IP Library › Granted Patent US 12,611,440
Granted Patent B2
US 12,611,440 · App. 17/639,618 · Granted Apr 28, 2026

Fusion proteins and uses thereof

Inventors: Mette Marie Rosenkilde (Hellerup, DK); Mads Gravers Jeppesen (Glostrup, DK); Thomas N. Kledal (Lyngby, DK)
Assignee: SYNKLINO A/S
A61K38/168A01N1/124A61K31/42A61K31/517A61K31/522A61K31/675A61K35/17A61K38/164A61K38/177A61K38/1793A61P31/00A61P31/22C07K14/21C07K14/34C07K14/415C07K14/705C07K14/7158C07K2319/50C07K2319/55
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 12,611,440
App. No.
17/639,618
Granted
Apr 28, 2026
Kind
B2
Abstract

A fusion protein is provided which comprises a first and a second peptide. The first peptide enables the fusion protein to bind to a receptor expressed on a cell, and the second peptide having a cleavage site that enables the fusion protein to kill said cell. The fusion protein is thus useful for the prevention or treatment of an infection caused by a pathogen. Nucleic acids encoding the fusion protein and methods of making and using the fusion protein are also provided.

Claims (21)

1 . A fusion protein consisting of the amino acid sequence of SEQ ID NO: 6.

2 . The fusion protein according to claim 1 , wherein the fusion protein has increased potency against cells expressing US28 as compared to the potency against cells expressing CX3CR1.

3 . The fusion protein according to claim 1 , wherein the fusion protein has increased affinity for US28 as compared to the affinity for CX3CR1.

4 . A pharmaceutical composition comprising the fusion protein according to claim 1 and a pharmaceutically acceptable carrier, diluent, or excipient.

5 . The pharmaceutical composition according to claim 4 , further comprising one or more further agents.

6 . The pharmaceutical composition according to claim 5 , wherein the agent is an immunosuppressive agent, anti-viral agent, or immunotherapy.

7 . The pharmaceutical composition according to claim 6 , wherein the anti-viral agent is valganciclovir, ganciclovir, cidofovir, leflunomide, prevymis, maribavir, or brincidofovir.

8 . The pharmaceutical composition according to claim 6 , wherein the immunotherapy is T cell therapy.

9 . An isolated nucleic acid molecule encoding the fusion protein according to claim 1 .

10 . A vector comprising the nucleic acid molecule according to claim 9 .

11 . A recombinant host cell comprising the nucleic acid molecule according to claim 9 or the vector according to claim 10 .

12 . A method of treating a CMV infection or a CMV-associated disorder in an individual in need thereof, the method comprising administering a therapeutically effective amount of the fusion protein according to claim 1 or the pharmaceutical composition according to claim 4 to the individual.

13 . The method according to claim 12 , wherein the CMV infection is a latent or lytic CMV infection.

14 . The method according to claim 12 , wherein the CMV infection is an infection in an immune-compromised patient that is a HIV-patient, neonates and immunosuppressive patient, bone marrow transplant patient, solid organ transplant patient, immune therapy patient, cancer patient, intensive care patient, trauma patient, stem cell patient, gene therapy patient, cell therapy patient, geriatric patient, or multimorbid patient.

15 . The method according to claim 12 , wherein the CMV infection is an infection in a patient suffering from a coronary disease or a vascular disease.

16 . The method according to claim 12 , wherein the CMV-associated disorder is cytomegaloviral pneumonitis, cytomegaloviral hepatitis, cytomegaloviral pancreatitis, cytomegaloviral mononucleosis, CMV polyradiculomyelopathy, cytomegalic inclusion body disease, cytomegalovirus colitis, cytomegalovirus esophagitis, cytomegalovirus retinitis, Guillain-Barre syndrome, mucoepidermoid carcinoma, ulcerative colitis, graft versus host disease (GVHD), or solid organ transplant graft versus host disease (SOT-GVHD).

17 . The method according to claim 12 , wherein the individual is a human.

18 . The method according to claim 17 , wherein the human is an immunocompromised patient.

19 . The method according to claim 17 , wherein the human is a child or an adult.

20 . The method according to claim 17 , wherein the fusion protein or the pharmaceutical composition is administered one or more times to a human that is an immunocompromised patient or a human that is in need of a solid organ transplantation or a human that is in need of a hematopoietic stem cell transplantation.

21 . A method of ex vivo treatment of a CMV infection of a solid organ for transplantation or a hematopoietic stem cell for transplantation, the method comprising contacting the fusion protein according to claim 1 or the pharmaceutical composition according to claim 4 with said solid organ or stem cell.

