IP Library Granted Patent US 8,481,712
Granted Patent B2
US 8,481,712 · App. 11/701,682 · Granted Jul 9, 2013

Nucleoside derivatives as inhibitors of RNA-dependent RNA viral polymerase

Inventors: Balkrishen Bhat (Carlsbad, CA); Anne B. Eldrup (Encinitas, CA); Thazha P. Prakash (Carlsbad, CA); Phillip Dan Cook (Fallbrook, CA); Robert L. LaFemina (Schwenksville, PA); Amy L. Simcoe (Collegeville, PA); Carrie A. Rutkowski (Lansdale, PA); Mario A. Valenciano (Scotch Plains, NJ)
Assignees: Merck Sharp & Dohme Corp.; ISIS Pharmaceuticals, Inc.
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Quick Facts
Patent No.
US 8,481,712
App. No.
11/701,682
Granted
Jul 9, 2013
Kind
B2
Abstract

The present invention provides nucleoside compounds and certain derivatives thereof which are inhibitors of RNA-dependent RNA viral polymerase. These compounds are inhibitors of RNA-dependent RNA viral replication and are useful for the treatment of RNA-dependent RNA viral infection. They are particularly useful as inhibitors of hepatitis C virus (HCV) NS5B polymerase, as inhibitors of HCV replication, and/or for the treatment of hepatitis C infection. The invention also describes pharmaceutical compositions containing such nucleoside compounds alone or in combination with other agents active against RNA-dependent RNA viral infection, in particular HCV infection. Also disclosed are methods of inhibiting RNA-dependent RNA polymerase, inhibiting RNA-dependent RNA viral replication, and/or treating RNA-dependent RNA viral infection with the nucleoside compounds of the present invention.

Claims (83)

1. A compound having the formula:

or a pharmaceutically acceptable salt thereof,

wherein:

B is:

L is CH or N;

E is N or CR 5 ;

W is O or S;

R 1 is C 2-4 alkenyl, C 2-4 alkynyl, or C 1-4 alkyl optionally substituted with amino, hydroxy, or 1 to 3 fluorine atoms; R 3 is hydroxy or C 1-4 alkoxy; and R 2 is selected from the group consisting of

halogen,

C 1-4 alkyl, optionally substituted with 1 to 3 fluorine atoms,

C 1-10 alkoxy, optionally substituted with C 1-3 alkoxy or 1 to 3 fluorine atoms,

C 2-6 alkenyloxy,

C 1-4 alkylthio,

C 1-8 alkylcarbonyloxy,

aryloxycarbonyl,

azido,

amino,

C 1-4 alkylamino, and

di(C 1-4 alkyl)amino;

R 4 and R 6 are each independently H, OH, SH, NH 2 , C 1-4 alkylamino, di(C 1-4 alkyl)amino, C 3-6 cycloalkylamino, halogen, C 1-4 alkyl, C 1-4 alkoxy, or CF 3 ;

R 5 is H, C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 1-4 alkylamino, CF 3 , or halogen;

R 12 and R 13 are each independently hydrogen or methyl.

2. A compound having the formula:

or a pharmaceutically acceptable salt thereof,

wherein:

B is:

L is CH or N;

E is N or CR 5 ;

W is O or S;

R 1 is C 2-4 alkenyl, C 2-4 alkynyl, or C 1-4 alkyl optionally substituted with amino, hydroxy, or 1 to 3 fluorine atoms; R 3 is hydroxy or C 1-4 alkoxy; and R 2 is selected from the group consisting of

halogen,

C 1-4 alkyl, optionally substituted with 1 to 3 fluorine atoms,

C 1-10 alkoxy, optionally substituted with C 1-3 alkoxy or 1 to 3 fluorine atoms,

C 2-6 alkenyloxy,

C 1-4 alkylthio,

C 1-8 alkylcarbonyloxy,

aryloxycarbonyl,

azido,

amino,

C 1-4 alkylamino, and

di(C 1-4 alkyl)amino;

R 4 and R 6 are each independently H, OH, SH, NH 2 , C 1-4 alkylamino, di(C 1-4 alkyl)amino, C 3-6 cycloalkylamino, halogen, C 1-4 alkyl, C 1-4 alkoxy, or CF 3 ;

R 5 is H, C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 1-4 alkylamino, CF 3 , or halogen;

and

R 12 and R 13 are each independently hydrogen or methyl.

