US 4318846A
· Khanna et al.
· 1982
[cited by applicant]
US 4663161A
· Mannino et al.
· 1987
[cited by applicant]
US 4757141A
· Fung et al.
· 1988
[cited by applicant]
US 4797368A
· Carter et al.
· 1989
[cited by applicant]
US 4849336A
· Miyoshi et al.
· 1989
[cited by applicant]
US 4871488A
· Mannino et al.
· 1989
[cited by applicant]
US 4945050A
· Sanford et al.
· 1990
[cited by applicant]
US 5036006A
· Sanford et al.
· 1991
[cited by applicant]
US 5066580A
· Lee
· 1991
[cited by applicant]
US 5067805A
· Corle et al.
· 1991
[cited by applicant]
US 5091519A
· Cruickshank
· 1992
[cited by applicant]
US 5100792A
· Sanford et al.
· 1992
[cited by applicant]
US 5135855A
· Moss et al.
· 1992
[cited by applicant]
US 5139941A
· Muzyczka et al.
· 1992
[cited by applicant]
US 5151507A
· Hobbs, Jr. et al.
· 1992
[cited by applicant]
US 5173414A
· Lebkowski et al.
· 1992
[cited by applicant]
US 5179022A
· Sanford et al.
· 1993
[cited by applicant]
US 5188934A
· Menchen et al.
· 1993
[cited by applicant]
US 5198537A
· Huber et al.
· 1993
[cited by applicant]
US 5219740A
· Miller et al.
· 1993
[cited by applicant]
US 5344757A
· Hoeltke et al.
· 1994
[cited by applicant]
US 5354657A
· Holtke et al.
· 1994
[cited by applicant]
US 5366860A
· Bergot et al.
· 1994
[cited by applicant]
US 5371015A
· Sanford et al.
· 1994
[cited by applicant]
US 5387742A
· Cordell
· 1995
[cited by applicant]
US 5399346A
· Anderson et al.
· 1995
[cited by applicant]
US 5478744A
· Sanford et al.
· 1995
[cited by applicant]
US 5535052A
· Jorgens
· 1996
[cited by applicant]
US 5538871A
· Nuovo et al.
· 1996
[cited by applicant]
US 5580859A
· Felgner et al.
· 1996
[cited by applicant]
US 5589466A
· Felgner et al.
· 1996
[cited by applicant]
US 5612818A
· Kumagai et al.
· 1997
[cited by applicant]
US 5619371A
· Pontius
· 1997
[cited by examiner]
US 5676950A
· Small, Jr. et al.
· 1997
[cited by applicant]
US 5688648A
· Mathies et al.
· 1997
[cited by applicant]
US 5702888A
· Holtke et al.
· 1997
[cited by applicant]
US 5789245A
· Dubensky, Jr. et al.
· 1998
[cited by applicant]
US 5831005A
· Zuckerman et al.
· 1998
[cited by applicant]
US 5843723A
· Dubensky, Jr. et al.
· 1998
[cited by applicant]
US 5847162A
· Lee et al.
· 1998
[cited by applicant]
US 5990479A
· Weiss et al.
· 1999
[cited by applicant]
US 6054274A
· Sampson et al.
· 2000
[cited by applicant]
US 6094300A
· Kashima et al.
· 2000
[cited by applicant]
US 6207392B1
· Weiss et al.
· 2001
[cited by applicant]
US 6235502B1
· Weissman et al.
· 2001
[cited by applicant]
US 6251303B1
· Bawendi et al.
· 2001
[cited by applicant]
US 6291187B1
· Kingsmore et al.
· 2001
[cited by applicant]
US 6316229B1
· Lizardi et al.
· 2001
[cited by applicant]
US 6319426B1
· Bawendi et al.
· 2001
[cited by applicant]
US 6322901B1
· Bawendi et al.
· 2001
[cited by applicant]
US 6323009B1
· Lasken et al.
· 2001
[cited by applicant]
US 6344329B1
· Lizardi
· 2002
[cited by applicant]
US 6368801B1
· Faruqi
· 2002
[cited by applicant]
US 6423551B1
· Weiss et al.
· 2002
[cited by applicant]
US 6426513B1
· Bawendi et al.
· 2002
[cited by applicant]
US 6444143B2
· Bawendi et al.
· 2002
[cited by applicant]
US 6558928B1
· Landegren
· 2003
[cited by applicant]
US 6566118B1
· Atkinson et al.