Assignments (2)
CHANGE OF NAME Recorded Dec 23, 2025
From: SYNKLINO APS
To: SYNKLINO A/S
Reel/Frame 074056/0172 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 2, 2022
From: ROSENKILDE, METTE MARIE; JEPPESEN, MADS GRAVERS; KLEDAL, THOMAS N.
To: SYNKLINO APS
Reel/Frame 059144/0021 →
Priority Claims (1)
EP 19195122 · Sep 3, 2019 · regional
Continuity (1)
Related Publication 20220288160A1 · Sep 15, 2022
References Cited (22)
US 8592554B2 · Kledal et al. · 2013 [cited by applicant]
US 9078428B2 · Hassanein et al. · 2015 [cited by applicant]
US 10039276B2 · Hassanein et al. · 2018 [cited by applicant]
US 20100048470A1 · Kledal · 2010 [cited by examiner]
RU 2616245C2 · 2017 [cited by applicant]
WO WO2008003327A2 · 2008 [cited by examiner]
Klimstra et al. The Furin Protease Cleavage Recognition Sequence of Sindbis Virus PE2 Can Mediate Virion Attachment to Cell Surface Heparan Sulfate. Journal of Virology (1999), 73(8), 6299-6306. (Year: 1999). [cited by examiner]
Jenny et al. A critical review of the methods for cleavage of fusion proteins with thrombin and factor Xa. Protein Expression and Purification (2003), 31, 1-11; (Year: 2003). [cited by examiner]
Burg et al., Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor, Science, 2015, vol. 347, Issue 6226, 6 Pages. [cited by applicant]
Chiron et al., “Cleavage of Pseudomonas Exotoxin and Diphtheria Toxin by a Furin-like Enzyme Prepared from Beef Liver”, The Journal of Biological Chemistry, 1994, vol. 269, No. 27, Issue of Jul. 8, pp. 18167-18176. [cited by applicant]
Hwnag et al., “Functional domains of pseudomonas exotoxin identified by deletion analysis of the gene expressed in [cited by applicant]
Krishna et al., “Targeting the latent cytomegalovirus reservoir with an antiviral fusion toxin protein”, Nature Communications, Feb. 2, 2017, 9 Pages. [cited by applicant]
Mizoue et al., Molecular Determinants of Receptor Binding and Signaling by the CX3C Chemokine Fractalkine, The Journal of Biological Chemistry, 2001, vol. 276, No. 36, Issue of Sep. 7, 2001, pp. 33906-33914. [cited by applicant]
Siegall et a., “Functional analysis of domains II, lb, and III of Pseudomonas exotoxin,” Journal of Biological Chemistry, Aug. 25, 1989, vol. 264, No. 24, pp. 14256-14261. [cited by applicant]
Spiess et al., “Novel Chemokine-Based Immunotoxins for Potent and Selective Targeting of Cytomegalovirus Infected Cells”, Journal of Immunology Research, vol. 2017, Jan. 30, 2017, pp. 1-12. [cited by applicant]
Spiess et al., “Rationally designed chemokine-based toxin targeting the viral G protein-coupled receptor US28 potently inhibits cytomegalovirus infection in Vivo”, Proceedings of the National Academy of Sciences, vol. 1… [cited by applicant]
Badri H. et al., “Optimization of radiation dosing schedules for proneural glioblastoma,” J Math Bio, vol. 72, Issue 5, 2016, pp. 1301-1336. [cited by applicant]
Baylot V. et al., “TCTP Has a Crucial Role in the Different Stages of Prostate Cancer Malignant Progression,” Results Probl Cell Differ, vol. 64, 2017, pp. 255-261. [cited by applicant]
Kussie P.H. et al., “A single engineered amino acid substitution changes antibody fine specificity,” J Immunol., vol. 152, Issue 1, 1994, pp. 146-152. [cited by applicant]
Rudikoff S. et al., “Single amino acid substation altering antigen-binding specificity,” Proc Natl Acad Sci USA, vol. 79, Issue 6, 1982, pp. 1979-1983. [cited by applicant]
Yulish Ye.I., “Cytomegalovirus infection in children: treatment approaches in different course of infection,” Zdorovie Rebenka/Children Health, vol. 64, No. 4, 2015, pp. 11-18. [cited by applicant]
Spiess K. et al.,“Rationally designed chemokine-based toxin targeting the viral G protein-coupled receptor US28 potently inhibits cytomegalovirus infection in Vivo”, Proceedings of the National Academy of Sciences, vol.… [cited by applicant]