Image processing of digital slide images based on a macro
Method, systems, and media for processing a digital slide image. In an embodiment, an identification of a macro, representing a plurality of algorithms, and an identification of digital slide image(s) are received over a network. Parameter data is obtained for the identified macro, and the digital slide image(s) are retrieved. The plurality of algorithms represented by the identified macro are executed on the digital slide image(s) according to the parameter data.
1. A computer-implemented method for processing a digital slide image, the method comprising, by at least one hardware processor:
receiving an identification of a macro over at least one network, wherein the macro represents a plurality of algorithms;
receiving an identification of one or more digital slide images over the at least one network;
obtaining one or more parameter data for the identified macro;
retrieving the one or more digital slide images; and
executing the plurality of algorithms, represented by the identified macro, on the one or more digital slide images according to the one or more parameter data.
2. The method of claim 1 , further comprising, prior to receiving the identification of the macro, creating the macro, wherein creating the macro comprises:
receiving an identification of each of the plurality of algorithms from a user over the at least one network;
generating the macro from the identified plurality of algorithms received from the user; and
storing the macro for subsequent retrieval.
3. The method of claim 2 , wherein creating the macro further comprises:
prior to receiving the identification of the macro,
receiving at least a first portion of the one or more parameter data, and
storing the at least a first portion of the one or more parameter data in association with the macro for subsequent retrieval;
wherein obtaining the one or more parameter data for the macro comprises retrieving the stored at least a first portion of the one or more parameter data based on the identification of the macro.
4. The method of claim 3 , wherein obtaining the one or more parameter data further comprises, after receiving the identification of the macro, prompting a user to provide a second portion of the one or more parameter data.
5. The method of claim 1 , further comprising, after receiving the identification of the macro and prior to executing the plurality of algorithms:
determining what parameter data is required to execute the plurality of algorithms;
prompting a user for at least a portion of the parameter data that is determined to be required; and,
in response to the prompting, receiving at least a portion of the one or more parameter data from the user over the at least one network.
6. The method of claim 1 , wherein the identification of the macro and the identification of the one or more digital slide images are received from a user over the at least one network.
7. The method of claim 1 , wherein the identification of the macro and the identification of the one or more digital slide images are received from an automated program over the at least one network.
8. The method of claim 1 , further comprising dynamically linking one or more stored subroutines into at least one of the plurality of algorithms at a time of executing the at least one algorithm.
9. The method of claim 1 , wherein two or more of the plurality of algorithms are run in parallel with each other.
10. The method of claim 1 , further comprising down-sampling at least one of the one or more digital slide images from a higher resolution to a lower resolution prior to executing at least one of the plurality of algorithms, and wherein the at least one algorithm is executed on the at least one down-sampled digital slide image.
11. A system for processing a digital slide image, the system comprising:
at least one hardware processor; and
one or more executable modules that, when executed by the at least one hardware processor,
receive an identification of a macro over at least one network, wherein the macro represents a plurality of algorithms,
receive an identification of one or more digital slide images over the at least one network,
obtain one or more parameter data for the identified macro,
retrieve the one or more digital slide images, and
execute the plurality of algorithms, represented by the identified macro, on the one or more digital slide images according to the one or more parameter data.
12. The system of claim 11 , wherein the one or more executable modules further, prior to receiving the identification of the macro, create the macro, wherein creating the macro comprises:
receiving an identification of each of the plurality of algorithms from a user over the at least one network;
generating the macro from the identified plurality of algorithms received from the user; and
storing the macro for subsequent retrieval.
13. The system of claim 12 , wherein creating the macro further comprises:
prior to receiving the identification of the macro,
receiving at least a first portion of the one or more parameter data, and
storing the at least a first portion of the one or more parameter data in association with the macro for subsequent retrieval;
wherein obtaining the one or more parameter data for the macro comprises retrieving the stored at least a first portion of the one or more parameter data based on the identification of the macro.
14. The system of claim 13 , wherein obtaining the one or more parameter data further comprises, after receiving the identification of the macro, prompting a user to provide a second portion of the one or more parameter data.
15. The system of claim 11 , wherein the one or more executable modules further, after receiving the identification of the macro and prior to executing the plurality of algorithms:
determine what parameter data is required to execute the plurality of algorithms;
prompt a user for at least a portion of the parameter data that is determined to be required; and,
in response to the prompting, receive at least a portion of the one or more parameter data from the user over the at least one network.
16. The system of claim 11 , wherein the identification of the macro and the identification of the one or more digital slide images are received from a user over the at least one network.
17. The system of claim 11 , wherein the identification of the macro and the identification of the one or more digital slide images are received from an automated program over the at least one network.
18. The system of claim 11 , wherein the one or more executable modules further dynamically link one or more stored subroutines into at least one of the plurality of algorithms at a time of executing the at least one algorithm.
19. The system of claim 11 , wherein the one or more executable modules further down-sample at least one of the one or more digital slide images from a higher resolution to a lower resolution prior to executing at least one of the plurality of algorithms, and wherein the at least one algorithm is executed on the at least one down-sampled digital slide image.
20. A non-transitory computer-readable medium having instructions stored thereon, wherein the instructions, when executed by a processor, cause the processor to:
receive an identification of a macro over at least one network, wherein the macro represents a plurality of algorithms;
receive an identification of one or more digital slide images over the at least one network;
obtain one or more parameter data for the identified macro;
retrieve the one or more digital slide images; and
execute the plurality of algorithms, represented by the identified macro, on the one or more digital slide images according to the one or more parameter data.