· 2003
[cited by applicant]
US 6576291B2
· Bawendi et al.
· 2003
[cited by applicant]
US 6596535B1
· Carter
· 2003
[cited by applicant]
US 6649811B2
· Pasinetti
· 2003
[cited by applicant]
US 6989264B2
· Atkinson et al.
· 2006
[cited by applicant]
US 6995006B2
· Atkinson et al.
· 2006
[cited by applicant]
US 7335898B2
· Donders et al.
· 2008
[cited by applicant]
US 7632679B2
· Jessell et al.
· 2009
[cited by applicant]
US 8497069B2
· Hutchison et al.
· 2013
[cited by applicant]
US 8834546B2
· Deisseroth et al.
· 2014
[cited by applicant]
US 9175095B2
· Deisseroth et al.
· 2015
[cited by applicant]
US 9279973B2
· Takaya
· 2016
[cited by examiner]
US 9359449B2
· Deisseroth et al.
· 2016
[cited by applicant]
US 9365628B2
· Deisseroth et al.
· 2016
[cited by applicant]
US 9376717B2
· Gao et al.
· 2016
[cited by applicant]
US 9423601B2
· Toda et al.
· 2016
[cited by applicant]
US 9458208B2
· Deisseroth et al.
· 2016
[cited by applicant]
US 9791409B2
· Gordon et al.
· 2017
[cited by applicant]
US 9969783B2
· Deisseroth et al.
· 2018
[cited by applicant]
US RE47983E
· Gao et al.
· 2020
[cited by applicant]
US RE49304E
· Gao et al.
· 2022
[cited by applicant]
US 20020045045A1
· Adams et al.
· 2002
[cited by applicant]
US 20030017264A1
· Treadway et al.
· 2003
[cited by applicant]
US 20050112639A1
· Wang et al.
· 2005
[cited by applicant]
US 20050239184A1
· Ohara et al.
· 2005
[cited by applicant]
US 20060141501A1
· Friend et al.
· 2006
[cited by applicant]
US 20080124735A1
· Schuster et al.
· 2008
[cited by applicant]
US 20090093403A1
· Zhang et al.
· 2009
[cited by applicant]
US 20100055733A1
· Lutolf et al.
· 2010
[cited by applicant]
US 20120003657A1
· Myllykangas et al.
· 2012
[cited by applicant]
US 20130178372A1
· Geiss et al.
· 2013
[cited by applicant]
US 20140162892A1
· Mir
· 2014
[cited by applicant]
US 20160169923A1
· Holmes et al.
· 2016
[cited by applicant]
US 20180094320A1
· Li
· 2018
[cited by applicant]
US 20180208975A1
· Peterson et al.
· 2018
[cited by applicant]
US 20190085383A1
· Church et al.
· 2019
[cited by applicant]
US 20210238662A1
· Bava et al.
· 2021
[cited by applicant]
US 20210293693A1
· Bharadwaj et al.
· 2021
[cited by applicant]
US 20210340621A1
· Daugharthy et al.
· 2021
[cited by applicant]
US 20210388424A1
· Bava
· 2021
[cited by applicant]
US 20220016624A1
· Daugharthy et al.
· 2022
[cited by applicant]
US 20220084628A1
· Shah
· 2022
[cited by applicant]
US 20220290228A1
· Hauling et al.
· 2022
[cited by applicant]
US 20220316004A1
· Miller et al.
· 2022
[cited by applicant]
US 20220364160A1
· Nolan et al.
· 2022
[cited by applicant]
US 20220372570A1
· Costa
· 2022
[cited by applicant]
US 20220380838A1
· Kühnemund et al.
· 2022
[cited by applicant]
US 20220403458A1
· Bava
· 2022
[cited by applicant]
US 20230012607A1
· Kühnemund et al.
· 2023
[cited by applicant]
US 20230013775A1
· Chen et al.
· 2023
[cited by applicant]
US 20230026886A1
· Chen
· 2023
[cited by applicant]
US 20230037182A1
· Bava et al.
· 2023
[cited by applicant]
US 20230081232A1
· Weisenfeld et al.
· 2023
[cited by applicant]
US 20230109070A1
· Richman et al.
· 2023
[cited by applicant]
US 20230227894A1
· Nilsson et al.
· 2023
[cited by applicant]
US 20230238078A1
· Gonzalez Lozano et al.
