IP Library Granted Patent US 12,552,874
Granted Patent B2
US 12,552,874 · App. 17/779,720 · Granted Feb 17, 2026

Antibodies to carbohydrate antigens

Inventors: Vered Padler-Karavani (Tel Aviv, IL); Ron Amon (Tel Aviv, IL); Ronit Rosenfeld (Tel Aviv, IL)
Assignee: RAMOT AT TEL-AVIV UNIVERSITY LTD.
C07K16/2896A61K47/6849A61P35/00G01N33/57492C07K16/00C07K16/46C07K2317/565C07K2317/567C07K2317/622C07K2317/734C07K2317/92G01N2400/02
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,552,874
App. No.
17/779,720
Granted
Feb 17, 2026
Kind
B2
Abstract

The present invention discloses novel monoclonal antibodies and functional fragments thereof that specifically bind to SLeA carbohydrate antigen with high specificity and selectivity. The invention further provides compositions comprising the antibodies or fragments thereof as well as uses of the antibodies, fragments and compositions.

Claims (26)

1 . A monoclonal antibody (mAb) or a fragment thereof that specifically binds to Sialyl Lewis A glycan (SLeA), wherein the mAb or the fragment comprises an antigen binding domain comprising a heavy-chain variable domain (VH) and a light-chain variable domain (VL) each comprising three complementarity determining regions (CDRs), wherein the VH-CDR 1, 2 and 3 comprise amino acid sequences SEQ ID NOs: 15, 12, and 8, respectively, and the VL-CDRs 1, 2 and 3 comprise amino acid sequences SEQ ID NO: 9, 10, and 11, respectively.

2 . The mAb or fragment according to claim 1 , wherein VH-CDR1 comprises amino acid sequence selected from SEQ ID NO: 6 and 15, and the VH-CDR2 comprises amino acid sequence selected from SEQ ID NO: 12 and 21.

3 . The mAb or fragment according to claim 1 , wherein the CDRs 1, 2, and 3 of the VH domain comprises amino acid sequences SEQ ID NOs: 15, 21 and 8, respectively, the CDRs 1, 2, and 3 of the VL domain comprise amino acid sequences SEQ ID NOs: 9, 10 and 11, respectively, VH-framework domains (FRs) 1, 2 and 4 comprising amino acid sequences SEQ ID NOs: 24, 26 and 27, respectively, and a VL-FR1 comprising the amino acid sequence SEQ ID NO: 28.

4 . The mAb or fragment according to claim 1 , comprising:

i. a set of six CDR sequences comprising SEQ ID NOs: 15, 21, 8, 9, 10 and 11;

ii. a set of four VH framework sequences comprising SEQ ID NOs: 24, 26, 29 and 27;

and

iii. a set of four VL framework sequences comprising SEQ ID NOs: 28, 30, 31 and 32.

5 . The mAb or the fragment according claim 1 , wherein the VH domain comprises amino acid sequence set forth in SEQ ID NO: 3 and the VL domain comprises amino acid sequence set forth in SEQ ID NO: 5.

6 . The mAb or the fragment according to claim 1 , wherein the fragment is a single chain variable fragment (scFv).

7 . The mAb or the fragment according to claim 6 , wherein the scFv comprises amino acid sequences SEQ ID NO: 3 and SEQ ID NO: 5.

8 . The mAb or the fragment according to claim 7 , wherein the scFv comprises amino acid sequence SEQ ID NO: 22 or an analog thereof having at least 90% sequence identity to said sequence.

9 . The mAb or the fragment according to claim 1 , characterized by at least one of:

(i) the mAb or the fragment binds SLeA glycan with an equilibrium dissociation constant (K D ) of from about 0.1 to about 30 nM;

(ii) the selectivity of said mAb or the fragment to SLeA glycan is at least 90%;

(iii) the mAb or the fragment is a chimeric antibody or fragment:

(iv) the mAb or the fragment has an IgG structure; and

(v) the light chain constant region is selected from kappa and lambda.

10 . A conjugate comprising the mAb or the fragment according to claim 1 .

11 . A pharmaceutical composition comprising the mAb or the fragment according to claim 1 or a conjugate thereof, and a pharmaceutically acceptable carrier.

12 . A kit for diagnosing a cancer in a subject, wherein the kit comprises the mAb or the fragment according to claim 1 or a conjugate thereof and means for detecting the amount of the mAb or the fragment bound to cells of the biological sample.

