IP Library Granted Patent US 10,571,467
Granted Patent B2
US 10,571,467 · App. 15/486,072 · Granted Feb 25, 2020

Methods for prediction of anti-TNFα drug levels and autoantibody formation

Inventors: Sharat Singh (San Diego, CA); Venkateswarlu Kondragunta (San Diego, CA)
Assignee: Prometheus Biosiences, Inc.
G01N33/564G01N33/5091G01N33/6869G01N33/94G01N2333/5421G01N2333/5434G01N2800/065G01N2800/52
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 10,571,467
App. No.
15/486,072
Granted
Feb 25, 2020
Kind
B2
Abstract

In some aspects, the present invention provides methods for predicting whether a subject will develop autoantibodies to an anti-TNFα drug during the course of anti-TNFα drug therapy. In other aspects, the present invention provides methods for predicting the level of an anti-TNFα drug in a subject during the course of anti-TNFα drug therapy. Systems for predicting anti-TNFα drug levels and the likelihood of autoantibody formation during the course of anti-TNFα drug therapy are also provided herein. The present invention further provides methods for predicting a clinical outcome (e.g., endoscopic response) of a subject on anti-TNFα drug therapy.

Claims (13)

1. A method for predicting a clinical outcome of a subject in response to therapy with an anti-TNFα drug, the method comprising measuring predictor variables comprising the level of IL12p40 or the level of IL-8, and the level of the anti-TNFα drug, in a sample obtained from the subject at least 2 weeks following induction with the anti-TNFα drug;

comparing the predictor variables to a reference level for each predictor variable;

predicting whether the subject will not have the clinical outcome in response to therapy with the anti-TNFα drug, based on the measured level of each predictor variable compared to the reference level for each predictor variable; and

administering an anti-IL-8 drug or an anti-IL-12p40 drug to the subject when the subject is predicted to not have the clinical outcome in response to therapy with the anti-TNFα drug.

2. The method of claim 1 , wherein the subject has ulcerative colitis (UC).

3. The method of claim 1 , wherein the clinical outcome comprises an endoscopic response.

4. The method of claim 1 , wherein the method comprises measuring the level of IL12p40 and the level of IL-8 in the sample.

5. The method of claim 1 , wherein the sample is obtained from the subject at week 2 following the induction with the anti-TNFα drug.

6. The method of claim 1 , wherein the clinical outcome is at week 8 following the induction with the anti-TNFα drug.

7. The method of claim 1 , wherein the method further comprises applying a statistical analysis on the predictor variables.

8. The method of claim 7 , wherein a clinical outcome is predicted based upon the statistical analysis.

9. The method of claim 1 , wherein the clinical outcome is at about 8-16 weeks following the induction with the anti-TNFα drug.

10. The method of claim 1 , wherein the sample is obtained from the subject at about 2-6 weeks following the induction with the anti-TNFα drug.

Assignments (9)
CORRECTIVE ASSIGNMENT TO CORRECT THE THE ASSIGNEE'S NAME PREVIOUSLY RECORDED AT REEL: 056932 FRAME: 0447. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Jul 5, 2022
From: PROMETHEUS BIOSCIENCES, INC.
To: PROMETHEUS LABORATORIES INC.
Reel/Frame 060574/0453 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 21, 2021
From: PROMETHEUS BIOSCIENCES, INC.
To: PROMETHEUS BIOSCIENCES, INC.; PROMETHEUS LABORATORIES INC.
Reel/Frame 056932/0444 →
CORRECTIVE ASSIGNMENT TO CORRECT THE PATENT NUMBER 16062921 PREVIOUSLY RECORDED ON REEL 049391 FRAME 0756. ASSIGNOR(S) HEREBY CONFIRMS THE PATENT NUMBER SHOULD HAVE BEEN 16062912. Recorded Jul 3, 2020
From: NESTEC S.A.
To: SOCIÉTÉ DES PRODUITS NESTLÉ S.A.
Reel/Frame 054082/0165 →
CORRECTIVE ASSIGNMENT TO CORRECT THE PATENT NUMBER 16062921 PREVIOUSLY RECORDED ON REEL 049391 FRAME 0756. ASSIGNOR(S) HEREBY CONFIRMS THE PATENT NUMBER SHOULD HAVE BEEN 16062912. Recorded Jul 3, 2020
From: NESTEC S.A.
To: SOCIÉTÉ DES PRODUITS NESTLÉ S.A.
Reel/Frame 054082/0001 →
CHANGE OF NAME Recorded Oct 17, 2019
From: PRECISION IBD, INC.
To: PROMETHEUS BIOSCIENCES, INC.
Reel/Frame 050886/0942 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 26, 2019
From: SOCIÉTÉ DES PRODUITS NESTLÉ S.A.
To: PRECISION IBD, INC.
Reel/Frame 050166/0001 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ENGLISH TRANSLATION TO SHOW THE FULL AND CORRECT NEW NAME IN SECTION 51. PREVIOUSLY RECORDED AT REEL: 049391 FRAME: 0756. ASSIGNOR(S) HEREBY CONFIRMS THE MERGER. Recorded Jun 13, 2019
From: NESTEC S.A.
To: SOCIÉTÉ DES PRODUITS NESTLÉ S.A.
Reel/Frame 049853/0398 →
MERGER Recorded Jun 6, 2019
From: NESTEC S.A.
To: SOCIÉTÉ DES PRODUITS NESTLÉ S.A.
Reel/Frame 049391/0756 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 16, 2017
From: SINGH, SHARAT; KONDRAGUNTA, VENKATESWARLU
To: NESTEC S.A.
Reel/Frame 044156/0623 →
Continuity (4)
Continuation PCTIB2015058048 · Oct 19, 2015
Provisional Application 62065997 · Oct 20, 2014
Provisional Application 62086103 · Dec 1, 2014
Related Publication 20170315117A1 · Nov 2, 2017
Cited By (5)
US 12,215,147 US 12,329,801 US 12,358,963 US 12,391,752 US 12,525,318