IP Library › Granted Patent US 12,709,756
Granted Patent B2
US 12,709,756 · App. 18/167,581 · Granted Aug 18, 2026

Plant cells, plants, and seeds having targeted enhancer element insertions

Inventors: Yajie Niu (Lexington, MA); Randall William Shultz (Acton, MA); Maria Margarita D. Unson (Pawcatuck, CT); Michael Andreas Kock (Rheinfelden, DE); John Patrick Casey, Jr. (Boston, MA)
Assignee: INARI AGRICULTURE TECHNOLOGY, INC.
C12N15/8213
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Quick Facts
Patent No.
US 12,709,756
App. No.
18/167,581
Filed
Feb 10, 2023
Granted
Aug 18, 2026
Kind
B2
Art Unit
1662
USPC
800/278
Abstract

The invention relates to novel plants, seeds and compositions, as well as improvements to plant breeding and methods for creating modifications in plant genomes.

Claims (13)

1 . A modified plant cell comprising a targeted modification in a first gene and a targeted modification in a second gene, wherein the targeted modifications result in an increase in expression of the first gene and the second gene relative to a plant cell lacking the modifications, wherein the targeted modifications comprise an insertion of an enhancer element consisting of SEQ ID NO: 343.

2 . The modified plant cell of claim 1 , wherein the targeted modifications comprise an insertion of the enhancer element in the promoter region of the first gene and the second gene.

3 . The modified plant cell of claim 1 , wherein the targeted modifications comprise an insertion of the enhancer element at about 50 to about 500 nucleotides upstream of the start codon of the first gene and the second gene.

4 . The modified plant cell of claim 1 , wherein the plant cell is a maize plant cell.

5 . The modified plant cell of claim 1 , wherein the plant cell is a soybean plant cell.

6 . A plant comprising the modified plant cell of claim 1 .

7 . The plant of claim 6 , wherein the plant is an inbred line or an F1 hybrid.

8 . A plant part comprising the modified plant cell of claim 1 , optionally wherein the plant part is a seed.

9 . A method of manufacturing commercial seed comprising growing the plant of claim 6 , and optionally further multiplying or propagating the plant, and using the plant to produce commercial seed.

10 . A method of manufacturing a processed plant product comprising processing the plant of claim 6 or a part thereof into the product.

11 . The method of claim 10 , wherein the product is seed meal, starch, sugar, silage, or oil.

12 . A processed plant product comprising the modified plant cell of claim 1 .

13 . The processed plant product of claim 12 , wherein the product is seed meal.