13 . A monoclonal antibody (mAb) or a fragment thereof that specifically binds to Sialyl Lewis A glycan (SLeA), wherein the mAb or the fragment comprises an antigen binding domain comprising a heavy-chain variable domain (VH) and a light-chain variable domain (VL) each comprising three complementarity determining regions (CDRs) and four framework (FR) domains, wherein the VH-CDR 1, 2 and 3 comprise amino acid sequences SEQ ID NOs: 15, 12, and 8, respectively, the VL-CDRs 1, 2 and 3 comprise amino acid sequences SEQ ID NOs: 9, 10 and 11, respectively, the VH-FRs 1, 2 and 4 comprises acid sequences SEQ ID NOs: 23, 26 and 27, respectively, and the VL-FR 1 comprises acid sequence SEQ ID NO: 28.

14 . The mAb or fragment according to claim 13 , wherein the CDRs 1, 2, and 3 of the VH domain comprises amino acid sequences SEQ ID NOs: 15, 21 and 8, respectively, the CDRs 1, 2, and 3 of the VL domain comprise amino acid sequences SEQ ID NOs: 9, 10 and 11, respectively, the VH-(FRs) 1, 2 and 4 comprise amino acid sequences SEQ ID NOs: 24, 26 and 27, respectively, and the VL-FR1 comprising the amino acid sequence SEQ ID NO: 28.

15 . The mAb or the fragment according to claim 13 , wherein the fragment is a single chain variable fragment (scFv).

16 . A conjugate comprising the mAb or the fragment according to claim 13 .