· 2023
[cited by applicant]
US 20230242974A1
· Costa et al.
· 2023
[cited by applicant]
US 20230314327A1
· Hoffman
· 2023
[cited by applicant]
US 20230314328A1
· Costa
· 2023
[cited by applicant]
US 20230323437A1
· Chen et al.
· 2023
[cited by applicant]
US 20230324421A1
· Zhang et al.
· 2023
[cited by applicant]
US 20230351619A1
· Tentori et al.
· 2023
[cited by applicant]
US 20240019353A1
· Wang et al.
· 2024
[cited by applicant]
US 20240033743A1
· Tentori et al.
· 2024
[cited by applicant]
US 20240132938A1
· Kühnemund
· 2024
[cited by applicant]
US 20240150816A1
· Feng et al.
· 2024
[cited by applicant]
US 20240167081A1
· Bava et al.
· 2024
[cited by applicant]
US 20240177348A1
· Shutov et al.
· 2024
[cited by applicant]
US 20240209346A1
· Shastry
· 2024
[cited by applicant]
US 20240233415A1
· Hoffman
· 2024
[cited by applicant]
US 20240248038A1
· Deisseroth et al.
· 2024
[cited by applicant]
US 20240254553A1
· Deisseroth et al.
· 2024
[cited by applicant]
US 20240254554A1
· Deisseroth et al.
· 2024
[cited by applicant]
US 20240257912A1
· Deisseroth et al.
· 2024
[cited by applicant]
US 20240263228A1
· Deisseroth et al.
· 2024
[cited by applicant]
US 20240294973A1
· Wang et al.
· 2024
[cited by applicant]
US 20240305314A1
· Hoffman et al.
· 2024
[cited by applicant]
US 20240369471A1
· Hoffman et al.
· 2024
[cited by applicant]
US 20240376530A1
· Wang et al.
· 2024
[cited by applicant]
US 20250012786A1
· Skrynnyk et al.
· 2025
[cited by applicant]
US 20250052979A1
· Miller et al.
· 2025
[cited by applicant]
Abbott, Jeffrey. et al. A nanoelectrode array for obtaining intracellular recordings from thousands of connected neurons. Nature biomedical engineering 4(2):232-241 (2020).
[cited by applicant]
Achim, Kaia et al. High-throughput spatial mapping of single-cell RNA-seq data to tissue of origin. Nature biotechnology 33(5):503-509 (2015).
[cited by applicant]
Arganda-Carreras, Ignacio. et al. Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification. Bioinformatics 33(15):2424-2426 (2017).
[cited by applicant]
Bagasra, Omar. Protocols for the in situ PCR-amplification and detection of mRNA and DNA sequences. Nature Protocols 2(11):2782-2795 (2007).
[cited by applicant]
Baner, Johan. et al. Signal amplification of padlock probes by rolling circle replication. Nucleic acids research 26(22):5073-5078 (1998).
[cited by applicant]
Becht, Etienne. et al. Dimensionality reduction for visualizing single-cell data using UMAP. Nature biotechnology 37(1):38-44 (2019).
[cited by applicant]
Bleton, Heloise. et al. Cognitive Tasks and Cerebral Blood Flow Through Anterior Cerebral Arteries: a Study via Functional Transcranial Doppler Ultrasound Recordings. BMC Medical Imaging 16:1-12 (2016).
[cited by applicant]
Boersma, Sanne. et al. Multi-color single-molecule imaging uncovers extensive heterogeneity in mRNA decoding. Cell 178(2):458-472, e1-e19 (2019).
[cited by applicant]
Burke, Kelly S. et al. A Fluorescence in situ hybridization method to quantify mRNA translation by visualizing ribosome-mRNA interactions in single cells. ACS central science 3(5):425-433 (2017).
[cited by applicant]
Buxbaum, Adina R. et al. In the right place at the right time: visualizing and understanding mRNA localization. Nature reviews Molecular cell biology 16(2):95-109 (2015).
[cited by applicant]
Cao, Junyue. et al. The single-cell transcriptional landscape of mammalian organogenesis. Nature 566(7745):496-502 (2019).
[cited by applicant]
Chen, Fei. et al. Nanoscale imaging of RNA with expansion microscopy. Nature methods 13(8):679-684 (2016).
[cited by applicant]
Chen, Fei. et al. Optical imaging. Expansion microscopy. Science 347(6221):543-548 (2015).