Continuity (12)
Division 16480992 · Jan 29, 2018
Provisional Application 62451708 · Jan 28, 2017
Provisional Application 62451710 · Jan 28, 2017
Provisional Application 62452610 · Jan 31, 2017
Provisional Application 62477244 · Mar 27, 2017
Provisional Application 62480989 · Apr 3, 2017
Provisional Application 62510645 · May 24, 2017
Provisional Application 62523675 · Jun 22, 2017
Provisional Application 62530495 · Jul 10, 2017
Provisional Application 62530839 · Jul 10, 2017
Provisional Application 62531305 · Jul 11, 2017
Related Publication 20230242927A1 · Aug 3, 2023
References Cited (170)
US 5573932A · Ellis · 1996 [cited by examiner]
US 6453242B1 · Eisenberg et al. · 2002 [cited by applicant]
US 6534261B1 · Cox, III · 2003 [cited by applicant]
US 7422889B2 · Sauer · 2008 [cited by applicant]
US 7605300B2 · Gan et al. · 2009 [cited by applicant]
US 7691995B2 · Zamore · 2010 [cited by applicant]
US 7786350B2 · Allen · 2010 [cited by applicant]
US 7816581B2 · Gilbertson · 2010 [cited by applicant]
US 8030473B2 · Carrington · 2011 [cited by applicant]
US 8314290B2 · Allen · 2012 [cited by applicant]
US 8334430B2 · Allen · 2012 [cited by applicant]
US 8395023B2 · Gilbertson · 2013 [cited by applicant]
US 8404928B2 · Allen · 2013 [cited by applicant]
US 8410334B2 · Allen · 2013 [cited by applicant]
US 8697359B1 · Zhang · 2014 [cited by applicant]
US 8771945B1 · Zhang · 2014 [cited by applicant]
US 8795965B2 · Zhang · 2014 [cited by applicant]
US 8816153B2 · Gilbertson · 2014 [cited by applicant]
US 8865406B2 · Zhang · 2014 [cited by applicant]
US 8871445B2 · Cong · 2014 [cited by applicant]
US 8889356B2 · Zhang · 2014 [cited by applicant]
US 8889418B2 · Zhang · 2014 [cited by applicant]
US 8895308B1 · Zhang · 2014 [cited by applicant]
US 8906616B2 · Zhang · 2014 [cited by applicant]
US 8932814B2 · Cong · 2015 [cited by applicant]
US 8945839B2 · Zhang · 2015 [cited by applicant]
US 8946511B2 · Allen · 2015 [cited by applicant]
US 8993233B2 · Zhang · 2015 [cited by applicant]
US 8999641B2 · Zhang · 2015 [cited by applicant]
US 9040774B2 · Ivashuta · 2015 [cited by applicant]
US 9139838B2 · Huang · 2015 [cited by applicant]
US 9192112B2 · Allen · 2015 [cited by applicant]
US 11220694B1 · Cermak et al. · 2022 [cited by applicant]
US 11603536B2 · Flavell · 2023 [cited by examiner]
US 20070011761A1 · Thai · 2007 [cited by applicant]
US 20090293148A1 · Ren · 2009 [cited by applicant]
US 20130326645A1 · Cost · 2013 [cited by applicant]
US 20150047074A1 · Strano · 2015 [cited by applicant]
US 20150059010A1 · Cigan · 2015 [cited by applicant]
US 20150082478A1 · Cigan · 2015 [cited by applicant]
US 20150307889A1 · Petolino et al. · 2015 [cited by applicant]
US 20150344912A1 · Kim · 2015 [cited by applicant]
US 20160017348A1 · Jacobsen · 2016 [cited by applicant]
US 20160138008A1 · Doudna · 2016 [cited by applicant]
US 20160194653A1 · Cutler · 2016 [cited by applicant]
US 20160208243A1 · Zhang · 2016 [cited by applicant]
US 20160264981A1 · Yang · 2016 [cited by applicant]
US 20160304891A1 · Brower-Toland · 2016 [cited by applicant]
US 20170037432A1 · Donohoue · 2017 [cited by applicant]
US 20170166912A1 · Brower-Toland · 2017 [cited by applicant]
US 20170175140A1 · Hummel et al. · 2017 [cited by applicant]
US 20190264218A1 · Shultz · 2019 [cited by applicant]
US 20190352655A1 · Niu · 2019 [cited by applicant]
US 20210324401A1 · Abbitt · 2021 [cited by examiner]