17 . A kit for diagnosing, cancer in a subject, wherein the kit comprises the mAb or fragment thereof according to claim 15 or a conjugate thereof and means for detecting the amount of the antibodies or antibody fragments bound to cells of the biological sample.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 25, 2022
From: PADLER-KARAVANI, VERED; AMON, RON; ROSENFELD, RONIT
To: RAMOT AT TEL-AVIV UNIVERSITY LTD.
Reel/Frame 060013/0387 →
Continuity (3)
Provisional Application 63060675 · Aug 4, 2020
Provisional Application 62940273 · Nov 26, 2019
Related Publication 20230174664A1 · Jun 8, 2023
References Cited (77)
US 4471057A · Koprowski · 1984 [cited by applicant]
US 7465787B2 · Wittrup · 2008 [cited by applicant]
US 10036747B2 · Pancer · 2018 [cited by applicant]
US 20200308223A1 · Chang · 2020 [cited by applicant]
EP 0404097A2 · 1990 [cited by applicant]
EP 3328894B1 · 2018 [cited by applicant]
EP 3265490B1 · 2019 [cited by applicant]
EP 3423496B1 · 2019 [cited by applicant]
KR 20190092285A · 2019 [cited by applicant]
WO 9311161A1 · 1993 [cited by applicant]
WO 0127159A2 · 2001 [cited by applicant]
WO 2012079000A1 · 2012 [cited by applicant]
WO 2013040557A2 · 2013 [cited by applicant]
WO 2013074916A1 · 2013 [cited by applicant]
WO 2015053871A2 · 2015 [cited by applicant]
WO 2016057890A1 · 2016 [cited by applicant]
WO 2016077526A1 · 2016 [cited by applicant]
WO 2017025038A1 · 2017 [cited by applicant]
WO 2018160909A1 · 2018 [cited by applicant]
WO 2020081988A1 · 2020 [cited by applicant]
WO 2021105989A1 · 2021 [cited by applicant]
WO 2022113066A1 · 2022 [cited by applicant]
WO 2022153298A1 · 2022 [cited by applicant]
Partyka et al., (2012) Diverse monoclonal antibodies against the CA 19-9 antigen show variation in binding specificity with consequences for clinical interpretation. Author Manuscript. Proteomics 12(13): 2212-2220. [cited by applicant]
Sawada et al., (2011) Human monoclonal antibodies to sialyl-Lewis (CA19.9) with potent CDC, ADCC, and antitumor activity. Clin Cancer Res 17(5): 1024-1032. [cited by applicant]
Amon et al., (2020) Directed Evolution of Therapeutic Antibodies Targeting Glycosylation in Cancer. Cancers (Basel) 12(10): 2824. With Supplementary Materials. [cited by applicant]
Ashkani and Naidoo (2016) Glycosyltransferase Gene Expression Profiles Classify Cancer Types and Propose Prognostic Subtypes. Sci Rep 6: 26451. [cited by applicant]
Benatuil et al., (2010) An improved yeast transformation method for the generation of very large human antibody libraries. Protein Eng Des Sel 23(4): 155-159. [cited by applicant]
Bird et al., (1988) Single-chain antigen-binding proteins. Science 242(4877): 423-426. [cited by applicant]
Boligan et al., (2015) Cancer intelligence acquired (CIA): tumor glycosylation and sialylation codes dismantling antitumor defense. Cell Mol Life Sci 72(7): 1231-1248. [cited by applicant]
Colby et al., (2004) Engineering antibody affinity by yeast surface display. Methods Enzymol 388: 348-358. [cited by applicant]
DeSelm et al., (2018) Low-Dose Radiation Conditioning Enables CAR T Cells to Mitigate Antigen Escape. Mol Ther 26(11): 2542-2552. [cited by applicant]
Dube and Bertozzi (2005) Glycans in cancer and inflammation—potential for therapeutics and diagnostics. Nat Rev Drug Discov 4(6): 477-488. [cited by applicant]
Elinav et al., (2009) Amelioration of colitis by genetically engineered murine regulatory T cells redirected by antigen-specific chimeric receptor. Gastroenterology 136(5): 1721-1731. [cited by applicant]
Eshhar et al., (1993) Specific activation and targeting of cytotoxic lymphocytes through chimeric single chains consisting of antibody-binding domains and the gamma or zeta subunits of the immunoglobulin and T-cell rece… [cited by applicant]
Fesnak et al., (2016) Engineered T cells: the promise and challenges of cancer immunotherapy. Nat Rev Cancer. Author manuscript; available in PMC Aug. 23, 2017. Published in final edited form as: Nat Rev Cancer. Aug. 23… [cited by applicant]
Friedmann-Morvinski et al., (2005) Redirected primary T cells harboring a chimeric receptor require costimulation for their antigen-specific activation. Blood 105(8): 3087-3093. [cited by applicant]
Gauthier and Yakoub-Agha (2017) Chimeric antigen-receptor T-cell therapy for hematological malignancies and solid tumors: Clinical data to date, current limitations and perspectives. Curr Res Transl Med 65(3): 93-102. [cited by applicant]
Gross et al., (1989) Expression of immunoglobulin-T-cell receptor chimeric molecules as functional receptors with antibody-type specificity. Proc Natl Acad Sci U S A 86(24): 10024-10028. [cited by applicant]
Holliger et al., (1993) “Diabodies”: small bivalent and bispecific antibody fragments. Proc Natl Acad Sci U S A 90(14): 6444-6448. [cited by applicant]
Hong et al., (2013) Sugar-binding proteins from fish: selection of high affinity “lambodies” that recognize biomedically relevant glycans. ACS Chem Biol. Author manuscript; available in PMC Jan. 18, 2014. Published in f… [cited by applicant]
Hughes et al., (2005) Transfer of a TCR gene derived from a patient with a marked antitumor response conveys highly active T-cell effector functions. Hum Gene Ther. Author manuscript; available in PMC Jun. 12, 2006. Pub… [cited by applicant]
Huston et al., (1988) Protein engineering of antibody binding sites: recovery of specific activity in an anti-digoxin single-chain Fv analogue produced in [cited by applicant]
Keyel and Reynolds (2018) Spotlight on dinutuximab in the treatment of high-risk neuroblastoma: development and place in therapy. Biologics 13: 1-12. [cited by applicant]