[cited by applicant]
Chen, Kok Hao. et al. Spatially resolved, highly multiplexed RNA profiling in single cells. Science 348(6233):aaa6090, 1-14 (2015).
[cited by applicant]
Chen, Xiaoyin. et al. Efficient in situ barcode sequencing using padlock probe-based BaristaSeq. Nucleic acids research 46(4):e22, 1-10 (2018).
[cited by applicant]
Chen, Xiaoyin. et al. High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing. Cell 179(3):772-786 (2019).
[cited by applicant]
Clausson, Carl-Magnus. et al. Compaction of rolling circle amplification products increases signal integrity and signal-to-noise ratio. Scientific reports 5:12317, 1-10 (2015).
[cited by applicant]
Codeluppi, Simone. et al. Spatial organization of the somatosensory cortex revealed by osmFISH. Nature methods 15(11):932-935 (2018).
[cited by applicant]
Co-pending U.S. Appl. No. 18/682,160, inventors Xiao; Wang et al., filed Feb. 8, 2024.
[cited by applicant]
Crosetto, Nicola. et al. Spatially resolved transcriptomics and beyond. Nature Reviews Genetics 16(1):57-66 (2015).
[cited by applicant]
Deng, Ruijie. et al. DNA-Sequence-Encoded Rolling Circle Amplicon for Single-Cell RNA Imaging. Chem 4(6):1373-1386 (2018).
[cited by applicant]
Eng, Chee-Huat Linus. et al. Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+. Nature 568(7751):235-239 (2019).
[cited by applicant]
Faruqi, Fawad A. et al. High-throughput genotyping of single nucleotide polymorphisms with rolling circle amplification. BMC genomics 2:4, 1-10 (2001).
[cited by applicant]
Fazal, Furqan M. et al. Atlas of subcellular RNA localization revealed by APEX-Seq. Cell 178(2):473-490, e1-e26 (2019).
[cited by applicant]
Fredriksson, Simon. et al. Protein detection using proximity-dependent DNA ligation assays. Nature biotechnology 20(5):473-477 (2002).
[cited by applicant]
Gao, Shuai. et al. Tracing the temporal-spatial transcriptome landscapes of the human fetal digestive tract using single-cell RNA-sequencing. Nature cell biology 20(6):721-734 (2018).
[cited by applicant]
Goltsev, Yury. et al. Deep Profiling of Mouse Splenic Architecture with CODEX Multiplexed Imaging. Cell 174(4):968-981, e1-e15 (2018).
[cited by applicant]
Halstead, James M. et al. An RNA biosensor for imaging the first round of translation from single cells to living animals. Science 347(6228):1367-1371 (2015).
[cited by applicant]
Han, Xiaoping. et al. Mapping the Mouse Cell Atlas by Microwell-Seq. Cell 172(5):1091-1107, e1-e17 (2018).
[cited by applicant]
Hendriks, Gert-Jan. et al. NASC-seq monitors RNA synthesis in single cells. Nature communications 10(1):3138, 1-9 (2019).
[cited by applicant]
Hrvatin, Sinisa. et al. Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex. Nature neuroscience 21(1):120-129 (2018).
[cited by applicant]
Ingolia, Nicholas T. Ribosome footprint profiling of translation throughout the genome. Cell 165(1):22-33 (2016).
[cited by applicant]
Katz, Zachary B. et al. Mapping translation‘hot-spots’ in live cells by tracking single molecules of mRNA and ribosomes. Elife 5:e10415, 1-16 (2016).
[cited by applicant]
Ke, Rongqin et al. In Situ Sequencing for RNA Analysis in Preserved Tissue and Cells. Nature Methods 10(9):857-860 (2013).
[cited by applicant]
Keller, Philipp J. et al. Visualizing whole-brain activity and development at the single-cell level using light-sheet microscopy. Neuron 85(3):462-483 (2015).
[cited by applicant]
Kishi, Jocelyn Y. et al. SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues. Nature methods 16(6):533-544 (2019).
[cited by applicant]
Koos, Bjorn. et al. Analysis of protein interactions in situ by proximity ligation assays. Current Topics in Microbiology and Immunology 377:111-126 (2014).
[cited by applicant]
Larsson, Chatarina. et al. In situ detection and genotyping of individual mRNA molecules. Nat Methods 7(5):395-397 (2010).