AU 2011204287A1 · 2012 [cited by examiner]
CN 104450745A · 2015 [cited by applicant]
DE 4222407C1 · 1993 [cited by examiner]
WO WO0127297A2 · 2001 [cited by examiner]
WO 2015006294A2 · 2015 [cited by applicant]
WO 2015131101A1 · 2015 [cited by applicant]
WO 2016007347A1 · 2016 [cited by applicant]
WO 2016007948A1 · 2016 [cited by applicant]
WO 2016044698A1 · 2016 [cited by applicant]
WO 2016123514A1 · 2016 [cited by applicant]
Svitashev et al (Genome editing in maize directed by CRISPR-Cas9 ribonucleoprotein complexes. Nature communications, 1-7, 2016) (Year: 2016). [cited by examiner]
Jacobs et al (Targeted genome modifications in soybean with CRISPR/Cas9. BMC Biotechnology. 1-10, 2015) (Year: 2015). [cited by examiner]
UniProt Sequence Accession B9TSW5 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProt Sequence Accession Q1HFQ1 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProt Sequence Accession Q53CL7 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProt Sequence Accession Q9FDY4 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProtKB—P00333 (ADH1_MAIZE); retrieved from www.uniprot.org/uniprot/P00333 <http://www.uniprot.org/uniprot/P00333> on Oct. 29, 2020. [cited by applicant]
UniProtKB—P13526 (ARLC_MAIZE); retrieved from www.uniprot.org/uniprot/P13526 <http://www.uniprot.org/uniprot/P13526> on Oct. 29, 2020. [cited by applicant]
UniProtKB—W8E7P1 (W8E7P1_SOYBN); retrieved from the internet site <http://www.uniprot.org/uniprot/W8E7P1 > on Nov. 12, 2020. [cited by applicant]
Van De Wiel et al., “New Traits in Crops Produced by Genome Editing Techniques Based on Deletions”, Plant Biotechnology Reports, 2017, pp. 1-8, vol. 11. [cited by applicant]
Walker et al., “Molecular Mechanisms of Auxin Action”, Current Opinion in Plant Biology, 1998, pp. 434-439, vol. 1. [cited by applicant]
Williams et al., “Sequences Flanking the Hexameric G-Box Core CACGTG Affect the Specificity of Protein Binding”, The Plant Cell, Apr. 1992, pp. 485-496, vol. 4. [cited by applicant]
Wong et al., “Lipid Exchange Envelope Penetration (LEEP) of Nanoparticles for Plant Engineering: A Universal Localization Mechanism”, Nano Letters, 2016, pp. 1161-1172, vol. 16. [cited by applicant]
Xu et al, “Global translational reprogramming is a fundamental layer of immune regulation in plants”, Nature, May 25, 2017, pp. 487-490, vol. 545, No. 7655. [cited by applicant]
Xu et al., “uORF-mediated translation allows engineered plant disease resistance without fitness costs”, Nature, May 25, 2017, pp. 491-494, vol. 545, No. 7655. [cited by applicant]
Xu et al., “The Soybean-Specific Maturity Gene E1 Family of Floral Repressors Controls Night-Break Responses Through Down-Regulation of Flowering Locus T Orthologs”, Plant Physiology, Aug. 2015, pp. 1735-1746, vol. 168. [cited by applicant]
Yadava et al., “Advances in Maize Transformation Technologies and Development of Transgenic Maize”, Frontiers in Plant Science, Jan. 2017, pp. 1-12, vol. 7, Article 1949. [cited by applicant]
Yang et al, “PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas Endonuclease”, Cell, Dec. 15, 2016, pp. 1814-1828, vol. 167, Elsevier Inc. [cited by applicant]
Ye et al., “Tuber-Specific Silencing of the Acid Invertase Gene Substantially Lowers the Acrylamide-Forming Potential of Potato”, Journal of Agricultural and Food Chemistry, 2010, pp. 12162-12167, vol. 58, No. 23. [cited by applicant]
