein the compound of formula (Ia) is:

18. The method of claim 1 , wherein the compound of formula (Ia) is:

wherein R 1 is C 1 -C 8 alkyl, and R 3E is independently selected from C 1 -C 4 alkyl, C 1 -C 4 fluoroalkyl, halogen, —OR 3F , and —NR 3G R 3F .

19. Ethyl 1-(4-bromo-5-(isopropylthio)thiazol-2-yl)-4-(3-fluorophenyl)-3-methyl-1H-pyrazole-5-carboxylate.

20. The method of claim 14 , wherein L 1 is —S— and R 1 is isopropyl.

Assignments (5)
NUNC PRO TUNC ASSIGNMENT Recorded Jun 5, 2025
From: O'SHEA, PAUL
To: EXEMPLIFY BIOPHARMA, INC.
Reel/Frame 071330/0570 →
NUNC PRO TUNC ASSIGNMENT Recorded Jun 5, 2025
From: EXEMPLIFY BIOPHARMA, INC.
To: BANTAM PHARMACEUTICAL, LLC
Reel/Frame 071330/0685 →
NUNC PRO TUNC ASSIGNMENT Recorded May 19, 2025
From: O'SHEA, PAUL
To: EXEMPLIFY BIOPHARMA, INC.
Reel/Frame 071153/0462 →
NUNC PRO TUNC ASSIGNMENT Recorded May 19, 2025
From: EXEMPLIFY BIOPHARMA, INC.
To: BANTAM PHARMACEUTICAL, LLC
Reel/Frame 071153/0465 →
NUNC PRO TUNC ASSIGNMENT Recorded May 14, 2025
From: COOPER, ALAN; ANANTHA, NARAYANAN
To: BANTAM PHARMACEUTICAL, LLC
Reel/Frame 071107/0996 →
Continuity (2)
Provisional Application 62855652 · May 31, 2019
Related Publication 20220267314A1 · Aug 25, 2022
References Cited (4)
WO 2018102452A2 · 2018 [cited by applicant]
Cooper et al., 27 Bioorg. & Med. Chem. Letts, 4471-4477 (2017) (Year: 2017). [cited by examiner]
PCT International Search Report and Written Opinion, Application No. PCT/US2020/035341, mailed Sep. 7, 2021, 11 pages. [cited by applicant]
Cooper, Alan B., Stephane Ciblat, Gerald Shipps, Jedd Levine, Matthew Kostura, Vibha Oza, Lea Constantineau-Forget et al. “1-Thiazol-2-yl-N-3-methyl-1H-pyrozole-5-carboxylic acid derivatives as antitumor agents.” Bioorg… [cited by applicant]