3. A compound having the formula:

or a pharmaceutically acceptable salt or thereof,

wherein:

B is:

L is CH or N;

E is N or CR 5 ;

W is O or S;

R 1 is C 2-4 alkenyl, C 2-4 alkynyl, or C 1-4 alkyl optionally substituted with amino, hydroxy, or 1 to 3 fluorine atoms; R 3 is hydroxy or C 1-4 alkoxy; and R 2 is selected from the group consisting of

halogen,

C 1-4 alkyl, optionally substituted with 1 to 3 fluorine atoms,

C 1-10 alkoxy, optionally substituted with C 1-3 alkoxy or 1 to 3 fluorine atoms,

C 2-6 alkenyloxy,

C 1-4 alkylthio,

C 1-8 alkylcarbonyloxy,

aryloxycarbonyl,

azido,

amino,

C 1-4 alkylamino, and

di(C 1-4 alkyl)amino;

R 4 and R 6 are each independently H, OH, SH, NH 2 , C 1-4 alkylamino, di(C 1-4 alkyl)amino, C 3-6 cycloalkylamino, halogen, C 1-4 alkyl, C 1-4 alkoxy, or CF 3 ;

R 5 is H, C 1-6 alkyl, C 2-6 alkenyl, C 2-6 alkynyl, C 1-4 alkylamino, CF 3 , or halogen;

and

R 12 and R 13 are each independently hydrogen or methyl.

4. The compound of claim 1 , wherein B is:

5. The compound of claim 1 , wherein B is:

6. The compound of claim 2 , wherein B is:

7. The compound of claim 2 , wherein B is:

8. The compound of claim 3 , wherein B is:

9. A compound having the formula:

or a pharmaceutically acceptable salt thereof,

wherein:

B is

Y is P 3 O 9 H 4 or P 2 O 6 H 3 ;

R 1 is C 1-4 alkyl;

R 2 is fluoro;

R 3 is OH or C 1-4 alkoxy.

10. The compound of claim 9 , or a pharmaceutically acceptable salt thereof, wherein Y is P 3 O 9 H 4 .

11. The compound of claim 9 , or a pharmaceutically acceptable salt thereof, wherein Y is P 2 O 6 H 3 .

Assignments (5)
MERGER Recorded Aug 8, 2022
From: MERCK SHARP & DOHME CORP.
To: MERCK SHARP & DOHME LLC
Reel/Frame 061102/0145 →
CHANGE OF NAME Recorded Jun 28, 2017
From: ISIS PHARMACEUTICALS, INC.
To: IONIS PHARMACEUTICALS, INC.
Reel/Frame 043029/0338 →
CHANGE OF NAME Recorded Aug 29, 2012
From: SCHERING CORPORATION
To: MERCK SHARP & DOHME CORP.
Reel/Frame 028866/0511 →
MERGER Recorded Aug 27, 2012
From: MERCK SHARP & DOHME CORP.
To: SCHERING CORPORATION
Reel/Frame 028850/0515 →
CHANGE OF NAME Recorded Jan 26, 2010
From: MERCK & CO., INC.
To: MERCK SHARP & DOHME CORP.
Reel/Frame 023906/0803 →
Continuity (9)
Continuation 11643464 · Dec 21, 2006
Continuation 11200499 · Aug 9, 2005
Continuation 10431657 · May 7, 2003
Division 10052318 · Jan 18, 2002
Provisional Application 60263313 · Jan 22, 2001
Provisional Application 60282069 · Apr 6, 2001
Provisional Application 60299320 · Jun 19, 2001
Provisional Application 60344528 · Oct 25, 2001
Related Publication 20120165515A1 · Jun 28, 2012