You et al., “Design of LNA probes that improve mismatch discrimination”, Nucleic Acids Research, 2006, 11 pages, vol. 34, No. 8. [cited by applicant]
Zetschte et al, “Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System” Oct. 22, 2015, Cell, pp. 759-771, vol. 163, Elsevier Inc. [cited by applicant]
Zhang et al, “Genetic transformation of commercial cultivars of oat ( [cited by applicant]
Zhang et al., “Molecular Recognition Using Corona Phase Complexes Made of Synthetic Polymers Adsorbed on Carbon Nanotubes”, Nature Nanotechnology, Nov. 24, 2013, pp. 959-968, vol. 8. [cited by applicant]
Zhu et al., “Silencing of Vacuolar Invertase and Asparagine Synthetase Genes and Its Impact on Acrylamide Formation of Fried Potato Products”, Plant Biotechnology Journal, 2016, pp. 709-718, vol. 14. [cited by applicant]
Zhu et al., “Vacuolar Invertase Gene Silencing in Potato ( [cited by applicant]
Andersson et al., “Efficient Targeted Multiallelic Mutagenesis in Tetraploid Potato ( [cited by applicant]
Bartlett et al., “Mapping Genome-Wide Transcription Factor Binding Sites Using DAP-Seq”, Nat. Protoc., 2017, pp. 1659-1672, vol. 12, No. 8. [cited by applicant]
Office Action for U.S. Appl. No. 16/261,233 dated Jun. 12, 2020. [cited by applicant]
Office Action for U.S. Appl. No. 16/261,243 dated Jun. 26, 2020. [cited by applicant]
O'Malley et al., “Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape”, Cell, 2016, pp. 1280-1292, vol. 165. [cited by applicant]
Pnueli et al., “The Self-Pruning Gene of Tomato Regulates Vegetative to Reproductive Switching of Sympodial Meristems and is the Ortholog of CEN and TFL1”, Development, 1998, pp. 1979-1989, vol. 123, No. 11. [cited by applicant]
Schaeffer et al., “CRISPR/Cas9-Mediated Genome Editing and Gene Replacement in Plants: Transitioning from Lab to Field”, Plant Science, 2015, pp. 130-142, vol. 240. [cited by applicant]
Soyk et al., “Bypassing Negative Epistasis on Yield in Tomato Imposed by a Domestication Gene”, Cell, 2017, pp. 1142-1155, vol. 169. [cited by applicant]
Stroud et al, “Plants regenerated from tissue culture contain stable epigenome changes in rice”, eLife, Mar. 19, 2013, pp. 1-14. [cited by applicant]
Svitashev et al., “Targeted Mutagenesis, Precise Gene Editing, and Site-Specific Gene Insertion in Maize using Cas9 and Guide RNA”, Plant Physiology, 2015, pp. 931-945, vol. 169. [cited by applicant]
Szczesniak et al., “ERISdb: A Database of Plant Splice Sites and Splicing Signals”, Plant Cell Physiol., 2013, 8 pages, vol. 54, No. 2. [cited by applicant]
Tomato Genome Consortium, “The Tomato Genome Sequence Provides Insight into Fleshy Fruit Evolution”, Nature, 2012, pp. 635-641, vol. 485, No. 7400. [cited by applicant]
UniProt Sequence Accession ADH1 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProt Sequence Accession ARLC for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
Wang et al, “Simultaneous Editing of Three Homoeoalleles in Hexaploid in Hexaploid Bread Wheat Confers Heritable Resistance to Powdery Mildew”, Nature Biotechnology, Sep. 2014, pp. 947-952, vol. 32, No. 9. [cited by applicant]
Weinthal et al., “Plant Genome Editing and Its Applications in Cereals”, Intech Open, 2016, Chapter 4, pp. 63-73. [cited by applicant]
Wielgoss et al., “Mutation Rate Inferred From Synonymous Substitutions in a Long-Term Evolution Experiment in [cited by applicant]