Kochenderfer and Rosenberg (2013) Treating B-cell cancer with T cells expressing anti-CD19 chimeric antigen receptors. Nat Rev Clin Oncol. Author manuscript; available in PMC Jan. 7, 2019. Published in final edited form… [cited by applicant]
Koprowski et al., (1979) Colorectal carcinoma antigens detected by hybridoma antibodies. Somatic Cell Genet 5(6): 957-971. [cited by applicant]
Lei et al., (2016) Immunocompromised and immunocompetent mouse models for head and neck squamous cell carcinoma. Onco Targets Ther 9: 545-555. [cited by applicant]
Leviatan Ben-Arye et al., (2017) Profiling Anti-Neu5Gc IgG in Human Sera with a Sialoglycan Microarray Assay. J Vis Exp (125): 56094. [cited by applicant]
Louis et al., (2011) Antitumor activity and long-term fate of chimeric antigen receptor-positive T cells in patients with neuroblastoma. Blood 118(23): 6050-6056. [cited by applicant]
Loureiro et al., (2018) Development of a novel target module redirecting UniCAR T cells to Sialyl Tn-expressing tumor cells. Blood Cancer J 8(9): 81. [cited by applicant]
Maliar et al., (2012) Redirected T cells that target pancreatic adenocarcinoma antigens eliminate tumors and metastases in mice. Gastroenterology 143(5): 1375-1384.e5. [cited by applicant]
Mare and Trinchera (2004) Suppression of beta 1,3galactosyltransferase beta 3Gal-T5 in cancer cells reduces sialyi-Lewis a and enhances poly N-acetyllactosamines and sialyl-Lewis x on O-glycans. Eur J Biochem 271(1): 18… [cited by applicant]
Padler-Karavani et al., (2012) Cross-comparison of protein recognition of sialic acid diversity on two novel sialoglycan microarrays. J Biol Chem 287(27): 22593-22608. [cited by applicant]
Pinthus et al., (2004) Adoptive immunotherapy of prostate cancer bone lesions using redirected effector lymphocytes. J Clin Invest 114(12): 1774-1781. [cited by applicant]
Posey et al., (2016) Engineered CAR T Cells Targeting the Cancer-Associated Tn-Glycoform of the Membrane Mucin MUC1 Control Adenocarcinoma. Immunity 44(6): 1444-1454. [cited by applicant]
Sadelain et al., (2009) The promise and potential pitfalls of chimeric antigen receptors. Curr Opin Immunol. Author manuscript; available in PMC Aug. 8, 2017. Published in final edited form as: Curr Opin Immunol. Apr. 2… [cited by applicant]
Sadelain et al., (2013) The basic principles of chimeric antigen receptor design. Cancer Discov 3(4): 388-398. [cited by applicant]
Sadelain et al., (2017) Therapeutic T cell engineering. Nature 545(7655): 423-431. [cited by applicant]
Steentoft et al., (2018) Glycan-directed CAR-T cells. Glycobiology 28(9): 656-669. [cited by applicant]
Stowell et al., (2015) Protein glycosylation in cancer. Annu Rev Pathol. Author manuscript; available in PMC Jan. 1, 2016. Published in final edited form as: Annu Rev Pathol. 2015; 10: 473-510. [cited by applicant]
Takada et al., (1993) Contribution of carbohydrate antigens sialyl Lewis A and sialyl Lewis X to adhesion of human cancer cells to vascular endothelium. Cancer Res 53(2): 354-361. [cited by applicant]
Turtle (2014) Chimeric antigen receptor modified T cell therapy for B cell malignancies. Int J Hematol 99(2): 132-140. [cited by applicant]
Ugorski and Laskowska (2002) Sialyl Lewis(a): a tumor-associated carbohydrate antigen involved in adhesion and metastatic potential of cancer cells. Acta Biochim Pol 49(2): 303-311. [cited by applicant]
Ward et al., (1989) Binding activities of a repertoire of single immunoglobulin variable domains secreted from [cited by applicant]
Zhao et al., (2009) A herceptin-based chimeric antigen receptor with modified signaling domains leads to enhanced survival of transduced T lymphocytes and antitumor activity. J Immunol 183(9): 5563-5574. [cited by applicant]
Zhao et al., (2015) Alteration of Electrostatic Surface Potential Enhances Affinity and Tumor Killing Properties of Anti-ganglioside GD2 Monoclonal Antibody hu3F8. J Biol Chem 290(21): 13017-13027. [cited by applicant]
Zhou et al., (2011) Immunologic mapping of glycomes: implications for cancer diagnosis and therapy. Front Biosci (Schol Ed) 3(4): 1520-1532. [cited by applicant]
Ahmadzadeh et al., (2014) Antibody humanization methods for development of therapeutic applications. Monoclon Antib Immunodiagn Immunother 33(2): 67-73. [cited by applicant]
Boyiadzis et al., (2018) Chimeric antigen receptor (CAR) T therapies for the treatment of hematologic malignancies: clinical perspective and significance. J Immunother Cancer 6(1): 137. [cited by applicant]
Brudno et al., (2020) Safety and feasibility of anti-CD19 CAR T cells with fully human binding domains in patients with B-cell lymphoma. Nat Med. Author manuscript; available in PMC Jan. 4, 2021. Published in final edit… [cited by applicant]
Cohen and Varki (2010) The sialome—far more than the sum of its parts. OMICS 14(4): 455-464. [cited by applicant]
Lahoud et al., (2021) Tumour markers and their utility in imaging of abdominal and pelvic malignancies. Clin Radiol 76(2): 99-107. [cited by applicant]
Langereis et al., (2015) Complexity and Diversity of the Mammalian Sialome Revealed by Nidovirus Virolectins. Cell Rep 11(12): 1966-1978. [cited by applicant]
Paul and Padler-Karavani (2018) Evolution of sialic acids: Implications in xenotransplant biology. Xenotransplantation 25(6): e12424. [cited by applicant]
Pyeon et al., (2015) Abnormally high level of CA-19-9 in a benign ovarian cyst. Obstet Gynecol Sci 58(6): 530-532. [cited by applicant]
Safdari et al., (2013) Antibody humanization methods—a review and update. Biotechnol Genet Eng Rev 29: 175-186. [cited by applicant]
Waldmann (2019) Human Monoclonal Antibodies: The Benefits of Humanization. In: Steinitz, M. (eds) Human Monoclonal Antibodies. Methods in Molecular Biology, vol. 1904. Humana Press, New York, NY. https://doi.org/10.1007… [cited by applicant]