[cited by applicant]
Lee, Je Hyuk. et al. Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues. Nature protocols 10(3):442-458 (2015).
[cited by applicant]
Lee, Je Hyuk. et al. Highly multiplexed subcellular RNA sequencing in situ. Science 343(6177):1360-1363 (2014).
[cited by applicant]
Lein, Ed. et al. The promise of spatial transcriptomics for neuroscience in the era of molecular cell typing. Science 358(6359):64-69 (2017).
[cited by applicant]
Lizardi, Paul M. et al. Mutation Detection and Single-molecule Counting Using Isothermal Rolling-circle Amplification. Nature Genetics 19(3):225-232 (1998).
[cited by applicant]
Lubeck, Eric, and Long Cai. et al. Single-cell systems biology by super-resolution imaging and combinatorial labeling. Nature Methods 9(7):743-748 (2012).
[cited by applicant]
Moffitt, Jeffrey R. et al. Molecular spatial and functional single-cell profiling of the hypothalamic preoptic region. Science 362(6416): eaau5324, 1-14 (2018).
[cited by applicant]
Mondal, Manas. et al. Highly multiplexed single-cell in situ RNA and DNA analysis with bioorthogonal cleavable fluorescent oligonucleotides. Chemical science 9(11):2909-2917 (2018).
[cited by applicant]
Moon, Kevin R. et al. Visualizing structure and transitions in high-dimensional biological data. Nature biotechnology 37(12):1482-1492 (2019).
[cited by applicant]
Morisaki, Tatsuya. et al. Real-time quantification of single RNA translation dynamics in living cells. Science 352(6292):1425-1429 (2016). With Supplemental Materials.
[cited by applicant]
Nawy, Tal. In situ sequencing. Nature Methods 11(1):29 (2014).
[cited by applicant]
PCT/US2019/025835 International Search Report dated Jul. 1, 2019.
[cited by applicant]
PCT/US2020/055800 International Search Report and Written Opinion dated Feb. 22, 2021.
[cited by applicant]
PCT/US2022/030232 International Search Report and Written Opinion dated Oct. 26, 2022.
[cited by applicant]
PCT/US2022/030321 International Search Report and Written Opinion dated Oct. 6, 2022.
[cited by applicant]
PCT/US2022/030363 International Search Report and Written Opinion dated Sep. 1, 2022.
[cited by applicant]
PCT/US2022/030370 International Search Report and Written Opinion dated Sep. 1, 2022.
[cited by applicant]
PCT/US2022/030374 International Search Report and Written Opinion dated Sep. 1, 2022.
[cited by applicant]
PCT/US2024/046583 International Search Report and Written Opinion dated Jan. 2, 2025.
[cited by applicant]
PCT/US2024/060469 International Search Report and Written Opinion dated May 7, 2025.
[cited by applicant]
PCT/US2025/018783 International Search Report and Written Opinion dated Jun. 27, 2025.
[cited by applicant]
Perkel, Jeffrey M. Starfish enterprise: finding RNA patterns in single cells. Nature 572(7770):549-549 (2019).
[cited by applicant]
Player, Audrey N. et al. Single-copy gene detection using branched DNA (bDNA) in situ hybridization. The journal of histochemistry and cytochemistry 49(5):603-612 (2001).
[cited by applicant]
Qian, Xiaoyan. et al. Probabilistic cell typing enables fine mapping of closely related cell types in situ. Nature methods 17(1):101-106 (2020).
[cited by applicant]
Ren, Jingyi. et al. Spatiotemporally resolved transcriptomics reveals the subcellular RNA kinetic landscape. Nature Methods 20(5):695-705 (2023).
[cited by applicant]
Rosales, Adrianne M., and Kristi S. Anseth. The design of reversible hydrogels to capture extracellular matrix dynamics. Nature Reviews Materials 1(2):15012, 1-15 (2016).
[cited by applicant]
Sakaue-Sawano, Asako. et al. Visualizing spatiotemporal dynamics of multicellular cell-cycle progression. Cell 132(3):487-498 (2008).
[cited by applicant]
Schweitzer, Barry. et al. Immunoassays with rolling circle DNA amplification: a versatile platform for ultrasensitive antigen detection. Proceedings of the National Academy of Sciences 97(18):10113-10119 (2000).
[cited by applicant]
Schweitzer, Barry. et al. Multiplexed protein profiling on microarrays by rolling-circle amplification. Nature biotechnology 20(4):359-365 (2002).