Zhang, et al, “Efficient and Transgene-Free Genome Editing in Wheat Through Transient Expression of CRISPR/Cas9 DNA or RNA”, Nature Communication, 7:12617, Aug. 25, 2016, pp. 1-8. [cited by applicant]
Bortesi et al., “The CRISPR/Cas9 System for Plant Genome Editing and Beyond”, Biotechnology Advances, 2015, pp. 41-52, vol. 33, No. 1. [cited by applicant]
Burgess et al., “Advances in Understanding Cis Regulation of the Plant Gene with Emphasis on Comparative Genomics”, Current Opinion in Plant Biology, 2015, pp. 141-147, vol. 27. [cited by applicant]
Chakarov et al., “DNA Damage and Mutation: Types of DNA Damage”, BioDiscovery, Feb. 23, 2014, pp. 1-43, vol. 11, e8957. [cited by applicant]
ERISdb: a Database of Plant Splice Sites downloaded from <http://lemur.amu.edu.pl/share/ERISdb/home.html> on Mar. 2, 2020. [cited by applicant]
Extended European Search Report for EP Application 18744149.8 dated Jul. 31, 2020. [cited by applicant]
Gil-Humanes et al., “High-Efficiency Gene Targeting in Hexaploid Wheat Using DNA Replicons and CRISPR/Cas9”, The Plant Journal, 2017, pp. 1251-1262, vol. 89. [cited by applicant]
He et al., “Improved Regulatory Element Prediction Based on Tissue-Specific Local Epigenomic Signatures”, PNAS, 2017, pp. 1633-1640. [cited by applicant]
Liang et al., “Efficient DNA-free Genome Editing of Bread Wheatusing CRISPR/Cas9 Ribonucleoprotein Complexes”, Nature Communications, Oct. 6, 2016, pp. 1-5, vol. 8. [cited by applicant]
Lynch, “Evolution of the Mutation Rate”, Trends in Genetics, Jun. 30, 2010, pp. 345-352, vol. 26, No. 8. [cited by applicant]
MaizeGDB Gene Record Page: Zm0000 1d045450, <<https://www.maizegdb.org/gene_center/gene/Zm00001d045450>> , retrieved Oct. 26, 2020, 3 pages. [cited by applicant]
Office Action for U.S. Appl. No. 16/146,871 dated Mar. 20, 2020. [cited by applicant]
Svitashev et al (Targeted Mutagenesis, Precise Gene Editing, and Site-Specific Gene Insertion in Maize Using Cas9 and Guide RNA. Plant Physiology, vol. 169, pp. 931-945. 2015. [cited by applicant]
Richardson et al (Enhancing homology-directed genome editing by catalytically active and inactive CRISPR-Cas9 using asymmetric donor DNA. Nature Biotechnology, 339-344, published on-line Jan. 20, 2016. [cited by applicant]
Zhang et al (The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation. Plant Biotechnology Journal 12, pp. 797-807. 2014. [cited by applicant]
Lieber et al (The Mechanism of Double-Strand DNA Break Repair by the Nonhomologous DNA End Joining Pathway. Annu Rev Biochem, p. 1-34. 2010. [cited by applicant]
Collonnier et al., “Towards mastering CRISPR-induced gene knock-in in plants: Survey of key features and focus on the model Physcomitrella patens”, Methods, vols. 121-122, pp. 103-117, 2017. [cited by applicant]
Lyznik et al., “Double-Strand Break-Induced Targeted Mutagenesis in Plants”, Methods in Molecular Biology, vol. 347, pp. 399-416, 2012. [cited by applicant]
Ma, et al., “A Robust CRISPR/Cas9 System for Convenient, High-Efficiency Multiplex Genome Editing in Monocot and Dicot Plants”, Molecular Plant, vol. 8, pp. 1274-1284, Aug. 2015. [cited by applicant]
Intellectual Property Office of Singapore, “Second Written Opinion” in connection with Application No. 11201906795S, Application Filing Date Jan. 29, 2018, Date of Second Written Opinion Apr. 22, 2021, 8 pages. [cited by applicant]
Intellectual Property Office of Singapore, “Search Report” in connection with Application No. 112019067955, Application Filing Date Jan. 29, 2018, Date of Search Report Oct. 22, 2020, 3 pages. [cited by applicant]
Intellectual Property Office of Singapore, “Written Opinion” in connection with Application No. 112019067955, Application Filing Date Jan. 29, 2018, Date of Written Opinion Oct. 22, 2020, 10 pages. [cited by applicant]
AGRIS [cited by applicant]
Buchanan et al., “Phylogenetic Analysis of 5′-Noncoding Regions From the ABA-Responsive rab16/17 Gene Family of Sorghum, Maize and Rice Provides Insight Into the Composition, Organization and Function of cis-Regulatory … [cited by applicant]
Burstein et al., “New CRISPR-Cas Systems from Uncultivated Microbes”, Nature, Feb. 9, 2017, pp. 237-241, vol. 542, No. 7640. [cited by applicant]
Clasen et al., “Improving Cold Storage and Processing Traits in Potato Through Targeted Gene Knockout”, Plant Biotechnology Journal, 2015, pp. 169-176, vol. 14. [cited by applicant]
Cong et al., “Multiplex Genome Engineering Using CRISPR/Cas Systems”, Science, Feb. 15, 2013, pp. 819-823, vol. 339, No. 6121. [cited by applicant]
Dong et al., “Pod Shattering Resistance Associated with Domestication is Mediated by a NAC Gene in Soybean”, Nature Communications, 2014, pp. 1-11, vol. 5, No. 3352. [cited by applicant]
Fattash et al., “Miniature Inverted-Repeat Transposable Elements: Discovery, Distribution, and Activity”, Genome, 2013, pp. 475-486, vol. 56. [cited by applicant]
Fauser et al., “Both CRISPR/Cas-Based Nucleases and Nickases Can Be Used Efficiently for Genome Engineering in [cited by applicant]
Ferré-D'-Amaré et al., “Small Self-Cleaving Ribozymes”, 2010, Cold Spring Harbor Perspectives Biol., pp. 1-10. [cited by applicant]
Giraldo et al., “Plant Nanobionics Approach to Augment Photosynthesis and Biochemical Sensing”, Nature Materials, 2014, pp. 1-20, doi:10.1038/NMAT3890. [cited by applicant]
Hendel et al, “Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells”, Nat Biotechnol., Sep. 2015, pp. 985-989, vol. 33, No. 9. [cited by applicant]
Ishige et al., “A G-box Motif (GCCACGTGCC) Tetramer Confers High-Level Constitutive Expression in Dicot and Monocot Plants”, The Plant Journal, 1999, pp. 443-448, vol. 18, No. 4. [cited by applicant]
Je et al., “Signaling from Maize Organ Primordia Via Fasciated EAR3 Regulates Stem Cell Proliferation and Yield Traits”, Nature Genetics, Jul. 2016, pp. 785-791, vol. 48, No. 7. [cited by applicant]
Kagale et al., “EAR Motif-Mediated Transcriptional Repression in Plants”, Epigenetics, 2011, pp. 141-146, vol. 6, No. 2. [cited by applicant]
Kim et al., “Genome Sequence of the Hot Pepper Provides Insights into the Evolution of Pungency in [cited by applicant]
Komorl et al, “Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage”, Nature, Oct. 20, 2016, pp. 420-424, vol. 533, No. 7603. [cited by applicant]
Kurai et al., “Introduction of the ZmDof1 Gene Into Rice Enhances Carbon and Nitrogen Assimilation Under Low-Nitrogen Conditions”, Plant Biotechnology Journal, 2011, pp. 826-837, vol. 9. [cited by applicant]
Liu et al, “C2c1-sgRNA Complex Structure Reveals RNA-Guided DNA Cleavage Mechanism”, Molecular Cell, Jan. 19, 2017, pp. 310-322, vol. 65, Elsevier Inc. [cited by applicant]
Mahfouz et al, “TALE nucleases and next generation GM Crops”, GM Crops, Jun. 2011, pp. 99-103, vol. 2, No. 2, Landes Bioscience. [cited by applicant]