[cited by applicant]
Shah, Sheel. et al. seqFISH accurately detects transcripts in single cells and reveals robust spatial organization in the hippocampus. Neuron 94(4):752-758, e1 (2017).
[cited by applicant]
Shah, Sheel. et al. Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing. Development 143(15):2862-2867 (2016).
[cited by applicant]
Soderberg, Ola. et al. Direct observation of individual endogenous protein complexes in situ by proximity ligation. Nature methods 3(12):995-1000 (2006).
[cited by applicant]
Stahl, Patrik L. et al. Visualization and analysis of gene expression in tissue sections by spatial transcriptomics. Science 353(6294):78-82 (2016).
[cited by applicant]
Strell, Carina. et al. Placing RNA in context and space—methods for spatially resolved transcriptomics. The FEBS journal 286(8):1468-1481 (2019).
[cited by applicant]
Tam, Roger Y. et al. Engineering cellular microenvironments with photo- and enzymatically responsive hydrogels: toward biomimetic 3D cell culture models. Accounts of chemical research 50(4):703-713 (2017).
[cited by applicant]
Toga, Arthur W. et al. Towards multimodal atlases of the human brain. Nature Reviews Neuroscience 7(12):952-966 (2006).
[cited by applicant]
Tom Dieck, Susanne. et al. Direct visualization of newly synthesized target proteins in situ. Nature methods 12(5):411-414 (2015).
[cited by applicant]
Tomer, Raju. et al. Advanced Clarity for rapid and high-resolution imaging of intact tissues. Nature protocols 9(7):1682-1697 (2014).
[cited by applicant]
Wang, Guiping. et al. Spatial organization of the transcriptome in individual neurons. BioRxiv :1-45 (2020).
[cited by applicant]
Wang, Xiao. et al. Supplementary Material: Three-dimensional Intact-tissue Sequencing of Single-cell Transcriptional States. Science 361(6400):eaat5691, 1-39 (2018).
[cited by applicant]
Wang, Xiao. et al. Three-dimensional intact-tissue sequencing of single-cell transcriptional states. Science 361(6400):eaat5691, 1-11 (2018).
[cited by applicant]
Weber, Michael. et al. Cell-accurate optical mapping across the entire developing heart. Elife 6:e28307, 1-14 (2017).
[cited by applicant]
Weibrecht, Irene. et al. In situ detection of individual mRNA molecules and protein complexes or post-translational modifications using padlock probes combined with the in situ proximity ligation assay. Nature protocols…
[cited by applicant]
Weibrecht, Irene. et al. Visualising individual sequence-specific protein-DNA interactions in situ. New biotechnology 29(5):589-598 (2012).
[cited by applicant]
Wetmur, James G. DNA probes: applications of the principles of nucleic acid hybridization. Critical Reviews in Biochemistry and Molecular Biology 26(3-4):227-259 (1991).
[cited by applicant]
Wu et al., (2016) “Translation dynamaics of single mRNAs in live cells and neurons”, Science, 352(6292):14300-14305.
[cited by applicant]
Xia, Chenglong. et al. Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression. Proceedings of the National Academy of Sciences 116(39):19490-1949…
[cited by applicant]
Yang, Bin. et al. Single-cell phenotyping within transparent intact tissue through whole-body clearing. Cell 158(4):945-958 (2014).
[cited by applicant]
Zeisel, Amit. et al. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq. Science 347(6226):1138-1142 (2015).
[cited by applicant]
Zeng, Hu. et al. Integrative in situ mapping of single-cell transcriptional states and tissue histopathology in a mouse model of Alzheimer's disease. Nature neuroscience 26(3):430-446 (2023).
[cited by applicant]
Zhang, Beibei. et al. Detection of nucleic acids with a novel stem-loop primer rolling circle amplification technique. Biotechniques 64(2):69-80 (2018).
[cited by applicant]
Zhang, Wei. et al. Proximity-dependent Assay for Specific RNA-protein Interactions in Intact Cells. RNA 22(11):1785-1792 (2016).
[cited by applicant]
Zhong, Xiao-bo. et al. Visualization of oligonucleotide probes and point mutations in interphase nuclei and DNA fibers using rolling circle DNA amplification. Proceedings of the National Academy of Sciences 98(7):3940-3…
[cited by applicant]