Mahfouz et al., “De Novo-Engineered Transcription Activator-Like Effector (TALE) Hybrid Nuclease with Novel DNA Binding Specificity Creates Double-Strand Breaks”, PNAS, Feb. 8, 2011, pp. 2623-2628, vol. 108, No. 6. [cited by applicant]
Maizegdb, Maize B73 RefGen_v4, <<https://www.maizegdb.org/gbrowse?name=GRMZM2G118950>> , retrieved Oct. 26, 2020, 3 pages. [cited by applicant]
Maruthachalam et al., “How to Make Haploid [cited by applicant]
Medrano et al., “From Leaf to Whole-Plant Water Use Efficiency (WUE) in Complex Canopies: Limitations of Leaf WUE as a Selection Target”, The Crop Journal, 2015, pp. 220-228, vol. 3. [cited by applicant]
Molla et al., “Tissue-Specific Expression of Arabidopsis NPR1 Gene in Rice for Sheath Blight Resistance without Compromising Phenotypic Cost”, Plant Science, 2016, pp. 105-114, vol. 250. [cited by applicant]
Mout et al., “Direct Cytosolic Delivery of CRISPR/Cas9-Ribonucleoprotein for Efficient Gene Editing”, ACS Nano, 2017, pp. 2452-2458, vol. 11. [cited by applicant]
Newman et al., “DST Sequences, Highly Conserved Among Plant SAUR Genes, Target Reporter Transcripts for Rapid Decay in Tobacco”, The Plant Cell, Jun. 1993, pp. 701-714, vol. 5. [cited by applicant]
Oka et al., “Genome-Wide Mapping of Transcriptional Enhancer Candidates Using DNA and Chromatin Features in Maize”, Genome Biology, 2017, pp. 1-24, vol. 18, No. 137. [cited by applicant]
Oliveira et al., “Overexpression of Cytosolic Glutamine Synthetase. Relation to Nitrogen, Light, and Photorespiration”, Plant Physiology, 2002, pp. 1170-1180, vol. 129. [cited by applicant]
Pajerowska-Mukhtar et al, “The HSF-like Transcription Factor TBF1 Is a Major Molecular Switch for Plant Growth-to-Defense Transition”, Jan. 24, 2012, pp. 103-112, vol. 22, No. 2, Elsevier Ltd. [cited by applicant]
Quilis et al., “The [cited by applicant]
Ran et al, “Genome engineering using the CRISPR-Cas 9 system”, Nat Protoc., Nov. 2013, pp. 2281-2308, vol. 8, No. 11. [cited by applicant]
Ravi et al, “A haploid genetics toolbox for [cited by applicant]
RiceGE: Rice Functional Genomic Express Database, Rice ( [cited by applicant]
Shmakov et al, “Discovery and functional characterization of diverse Class 2 CRISPR-Cas systems”, Mol. Cell., Nov. 5, 2015, pp. 385-397, vol. 60, No. 3. [cited by applicant]
Sun et al., “Silencing of DND1 in Potato and Tomato Impedes Conidial Germination, Attachment and Hyphal Growth in Botrytis Cinerea”, BMC Plant Biology, 2017, pp. 1-12, vol. 17, No. 235. [cited by applicant]
Sun et al., “Silencing of Six Susceptibility Genes Results in Potato Late Blight Resistance”, Transgenic Research, 2016, pp. 731-742, vol. 25. [cited by applicant]
Ulmasov et al., “Aux/IAA Proteins Repress Expression of Reporter Genes Containing Natural and Highly Active Synthetic Auxin Response Elements”, The Plant Cell, 1997, pp. 1963-1971, vol. 9. [cited by applicant]
UniProt Sequence Accession A0A1D6HA42 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProt Sequence Accession B4FIM5 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
UniProt Sequence Accession B4FV06 for Maize; retrieved from the internet site <https://uniprot.org/uniprot/> on Oct. 4, 2020. [cited by applicant]
Extended European Search Report in EP21873582.7, mailed Jul. 26, 2024, 7 pages. [cited by applicant]
United States Utility Patent eGrant in U.S. Pat. No. 12,188,031, patented Jan. 7, 2025, 29 pages. [cited by applicant]